RNA–Protein interactions for RNA: ENST00000516546.1

RN7SKP287-201, Transcript of RNA, 7SK small nuclear pseudogene 287, humanhuman

BASIC

Gene RN7SKP287, Length 266 nt, Biotype misc RNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP287-201ENST00000516546 C2orf72A6NCS6 295 aa13.34□□□□□ -0.27
RN7SKP287-201ENST00000516546 TMC2Q8TDI7 906 aa13.33□□□□□ -0.28
RN7SKP287-201ENST00000516546 ST18O60284 1047 aa13.32□□□□□ -0.28
RN7SKP287-201ENST00000516546 HOXB3P14651 431 aaPredicted RBP13.31□□□□□ -0.28
RN7SKP287-201ENST00000516546 SPRYD3Q8NCJ5 442 aa13.3□□□□□ -0.28
RN7SKP287-201ENST00000516546 DOK7Q18PE1 504 aa13.27□□□□□ -0.29
RN7SKP287-201ENST00000516546 PAXIP1Q6ZW49 1069 aaPredicted RBP13.26□□□□□ -0.29
RN7SKP287-201ENST00000516546 GPHNQ9NQX3 736 aaPredicted RBP13.26□□□□□ -0.29
RN7SKP287-201ENST00000516546 CFAP44Q96MT7 982 aa13.24□□□□□ -0.29
RN7SKP287-201ENST00000516546 ZNF710Q8N1W2 664 aa13.23□□□□□ -0.29
RN7SKP287-201ENST00000516546 POTEMA6NI47 508 aa13.22□□□□□ -0.29
RN7SKP287-201ENST00000516546 POTEGQ6S5H5 508 aa13.22□□□□□ -0.29
RN7SKP287-201ENST00000516546 CRISPLD2Q9H0B8 497 aa13.22□□□□□ -0.29
RN7SKP287-201ENST00000516546 NCKAP5LQ9HCH0 1330 aa13.21□□□□□ -0.29
RN7SKP287-201ENST00000516546 RIMBP2O15034 1052 aa13.2□□□□□ -0.3
RN7SKP287-201ENST00000516546 FOXK1P85037 733 aa13.2□□□□□ -0.3
RN7SKP287-201ENST00000516546 DSG2Q14126 1118 aa13.19□□□□□ -0.3
RN7SKP287-201ENST00000516546 CADPS2Q86UW7 1296 aa13.19□□□□□ -0.3
RN7SKP287-201ENST00000516546 PDE4AP27815 886 aa13.17□□□□□ -0.3
RN7SKP287-201ENST00000516546 MARVELD3Q96A59 401 aa13.17□□□□□ -0.3
RN7SKP287-201ENST00000516546 ZSWIM6Q9HCJ5 1215 aa13.17□□□□□ -0.3
RN7SKP287-201ENST00000516546 PLPP6Q8IY26 295 aa13.16□□□□□ -0.3
RN7SKP287-201ENST00000516546 HOXB1P14653 301 aaPredicted RBP13.15□□□□□ -0.3
RN7SKP287-201ENST00000516546 SLC34A2O95436 690 aa13.13□□□□□ -0.31
RN7SKP287-201ENST00000516546 GPR153Q6NV75 609 aa13.13□□□□□ -0.31
RN7SKP287-201ENST00000516546 LARP6Q9BRS8 491 aaKnown RBP13.13□□□□□ -0.31
RN7SKP287-201ENST00000516546 EMP3P54852 163 aa13.12□□□□□ -0.31
RN7SKP287-201ENST00000516546 PPP1R15BQ5SWA1 713 aa13.12□□□□□ -0.31
RN7SKP287-201ENST00000516546 ARSIQ5FYB1 569 aa13.1□□□□□ -0.31
RN7SKP287-201ENST00000516546 DDX27Q96GQ7 796 aaKnown RBP13.09□□□□□ -0.31
RN7SKP287-201ENST00000516546 MFSD10Q14728 455 aa13.08□□□□□ -0.32
RN7SKP287-201ENST00000516546 PCDHGA4Q9Y5G9 962 aa13.07□□□□□ -0.32
RN7SKP287-201ENST00000516546 PTCD2Q8WV60 388 aaKnown RBP13.06□□□□□ -0.32
RN7SKP287-201ENST00000516546 KHSRPQ92945 711 aaKnown RBP eCLIP13.06□□□□□ -0.32
RN7SKP287-201ENST00000516546 FAM205CA6NFA0 338 aa13.03□□□□□ -0.32
RN7SKP287-201ENST00000516546 ERBB3P21860 1342 aa13□□□□□ -0.33
RN7SKP287-201ENST00000516546 NUDT7P0C024 238 aa13□□□□□ -0.33
RN7SKP287-201ENST00000516546 HS3ST6Q96QI5 342 aa13□□□□□ -0.33
RN7SKP287-201ENST00000516546 POTEB3A0JP26 581 aa12.99□□□□□ -0.33
RN7SKP287-201ENST00000516546 POTEBQ6S5H4 581 aa12.99□□□□□ -0.33
RN7SKP287-201ENST00000516546 OXER1Q8TDS5 423 aa12.99□□□□□ -0.33
RN7SKP287-201ENST00000516546 PCDH10Q9P2E7 1040 aa12.99□□□□□ -0.33
RN7SKP287-201ENST00000516546 TBC1D12O60347 775 aa12.98□□□□□ -0.33
RN7SKP287-201ENST00000516546 PLCB2Q00722 1185 aa12.98□□□□□ -0.33
RN7SKP287-201ENST00000516546 CDAN1Q8IWY9 1227 aa12.98□□□□□ -0.33
RN7SKP287-201ENST00000516546 UPF1Q92900 1129 aaKnown RBP eCLIP12.98□□□□□ -0.33
RN7SKP287-201ENST00000516546 TSHZ2Q9NRE2 1034 aa12.98□□□□□ -0.33
RN7SKP287-201ENST00000516546 KDM4FA0A1W2PPD8 638 aa12.95□□□□□ -0.34
RN7SKP287-201ENST00000516546 ZNF316A6NFI3 1004 aaPredicted RBP12.95□□□□□ -0.34
RN7SKP287-201ENST00000516546 VARS2Q5ST30 1063 aaKnown RBP12.95□□□□□ -0.34
RN7SKP287-201ENST00000516546 EMILIN3Q9NT22 766 aa12.93□□□□□ -0.34
RN7SKP287-201ENST00000516546 CAMK2BQ13554 666 aa12.92□□□□□ -0.34
RN7SKP287-201ENST00000516546 LHX6Q9UPM6 363 aa12.92□□□□□ -0.34
RN7SKP287-201ENST00000516546 WDR70Q9NW82 654 aa12.88□□□□□ -0.35
RN7SKP287-201ENST00000516546 MAP3K9P80192 1104 aa12.87□□□□□ -0.35
RN7SKP287-201ENST00000516546 ZNF687Q8N1G0 1237 aa12.85□□□□□ -0.35
RN7SKP287-201ENST00000516546 EVI5O60447 810 aa12.83□□□□□ -0.36
RN7SKP287-201ENST00000516546 E2F4Q16254 413 aa12.83□□□□□ -0.36
RN7SKP287-201ENST00000516546 PSDA5PKW4 1024 aaPredicted RBP12.82□□□□□ -0.36
RN7SKP287-201ENST00000516546 KRTAP3-3Q9BYR6 98 aa12.82□□□□□ -0.36
RN7SKP287-201ENST00000516546 KRTAP3-2Q9BYR7 98 aa12.82□□□□□ -0.36
RN7SKP287-201ENST00000516546 DPYSL4O14531 572 aa12.81□□□□□ -0.36
RN7SKP287-201ENST00000516546 ANO8Q9HCE9 1232 aaPredicted RBP12.81□□□□□ -0.36
RN7SKP287-201ENST00000516546 HAP1P54257 671 aaPredicted RBP12.78□□□□□ -0.36
RN7SKP287-201ENST00000516546 PPP4R3BQ5MIZ7 849 aa12.75□□□□□ -0.37
RN7SKP287-201ENST00000516546 ZNF454Q8N9F8 522 aa12.74□□□□□ -0.37
RN7SKP287-201ENST00000516546 ARIH1Q9Y4X5 557 aaPredicted RBP12.73□□□□□ -0.37
RN7SKP287-201ENST00000516546 PBX2P40425 430 aa12.72□□□□□ -0.37
RN7SKP287-201ENST00000516546 FOSBP53539 338 aa12.72□□□□□ -0.37
RN7SKP287-201ENST00000516546 POTEEQ6S8J3 1075 aa12.72□□□□□ -0.37
RN7SKP287-201ENST00000516546 JPH4Q96JJ6 628 aa12.72□□□□□ -0.37
RN7SKP287-201ENST00000516546 PDIA6Q15084 440 aa12.71□□□□□ -0.37
RN7SKP287-201ENST00000516546 AXIN2Q9Y2T1 843 aa12.69□□□□□ -0.38
RN7SKP287-201ENST00000516546 SPDYE16A6NNV3 312 aaPredicted RBP12.68□□□□□ -0.38
RN7SKP287-201ENST00000516546 PLSCR2Q9NRY7 297 aa12.68□□□□□ -0.38
RN7SKP287-201ENST00000516546 ARHGAP33O14559 1287 aa12.67□□□□□ -0.38
RN7SKP287-201ENST00000516546 KCNV2Q8TDN2 545 aa12.67□□□□□ -0.38
RN7SKP287-201ENST00000516546 LSM11P83369 360 aaKnown RBP eCLIP12.66□□□□□ -0.38
RN7SKP287-201ENST00000516546 PCDHGA10Q9Y5H3 936 aa12.66□□□□□ -0.38
RN7SKP287-201ENST00000516546 SPNS2Q8IVW8 549 aa12.65□□□□□ -0.38
RN7SKP287-201ENST00000516546 ZDHHC16Q969W1 377 aa12.65□□□□□ -0.38
RN7SKP287-201ENST00000516546 PTGER2P43116 358 aa12.64□□□□□ -0.39
RN7SKP287-201ENST00000516546 BCL2L12Q9HB09 334 aa12.64□□□□□ -0.39
RN7SKP287-201ENST00000516546 PHF14O94880 888 aa12.63□□□□□ -0.39
RN7SKP287-201ENST00000516546 ANKRD13DQ6ZTN6 518 aa12.63□□□□□ -0.39
RN7SKP287-201ENST00000516546 ARHGEF1Q92888 912 aaKnown RBP12.63□□□□□ -0.39
RN7SKP287-201ENST00000516546 KCNK17Q96T54 332 aa12.63□□□□□ -0.39
RN7SKP287-201ENST00000516546 PSEN2P49810 448 aa12.62□□□□□ -0.39
RN7SKP287-201ENST00000516546 DDX12PQ92771 950 aa12.62□□□□□ -0.39
RN7SKP287-201ENST00000516546 ADAM33Q9BZ11 813 aa12.62□□□□□ -0.39
RN7SKP287-201ENST00000516546 KDM2AQ9Y2K7 1162 aa12.62□□□□□ -0.39
RN7SKP287-201ENST00000516546 TYW1BQ6NUM6 668 aa12.61□□□□□ -0.39
RN7SKP287-201ENST00000516546 P3H3Q8IVL6 736 aa12.61□□□□□ -0.39
RN7SKP287-201ENST00000516546 FBXW7Q969H0 707 aa12.6□□□□□ -0.39
RN7SKP287-201ENST00000516546 KCNH8Q96L42 1107 aa12.6□□□□□ -0.39
RN7SKP287-201ENST00000516546 DMRTA1Q5VZB9 504 aa12.59□□□□□ -0.39
RN7SKP287-201ENST00000516546 EPAS1Q99814 870 aa12.59□□□□□ -0.39
RN7SKP287-201ENST00000516546 PTPREP23469 700 aa12.58□□□□□ -0.4
RN7SKP287-201ENST00000516546 VSIG10Q8N0Z9 540 aa12.57□□□□□ -0.4
RN7SKP287-201ENST00000516546 NBR1Q14596 966 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms