RNA–Protein interactions for RNA: ENST00000516419.1

SNORA48.9-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 162 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.9-201ENST00000516419 P3H3Q8IVL6 736 aa15.2■□□□□ 0.02
SNORA48.9-201ENST00000516419 LARP6Q9BRS8 491 aaKnown RBP15.2■□□□□ 0.02
SNORA48.9-201ENST00000516419 POTEFA5A3E0 1075 aa15.19■□□□□ 0.02
SNORA48.9-201ENST00000516419 MFSD10Q14728 455 aa15.17■□□□□ 0.02
SNORA48.9-201ENST00000516419 DDX27Q96GQ7 796 aaKnown RBP15.15■□□□□ 0.02
SNORA48.9-201ENST00000516419 GPHNQ9NQX3 736 aaPredicted RBP15.14■□□□□ 0.01
SNORA48.9-201ENST00000516419 NBR1Q14596 966 aa15.13■□□□□ 0.01
SNORA48.9-201ENST00000516419 E2F4Q16254 413 aa15.12■□□□□ 0.01
SNORA48.9-201ENST00000516419 KCNV2Q8TDN2 545 aa15.12■□□□□ 0.01
SNORA48.9-201ENST00000516419 TMC2Q8TDI7 906 aa15.1■□□□□ 0.01
SNORA48.9-201ENST00000516419 PPP1R15BQ5SWA1 713 aa15.06■□□□□ 0
SNORA48.9-201ENST00000516419 FOXK1P85037 733 aa15.03■□□□□ -0
SNORA48.9-201ENST00000516419 ARHGEF1Q92888 912 aaKnown RBP15.03■□□□□ -0
SNORA48.9-201ENST00000516419 C2orf72A6NCS6 295 aa15.02■□□□□ -0
SNORA48.9-201ENST00000516419 KIF3CO14782 793 aa15.02■□□□□ -0
SNORA48.9-201ENST00000516419 CAMK2BQ13554 666 aa15.01□□□□□ -0.01
SNORA48.9-201ENST00000516419 DSG2Q14126 1118 aa15.01□□□□□ -0.01
SNORA48.9-201ENST00000516419 C3orf67Q6ZVT6 689 aa15.01□□□□□ -0.01
SNORA48.9-201ENST00000516419 TMEM92Q6UXU6 159 aa14.98□□□□□ -0.01
SNORA48.9-201ENST00000516419 ARIH1Q9Y4X5 557 aaPredicted RBP14.96□□□□□ -0.01
SNORA48.9-201ENST00000516419 PLPP6Q8IY26 295 aa14.95□□□□□ -0.02
SNORA48.9-201ENST00000516419 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.93□□□□□ -0.02
SNORA48.9-201ENST00000516419 EMILIN3Q9NT22 766 aa14.87□□□□□ -0.03
SNORA48.9-201ENST00000516419 POTEB2H3BUK9 544 aa14.83□□□□□ -0.04
SNORA48.9-201ENST00000516419 POTEJP0CG39 1038 aa14.83□□□□□ -0.04
SNORA48.9-201ENST00000516419 DPYSL4O14531 572 aa14.8□□□□□ -0.04
SNORA48.9-201ENST00000516419 SEMA3EO15041 775 aa14.79□□□□□ -0.04
SNORA48.9-201ENST00000516419 MAMSTRQ6ZN01 415 aa14.79□□□□□ -0.04
SNORA48.9-201ENST00000516419 SPDYE16A6NNV3 312 aaPredicted RBP14.78□□□□□ -0.04
SNORA48.9-201ENST00000516419 TESPA1A2RU30 521 aaPredicted RBP14.77□□□□□ -0.05
SNORA48.9-201ENST00000516419 TULP1O00294 542 aaPredicted RBP14.77□□□□□ -0.05
SNORA48.9-201ENST00000516419 SCUBE2Q9NQ36 999 aa14.77□□□□□ -0.05
SNORA48.9-201ENST00000516419 MAP3K9P80192 1104 aa14.76□□□□□ -0.05
SNORA48.9-201ENST00000516419 OXER1Q8TDS5 423 aa14.76□□□□□ -0.05
SNORA48.9-201ENST00000516419 PDIA6Q15084 440 aa14.74□□□□□ -0.05
SNORA48.9-201ENST00000516419 SLC34A2O95436 690 aa14.73□□□□□ -0.05
SNORA48.9-201ENST00000516419 TPRNQ4KMQ1 711 aa14.73□□□□□ -0.05
SNORA48.9-201ENST00000516419 UPF1Q92900 1129 aaKnown RBP eCLIP14.73□□□□□ -0.05
SNORA48.9-201ENST00000516419 SMYD5Q6GMV2 418 aa14.72□□□□□ -0.05
SNORA48.9-201ENST00000516419 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.71□□□□□ -0.05
SNORA48.9-201ENST00000516419 PTCD2Q8WV60 388 aaKnown RBP14.71□□□□□ -0.05
SNORA48.9-201ENST00000516419 TBC1D12O60347 775 aa14.7□□□□□ -0.06
SNORA48.9-201ENST00000516419 SLAIN1Q8ND83 568 aa14.7□□□□□ -0.06
SNORA48.9-201ENST00000516419 PRKCSHP14314 528 aaPredicted RBP14.67□□□□□ -0.06
SNORA48.9-201ENST00000516419 LMOD2Q6P5Q4 547 aa14.67□□□□□ -0.06
SNORA48.9-201ENST00000516419 MLLT3P42568 568 aaPredicted RBP14.63□□□□□ -0.07
SNORA48.9-201ENST00000516419 EVI5O60447 810 aa14.61□□□□□ -0.07
SNORA48.9-201ENST00000516419 ZNF316A6NFI3 1004 aaPredicted RBP14.6□□□□□ -0.07
SNORA48.9-201ENST00000516419 DOK7Q18PE1 504 aa14.6□□□□□ -0.07
SNORA48.9-201ENST00000516419 PCDHGA4Q9Y5G9 962 aa14.59□□□□□ -0.07
SNORA48.9-201ENST00000516419 PTGER2P43116 358 aa14.58□□□□□ -0.08
SNORA48.9-201ENST00000516419 HOXB3P14651 431 aaPredicted RBP14.56□□□□□ -0.08
SNORA48.9-201ENST00000516419 ANO8Q9HCE9 1232 aaPredicted RBP14.56□□□□□ -0.08
SNORA48.9-201ENST00000516419 LHX8Q68G74 356 aa14.55□□□□□ -0.08
SNORA48.9-201ENST00000516419 RIMBP2O15034 1052 aa14.54□□□□□ -0.08
SNORA48.9-201ENST00000516419 OTUD5Q96G74 571 aa14.54□□□□□ -0.08
SNORA48.9-201ENST00000516419 GRXCR2A6NFK2 248 aa14.53□□□□□ -0.08
SNORA48.9-201ENST00000516419 ZSWIM6Q9HCJ5 1215 aa14.53□□□□□ -0.08
SNORA48.9-201ENST00000516419 SNPHO15079 494 aa14.52□□□□□ -0.09
SNORA48.9-201ENST00000516419 RBM26Q5T8P6 1007 aaKnown RBP14.5□□□□□ -0.09
SNORA48.9-201ENST00000516419 ZNF710Q8N1W2 664 aa14.49□□□□□ -0.09
SNORA48.9-201ENST00000516419 DDX12PQ92771 950 aa14.49□□□□□ -0.09
SNORA48.9-201ENST00000516419 KDM4FA0A1W2PPD8 638 aa14.47□□□□□ -0.09
SNORA48.9-201ENST00000516419 ZC3H15Q8WU90 426 aaKnown RBP14.47□□□□□ -0.09
SNORA48.9-201ENST00000516419 OSBPP22059 807 aa14.46□□□□□ -0.09
SNORA48.9-201ENST00000516419 ARSIQ5FYB1 569 aa14.46□□□□□ -0.09
SNORA48.9-201ENST00000516419 GPR153Q6NV75 609 aa14.46□□□□□ -0.09
SNORA48.9-201ENST00000516419 GPIHBP1Q8IV16 184 aa14.43□□□□□ -0.1
SNORA48.9-201ENST00000516419 PHF14O94880 888 aa14.42□□□□□ -0.1
SNORA48.9-201ENST00000516419 NUDT7P0C024 238 aa14.42□□□□□ -0.1
SNORA48.9-201ENST00000516419 EPAS1Q99814 870 aa14.42□□□□□ -0.1
SNORA48.9-201ENST00000516419 KHSRPQ92945 711 aaKnown RBP eCLIP14.41□□□□□ -0.1
SNORA48.9-201ENST00000516419 JPH4Q96JJ6 628 aa14.38□□□□□ -0.11
SNORA48.9-201ENST00000516419 ZMYND10O75800 440 aa14.37□□□□□ -0.11
SNORA48.9-201ENST00000516419 PCDHGA10Q9Y5H3 936 aa14.37□□□□□ -0.11
SNORA48.9-201ENST00000516419 TYW1BQ6NUM6 668 aa14.36□□□□□ -0.11
SNORA48.9-201ENST00000516419 NUTM2FA1L443 756 aa14.35□□□□□ -0.11
SNORA48.9-201ENST00000516419 HOXB1P14653 301 aaPredicted RBP14.35□□□□□ -0.11
SNORA48.9-201ENST00000516419 PRIM1P49642 420 aaKnown RBP14.35□□□□□ -0.11
SNORA48.9-201ENST00000516419 FOSBP53539 338 aa14.35□□□□□ -0.11
SNORA48.9-201ENST00000516419 EN1Q05925 392 aaPredicted RBP14.34□□□□□ -0.11
SNORA48.9-201ENST00000516419 FBXW7Q969H0 707 aa14.34□□□□□ -0.11
SNORA48.9-201ENST00000516419 BARGINQ6ZT62 677 aa14.32□□□□□ -0.12
SNORA48.9-201ENST00000516419 ZNF454Q8N9F8 522 aa14.31□□□□□ -0.12
SNORA48.9-201ENST00000516419 LHX6Q9UPM6 363 aa14.31□□□□□ -0.12
SNORA48.9-201ENST00000516419 GPR37O15354 613 aa14.3□□□□□ -0.12
SNORA48.9-201ENST00000516419 PSDA5PKW4 1024 aaPredicted RBP14.29□□□□□ -0.12
SNORA48.9-201ENST00000516419 MAP3K7O43318 606 aa14.29□□□□□ -0.12
SNORA48.9-201ENST00000516419 FCHSD2O94868 740 aa14.29□□□□□ -0.12
SNORA48.9-201ENST00000516419 ZDHHC16Q969W1 377 aa14.29□□□□□ -0.12
SNORA48.9-201ENST00000516419 RBM33Q96EV2 1170 aaKnown RBP14.28□□□□□ -0.12
SNORA48.9-201ENST00000516419 SLC24A3Q9HC58 644 aa14.25□□□□□ -0.13
SNORA48.9-201ENST00000516419 PTGDRQ13258 359 aa14.24□□□□□ -0.13
SNORA48.9-201ENST00000516419 HIC1Q14526 733 aa14.24□□□□□ -0.13
SNORA48.9-201ENST00000516419 PPP4R3BQ5MIZ7 849 aa14.24□□□□□ -0.13
SNORA48.9-201ENST00000516419 KRI1Q8N9T8 703 aaKnown RBP14.23□□□□□ -0.13
SNORA48.9-201ENST00000516419 GNPATO15228 680 aa14.22□□□□□ -0.13
SNORA48.9-201ENST00000516419 TSR1Q2NL82 804 aaKnown RBP14.22□□□□□ -0.13
SNORA48.9-201ENST00000516419 CDHR5Q9HBB8 845 aa14.22□□□□□ -0.13
SNORA48.9-201ENST00000516419 C6orf132Q5T0Z8 1188 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms