RNA–Protein interactions for RNA: ENST00000517041.1

RNU1-117P-201, Transcript of RNA, U1 small nuclear 117, pseudogene, humanhuman

BASIC

Gene RNU1-117P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-117P-201ENST00000517041 TMC2Q8TDI7 906 aa5.54□□□□□ -1.52
RNU1-117P-201ENST00000517041 GPHNQ9NQX3 736 aaPredicted RBP5.54□□□□□ -1.52
RNU1-117P-201ENST00000517041 POTEB2H3BUK9 544 aa5.53□□□□□ -1.52
RNU1-117P-201ENST00000517041 SLC24A1O60721 1099 aa5.53□□□□□ -1.52
RNU1-117P-201ENST00000517041 HAP1P54257 671 aaPredicted RBP5.53□□□□□ -1.52
RNU1-117P-201ENST00000517041 FOXK1P85037 733 aa5.52□□□□□ -1.53
RNU1-117P-201ENST00000517041 SNPHO15079 494 aa5.51□□□□□ -1.53
RNU1-117P-201ENST00000517041 POTEJP0CG39 1038 aa5.51□□□□□ -1.53
RNU1-117P-201ENST00000517041 P3H3Q8IVL6 736 aa5.51□□□□□ -1.53
RNU1-117P-201ENST00000517041 DDX27Q96GQ7 796 aaKnown RBP5.51□□□□□ -1.53
RNU1-117P-201ENST00000517041 NCKAP5LQ9HCH0 1330 aa5.5□□□□□ -1.53
RNU1-117P-201ENST00000517041 TSHZ2Q9NRE2 1034 aa5.5□□□□□ -1.53
RNU1-117P-201ENST00000517041 C2orf72A6NCS6 295 aa5.49□□□□□ -1.53
RNU1-117P-201ENST00000517041 SLC34A2O95436 690 aa5.49□□□□□ -1.53
RNU1-117P-201ENST00000517041 PPP1R15BQ5SWA1 713 aa5.49□□□□□ -1.53
RNU1-117P-201ENST00000517041 SLAIN1Q8ND83 568 aa5.49□□□□□ -1.53
RNU1-117P-201ENST00000517041 OTUD5Q96G74 571 aa5.49□□□□□ -1.53
RNU1-117P-201ENST00000517041 WDR70Q9NW82 654 aa5.49□□□□□ -1.53
RNU1-117P-201ENST00000517041 ARIH1Q9Y4X5 557 aaPredicted RBP5.49□□□□□ -1.53
RNU1-117P-201ENST00000517041 CAMK2BQ13554 666 aa5.48□□□□□ -1.53
RNU1-117P-201ENST00000517041 TMEM92Q6UXU6 159 aa5.48□□□□□ -1.53
RNU1-117P-201ENST00000517041 CADPS2Q86UW7 1296 aa5.48□□□□□ -1.53
RNU1-117P-201ENST00000517041 ZSWIM6Q9HCJ5 1215 aa5.48□□□□□ -1.53
RNU1-117P-201ENST00000517041 RIMBP2O15034 1052 aa5.47□□□□□ -1.53
RNU1-117P-201ENST00000517041 DOK7Q18PE1 504 aa5.47□□□□□ -1.53
RNU1-117P-201ENST00000517041 LARP6Q9BRS8 491 aaKnown RBP5.46□□□□□ -1.54
RNU1-117P-201ENST00000517041 DSG2Q14126 1118 aa5.45□□□□□ -1.54
RNU1-117P-201ENST00000517041 E2F4Q16254 413 aa5.45□□□□□ -1.54
RNU1-117P-201ENST00000517041 PLPP6Q8IY26 295 aa5.45□□□□□ -1.54
RNU1-117P-201ENST00000517041 PTCD2Q8WV60 388 aaKnown RBP5.44□□□□□ -1.54
RNU1-117P-201ENST00000517041 ZNF316A6NFI3 1004 aaPredicted RBP5.43□□□□□ -1.54
RNU1-117P-201ENST00000517041 TBC1D12O60347 775 aa5.43□□□□□ -1.54
RNU1-117P-201ENST00000517041 ARHGEF1Q92888 912 aaKnown RBP5.42□□□□□ -1.54
RNU1-117P-201ENST00000517041 OXER1Q8TDS5 423 aa5.41□□□□□ -1.54
RNU1-117P-201ENST00000517041 KDM2AQ9Y2K7 1162 aa5.41□□□□□ -1.54
RNU1-117P-201ENST00000517041 SPDYE16A6NNV3 312 aaPredicted RBP5.4□□□□□ -1.54
RNU1-117P-201ENST00000517041 HOXB3P14651 431 aaPredicted RBP5.4□□□□□ -1.54
RNU1-117P-201ENST00000517041 ZNF710Q8N1W2 664 aa5.4□□□□□ -1.54
RNU1-117P-201ENST00000517041 PSDA5PKW4 1024 aaPredicted RBP5.39□□□□□ -1.55
RNU1-117P-201ENST00000517041 HOXB1P14653 301 aaPredicted RBP5.38□□□□□ -1.55
RNU1-117P-201ENST00000517041 PDIA6Q15084 440 aa5.38□□□□□ -1.55
RNU1-117P-201ENST00000517041 KCNV2Q8TDN2 545 aa5.38□□□□□ -1.55
RNU1-117P-201ENST00000517041 EMILIN3Q9NT22 766 aa5.37□□□□□ -1.55
RNU1-117P-201ENST00000517041 PCDHGA4Q9Y5G9 962 aa5.37□□□□□ -1.55
RNU1-117P-201ENST00000517041 MAP3K9P80192 1104 aa5.36□□□□□ -1.55
RNU1-117P-201ENST00000517041 GPR153Q6NV75 609 aa5.36□□□□□ -1.55
RNU1-117P-201ENST00000517041 PTGER2P43116 358 aa5.35□□□□□ -1.55
RNU1-117P-201ENST00000517041 ANO8Q9HCE9 1232 aaPredicted RBP5.35□□□□□ -1.55
RNU1-117P-201ENST00000517041 KDM4FA0A1W2PPD8 638 aa5.34□□□□□ -1.55
RNU1-117P-201ENST00000517041 DPYSL4O14531 572 aa5.33□□□□□ -1.56
RNU1-117P-201ENST00000517041 TULP1O00294 542 aaPredicted RBP5.32□□□□□ -1.56
RNU1-117P-201ENST00000517041 ST18O60284 1047 aa5.32□□□□□ -1.56
RNU1-117P-201ENST00000517041 EVI5O60447 810 aa5.32□□□□□ -1.56
RNU1-117P-201ENST00000517041 NBR1Q14596 966 aa5.32□□□□□ -1.56
RNU1-117P-201ENST00000517041 SMYD5Q6GMV2 418 aa5.32□□□□□ -1.56
RNU1-117P-201ENST00000517041 UPF1Q92900 1129 aaKnown RBP eCLIP5.32□□□□□ -1.56
RNU1-117P-201ENST00000517041 JPH4Q96JJ6 628 aa5.32□□□□□ -1.56
RNU1-117P-201ENST00000517041 PHF14O94880 888 aa5.31□□□□□ -1.56
RNU1-117P-201ENST00000517041 EPAS1Q99814 870 aa5.31□□□□□ -1.56
RNU1-117P-201ENST00000517041 ARSIQ5FYB1 569 aa5.3□□□□□ -1.56
RNU1-117P-201ENST00000517041 FBXW7Q969H0 707 aa5.3□□□□□ -1.56
RNU1-117P-201ENST00000517041 BCANQ96GW7 911 aa5.3□□□□□ -1.56
RNU1-117P-201ENST00000517041 NUDT7P0C024 238 aa5.29□□□□□ -1.56
RNU1-117P-201ENST00000517041 PBX2P40425 430 aa5.29□□□□□ -1.56
RNU1-117P-201ENST00000517041 EMP3P54852 163 aa5.29□□□□□ -1.56
RNU1-117P-201ENST00000517041 PPP4R3BQ5MIZ7 849 aa5.29□□□□□ -1.56
RNU1-117P-201ENST00000517041 TESPA1A2RU30 521 aaPredicted RBP5.28□□□□□ -1.56
RNU1-117P-201ENST00000517041 FOSBP53539 338 aa5.28□□□□□ -1.56
RNU1-117P-201ENST00000517041 LCE2DQ5TA82 110 aaPredicted RBP5.28□□□□□ -1.56
RNU1-117P-201ENST00000517041 TYW1BQ6NUM6 668 aa5.27□□□□□ -1.57
RNU1-117P-201ENST00000517041 FAM163AQ96GL9 167 aaPredicted RBP5.27□□□□□ -1.57
RNU1-117P-201ENST00000517041 LHX6Q9UPM6 363 aa5.27□□□□□ -1.57
RNU1-117P-201ENST00000517041 ZDHHC16Q969W1 377 aa5.26□□□□□ -1.57
RNU1-117P-201ENST00000517041 KCNH8Q96L42 1107 aa5.26□□□□□ -1.57
RNU1-117P-201ENST00000517041 PCDH10Q9P2E7 1040 aa5.26□□□□□ -1.57
RNU1-117P-201ENST00000517041 ERBB3P21860 1342 aa5.25□□□□□ -1.57
RNU1-117P-201ENST00000517041 EN1Q05925 392 aaPredicted RBP5.25□□□□□ -1.57
RNU1-117P-201ENST00000517041 CERKQ8TCT0 537 aa5.25□□□□□ -1.57
RNU1-117P-201ENST00000517041 BCL2L12Q9HB09 334 aa5.25□□□□□ -1.57
RNU1-117P-201ENST00000517041 ZNF687Q8N1G0 1237 aa5.24□□□□□ -1.57
RNU1-117P-201ENST00000517041 ZNF454Q8N9F8 522 aa5.24□□□□□ -1.57
RNU1-117P-201ENST00000517041 PCDHGA10Q9Y5H3 936 aa5.24□□□□□ -1.57
RNU1-117P-201ENST00000517041 SEMA3EO15041 775 aa5.23□□□□□ -1.57
RNU1-117P-201ENST00000517041 OSBPP22059 807 aa5.23□□□□□ -1.57
RNU1-117P-201ENST00000517041 KHSRPQ92945 711 aaKnown RBP eCLIP5.23□□□□□ -1.57
RNU1-117P-201ENST00000517041 HS3ST6Q96QI5 342 aa5.23□□□□□ -1.57
RNU1-117P-201ENST00000517041 RBM27Q9P2N5 1060 aaKnown RBP5.23□□□□□ -1.57
RNU1-117P-201ENST00000517041 PTPREP23469 700 aa5.22□□□□□ -1.57
RNU1-117P-201ENST00000517041 VARS2Q5ST30 1063 aaKnown RBP5.22□□□□□ -1.57
RNU1-117P-201ENST00000517041 FAM205CA6NFA0 338 aa5.21□□□□□ -1.58
RNU1-117P-201ENST00000517041 PPP1R3GB7ZBB8 358 aa5.21□□□□□ -1.58
RNU1-117P-201ENST00000517041 ONECUT3O60422 494 aaPredicted RBP5.21□□□□□ -1.58
RNU1-117P-201ENST00000517041 DDX12PQ92771 950 aa5.21□□□□□ -1.58
RNU1-117P-201ENST00000517041 MARVELD3Q96A59 401 aa5.21□□□□□ -1.58
RNU1-117P-201ENST00000517041 SLC4A5Q9BY07 1137 aa5.21□□□□□ -1.58
RNU1-117P-201ENST00000517041 GRXCR2A6NFK2 248 aa5.2□□□□□ -1.58
RNU1-117P-201ENST00000517041 POTEMA6NI47 508 aa5.2□□□□□ -1.58
RNU1-117P-201ENST00000517041 ARHGAP33O14559 1287 aa5.2□□□□□ -1.58
RNU1-117P-201ENST00000517041 MLLT3P42568 568 aaPredicted RBP5.2□□□□□ -1.58
RNU1-117P-201ENST00000517041 POTEGQ6S5H5 508 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms