RNA–Protein interactions for RNA: ENST00000516516.1

RNU6-1038P-201, Transcript of RNA, U6 small nuclear 1038, pseudogene, humanhuman

BASIC

Gene RNU6-1038P, Length 104 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1038P-201ENST00000516516 PDE4AP27815 886 aa8.23□□□□□ -1.09
RNU6-1038P-201ENST00000516516 ZNF710Q8N1W2 664 aa8.21□□□□□ -1.1
RNU6-1038P-201ENST00000516516 ZSWIM6Q9HCJ5 1215 aa8.21□□□□□ -1.1
RNU6-1038P-201ENST00000516516 GPHNQ9NQX3 736 aaPredicted RBP8.21□□□□□ -1.1
RNU6-1038P-201ENST00000516516 FAM163AQ96GL9 167 aaPredicted RBP8.2□□□□□ -1.1
RNU6-1038P-201ENST00000516516 KIF3CO14782 793 aa8.19□□□□□ -1.1
RNU6-1038P-201ENST00000516516 PAXIP1Q6ZW49 1069 aaPredicted RBP8.19□□□□□ -1.1
RNU6-1038P-201ENST00000516516 C2orf72A6NCS6 295 aa8.18□□□□□ -1.1
RNU6-1038P-201ENST00000516516 CFAP44Q96MT7 982 aa8.18□□□□□ -1.1
RNU6-1038P-201ENST00000516516 FOXK1P85037 733 aa8.17□□□□□ -1.1
RNU6-1038P-201ENST00000516516 TMEM92Q6UXU6 159 aa8.17□□□□□ -1.1
RNU6-1038P-201ENST00000516516 SLC34A2O95436 690 aa8.15□□□□□ -1.1
RNU6-1038P-201ENST00000516516 CRISPLD2Q9H0B8 497 aa8.15□□□□□ -1.1
RNU6-1038P-201ENST00000516516 TBC1D12O60347 775 aa8.14□□□□□ -1.11
RNU6-1038P-201ENST00000516516 ST18O60284 1047 aa8.13□□□□□ -1.11
RNU6-1038P-201ENST00000516516 HOXB3P14651 431 aaPredicted RBP8.12□□□□□ -1.11
RNU6-1038P-201ENST00000516516 HOXB1P14653 301 aaPredicted RBP8.12□□□□□ -1.11
RNU6-1038P-201ENST00000516516 DDX27Q96GQ7 796 aaKnown RBP8.12□□□□□ -1.11
RNU6-1038P-201ENST00000516516 PCDH10Q9P2E7 1040 aa8.12□□□□□ -1.11
RNU6-1038P-201ENST00000516516 PLPP6Q8IY26 295 aa8.11□□□□□ -1.11
RNU6-1038P-201ENST00000516516 PPP1R15BQ5SWA1 713 aa8.1□□□□□ -1.11
RNU6-1038P-201ENST00000516516 LARP6Q9BRS8 491 aaKnown RBP8.1□□□□□ -1.11
RNU6-1038P-201ENST00000516516 MFSD10Q14728 455 aa8.09□□□□□ -1.11
RNU6-1038P-201ENST00000516516 ZNF316A6NFI3 1004 aaPredicted RBP8.08□□□□□ -1.12
RNU6-1038P-201ENST00000516516 DSG2Q14126 1118 aa8.08□□□□□ -1.12
RNU6-1038P-201ENST00000516516 WDR70Q9NW82 654 aa8.08□□□□□ -1.12
RNU6-1038P-201ENST00000516516 NCKAP5LQ9HCH0 1330 aa8.07□□□□□ -1.12
RNU6-1038P-201ENST00000516516 POTEMA6NI47 508 aa8.07□□□□□ -1.12
RNU6-1038P-201ENST00000516516 EMP3P54852 163 aa8.07□□□□□ -1.12
RNU6-1038P-201ENST00000516516 PLCB2Q00722 1185 aa8.07□□□□□ -1.12
RNU6-1038P-201ENST00000516516 POTEGQ6S5H5 508 aa8.07□□□□□ -1.12
RNU6-1038P-201ENST00000516516 PTCD2Q8WV60 388 aaKnown RBP8.07□□□□□ -1.12
RNU6-1038P-201ENST00000516516 PSDA5PKW4 1024 aaPredicted RBP8.05□□□□□ -1.12
RNU6-1038P-201ENST00000516516 GPR153Q6NV75 609 aa8.05□□□□□ -1.12
RNU6-1038P-201ENST00000516516 PCDHGA4Q9Y5G9 962 aa8.05□□□□□ -1.12
RNU6-1038P-201ENST00000516516 LCE2DQ5TA82 110 aaPredicted RBP8.04□□□□□ -1.12
RNU6-1038P-201ENST00000516516 ERBB3P21860 1342 aa8.03□□□□□ -1.12
RNU6-1038P-201ENST00000516516 ARSIQ5FYB1 569 aa8.01□□□□□ -1.13
RNU6-1038P-201ENST00000516516 CADPS2Q86UW7 1296 aa8.01□□□□□ -1.13
RNU6-1038P-201ENST00000516516 OXER1Q8TDS5 423 aa8.01□□□□□ -1.13
RNU6-1038P-201ENST00000516516 MAP3K9P80192 1104 aa7.99□□□□□ -1.13
RNU6-1038P-201ENST00000516516 CAMK2BQ13554 666 aa7.99□□□□□ -1.13
RNU6-1038P-201ENST00000516516 MARVELD3Q96A59 401 aa7.99□□□□□ -1.13
RNU6-1038P-201ENST00000516516 FAM205CA6NFA0 338 aa7.98□□□□□ -1.13
RNU6-1038P-201ENST00000516516 E2F4Q16254 413 aa7.97□□□□□ -1.13
RNU6-1038P-201ENST00000516516 NUDT7P0C024 238 aa7.96□□□□□ -1.14
RNU6-1038P-201ENST00000516516 HS3ST6Q96QI5 342 aa7.96□□□□□ -1.14
RNU6-1038P-201ENST00000516516 P3H3Q8IVL6 736 aa7.95□□□□□ -1.14
RNU6-1038P-201ENST00000516516 CDAN1Q8IWY9 1227 aa7.95□□□□□ -1.14
RNU6-1038P-201ENST00000516516 UPF1Q92900 1129 aaKnown RBP eCLIP7.95□□□□□ -1.14
RNU6-1038P-201ENST00000516516 TSHZ2Q9NRE2 1034 aa7.95□□□□□ -1.14
RNU6-1038P-201ENST00000516516 VARS2Q5ST30 1063 aaKnown RBP7.94□□□□□ -1.14
RNU6-1038P-201ENST00000516516 KCNH8Q96L42 1107 aa7.94□□□□□ -1.14
RNU6-1038P-201ENST00000516516 ARIH1Q9Y4X5 557 aaPredicted RBP7.94□□□□□ -1.14
RNU6-1038P-201ENST00000516516 SPDYE16A6NNV3 312 aaPredicted RBP7.93□□□□□ -1.14
RNU6-1038P-201ENST00000516516 PBX2P40425 430 aa7.93□□□□□ -1.14
RNU6-1038P-201ENST00000516516 HAP1P54257 671 aaPredicted RBP7.93□□□□□ -1.14
RNU6-1038P-201ENST00000516516 PPP4R3BQ5MIZ7 849 aa7.93□□□□□ -1.14
RNU6-1038P-201ENST00000516516 ZNF687Q8N1G0 1237 aa7.93□□□□□ -1.14
RNU6-1038P-201ENST00000516516 EVI5O60447 810 aa7.92□□□□□ -1.14
RNU6-1038P-201ENST00000516516 ANO8Q9HCE9 1232 aaPredicted RBP7.92□□□□□ -1.14
RNU6-1038P-201ENST00000516516 KDM4FA0A1W2PPD8 638 aa7.91□□□□□ -1.14
RNU6-1038P-201ENST00000516516 LHX6Q9UPM6 363 aa7.91□□□□□ -1.14
RNU6-1038P-201ENST00000516516 KHSRPQ92945 711 aaKnown RBP eCLIP7.9□□□□□ -1.14
RNU6-1038P-201ENST00000516516 EMILIN3Q9NT22 766 aa7.9□□□□□ -1.14
RNU6-1038P-201ENST00000516516 VSIG10Q8N0Z9 540 aa7.89□□□□□ -1.15
RNU6-1038P-201ENST00000516516 ARHGEF1Q92888 912 aaKnown RBP7.88□□□□□ -1.15
RNU6-1038P-201ENST00000516516 JPH4Q96JJ6 628 aa7.88□□□□□ -1.15
RNU6-1038P-201ENST00000516516 FBXW7Q969H0 707 aa7.87□□□□□ -1.15
RNU6-1038P-201ENST00000516516 DPYSL4O14531 572 aa7.86□□□□□ -1.15
RNU6-1038P-201ENST00000516516 PTGER2P43116 358 aa7.86□□□□□ -1.15
RNU6-1038P-201ENST00000516516 PDIA6Q15084 440 aa7.86□□□□□ -1.15
RNU6-1038P-201ENST00000516516 EPAS1Q99814 870 aa7.86□□□□□ -1.15
RNU6-1038P-201ENST00000516516 PHF14O94880 888 aa7.85□□□□□ -1.15
RNU6-1038P-201ENST00000516516 FOSBP53539 338 aa7.85□□□□□ -1.15
RNU6-1038P-201ENST00000516516 ZNF454Q8N9F8 522 aa7.85□□□□□ -1.15
RNU6-1038P-201ENST00000516516 ARHGAP33O14559 1287 aa7.84□□□□□ -1.15
RNU6-1038P-201ENST00000516516 ZDHHC16Q969W1 377 aa7.84□□□□□ -1.15
RNU6-1038P-201ENST00000516516 TYW1BQ6NUM6 668 aa7.83□□□□□ -1.16
RNU6-1038P-201ENST00000516516 POTEB3A0JP26 581 aa7.82□□□□□ -1.16
RNU6-1038P-201ENST00000516516 POTEBQ6S5H4 581 aa7.82□□□□□ -1.16
RNU6-1038P-201ENST00000516516 BCL2L12Q9HB09 334 aa7.82□□□□□ -1.16
RNU6-1038P-201ENST00000516516 PTPREP23469 700 aa7.81□□□□□ -1.16
RNU6-1038P-201ENST00000516516 TK2O00142 265 aa7.79□□□□□ -1.16
RNU6-1038P-201ENST00000516516 LSM11P83369 360 aaKnown RBP eCLIP7.79□□□□□ -1.16
RNU6-1038P-201ENST00000516516 KCNV2Q8TDN2 545 aa7.78□□□□□ -1.16
RNU6-1038P-201ENST00000516516 KRTAP3-3Q9BYR6 98 aa7.78□□□□□ -1.16
RNU6-1038P-201ENST00000516516 KRTAP3-2Q9BYR7 98 aa7.78□□□□□ -1.16
RNU6-1038P-201ENST00000516516 PCDHGA10Q9Y5H3 936 aa7.78□□□□□ -1.16
RNU6-1038P-201ENST00000516516 SMYD5Q6GMV2 418 aa7.77□□□□□ -1.17
RNU6-1038P-201ENST00000516516 SLC4A5Q9BY07 1137 aa7.77□□□□□ -1.17
RNU6-1038P-201ENST00000516516 CERKQ8TCT0 537 aa7.76□□□□□ -1.17
RNU6-1038P-201ENST00000516516 STAC3Q96MF2 364 aa7.76□□□□□ -1.17
RNU6-1038P-201ENST00000516516 ANKRD13DQ6ZTN6 518 aa7.75□□□□□ -1.17
RNU6-1038P-201ENST00000516516 KCNK17Q96T54 332 aa7.75□□□□□ -1.17
RNU6-1038P-201ENST00000516516 PPP1R3GB7ZBB8 358 aa7.74□□□□□ -1.17
RNU6-1038P-201ENST00000516516 NBR1Q14596 966 aa7.74□□□□□ -1.17
RNU6-1038P-201ENST00000516516 DDX12PQ92771 950 aa7.74□□□□□ -1.17
RNU6-1038P-201ENST00000516516 TULP1O00294 542 aaPredicted RBP7.73□□□□□ -1.17
RNU6-1038P-201ENST00000516516 ONECUT3O60422 494 aaPredicted RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms