RNA–Protein interactions for RNA: ENST00000516414.1

RNU6-1049P-201, Transcript of RNA, U6 small nuclear 1049, pseudogene, humanhuman

BASIC

Gene RNU6-1049P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1049P-201ENST00000516414 CHRM1P11229 460 aaPredicted RBP1.38□□□□□ -2.19
RNU6-1049P-201ENST00000516414 EMP3P54852 163 aa1.38□□□□□ -2.19
RNU6-1049P-201ENST00000516414 MKRN3Q13064 507 aaKnown RBP1.38□□□□□ -2.19
RNU6-1049P-201ENST00000516414 PDAP1Q13442 181 aaKnown RBP1.38□□□□□ -2.19
RNU6-1049P-201ENST00000516414 DSG2Q14126 1118 aa1.38□□□□□ -2.19
RNU6-1049P-201ENST00000516414 FAM161AQ3B820 660 aa1.38□□□□□ -2.19
RNU6-1049P-201ENST00000516414 TMEM121BQ9BXQ6 578 aaPredicted RBP1.38□□□□□ -2.19
RNU6-1049P-201ENST00000516414 EMILIN3Q9NT22 766 aa1.38□□□□□ -2.19
RNU6-1049P-201ENST00000516414 EIF2AK3Q9NZJ5 1116 aaKnown RBP1.38□□□□□ -2.19
RNU6-1049P-201ENST00000516414 SMAPO00193 183 aa1.37□□□□□ -2.19
RNU6-1049P-201ENST00000516414 RIOK3O14730 519 aaKnown RBP1.37□□□□□ -2.19
RNU6-1049P-201ENST00000516414 GTPBP6O43824 516 aaPredicted RBP1.37□□□□□ -2.19
RNU6-1049P-201ENST00000516414 COL9A1P20849 921 aa1.37□□□□□ -2.19
RNU6-1049P-201ENST00000516414 NLRP7Q8WX94 980 aa1.37□□□□□ -2.19
RNU6-1049P-201ENST00000516414 SCUBE2Q9NQ36 999 aa1.37□□□□□ -2.19
RNU6-1049P-201ENST00000516414 RTN4Q9NQC3 1192 aaKnown RBP1.37□□□□□ -2.19
RNU6-1049P-201ENST00000516414 FAM198AQ9UFP1 575 aa1.37□□□□□ -2.19
RNU6-1049P-201ENST00000516414 ERBB3P21860 1342 aa1.37□□□□□ -2.19
RNU6-1049P-201ENST00000516414 SLC34A2O95436 690 aa1.36□□□□□ -2.19
RNU6-1049P-201ENST00000516414 PROX2Q3B8N5 592 aa1.36□□□□□ -2.19
RNU6-1049P-201ENST00000516414 PLPP6Q8IY26 295 aa1.36□□□□□ -2.19
RNU6-1049P-201ENST00000516414 TSHZ2Q9NRE2 1034 aa1.36□□□□□ -2.19
RNU6-1049P-201ENST00000516414 PCDHGA4Q9Y5G9 962 aa1.36□□□□□ -2.19
RNU6-1049P-201ENST00000516414 DCAF8L2P0C7V8 631 aa1.35□□□□□ -2.19
RNU6-1049P-201ENST00000516414 HOXB1P14653 301 aaPredicted RBP1.35□□□□□ -2.19
RNU6-1049P-201ENST00000516414 PTPN5P54829 565 aa1.35□□□□□ -2.19
RNU6-1049P-201ENST00000516414 IER5LQ5T953 404 aa1.35□□□□□ -2.19
RNU6-1049P-201ENST00000516414 RBM33Q96EV2 1170 aaKnown RBP1.35□□□□□ -2.19
RNU6-1049P-201ENST00000516414 ZNF316A6NFI3 1004 aaPredicted RBP1.34□□□□□ -2.19
RNU6-1049P-201ENST00000516414 POTECB2RU33 542 aa1.34□□□□□ -2.19
RNU6-1049P-201ENST00000516414 GOLGA2Q08379 1002 aa1.34□□□□□ -2.19
RNU6-1049P-201ENST00000516414 GSE1Q14687 1217 aa1.34□□□□□ -2.19
RNU6-1049P-201ENST00000516414 TSR1Q2NL82 804 aaKnown RBP1.34□□□□□ -2.19
RNU6-1049P-201ENST00000516414 C3orf67Q6ZVT6 689 aa1.34□□□□□ -2.19
RNU6-1049P-201ENST00000516414 ZNF467Q7Z7K2 595 aaPredicted RBP1.34□□□□□ -2.19
RNU6-1049P-201ENST00000516414 NKX2-3Q8TAU0 364 aa1.34□□□□□ -2.19
RNU6-1049P-201ENST00000516414 DDX12PQ92771 950 aa1.34□□□□□ -2.19
RNU6-1049P-201ENST00000516414 SGIP1Q9BQI5 828 aa1.34□□□□□ -2.19
RNU6-1049P-201ENST00000516414 LARP6Q9BRS8 491 aaKnown RBP1.34□□□□□ -2.19
RNU6-1049P-201ENST00000516414 ADAM33Q9BZ11 813 aa1.34□□□□□ -2.19
RNU6-1049P-201ENST00000516414 SEPT9Q9UHD8 586 aaPredicted RBP1.34□□□□□ -2.19
RNU6-1049P-201ENST00000516414 FECHP22830 423 aa1.33□□□□□ -2.2
RNU6-1049P-201ENST00000516414 MLLT3P42568 568 aaPredicted RBP1.33□□□□□ -2.2
RNU6-1049P-201ENST00000516414 ZNF516Q92618 1163 aa1.33□□□□□ -2.2
RNU6-1049P-201ENST00000516414 KCTD12Q96CX2 325 aaKnown RBP1.33□□□□□ -2.2
RNU6-1049P-201ENST00000516414 CDHR5Q9HBB8 845 aa1.33□□□□□ -2.2
RNU6-1049P-201ENST00000516414 FBXO3Q9UK99 471 aa1.33□□□□□ -2.2
RNU6-1049P-201ENST00000516414 DPYSL4O14531 572 aa1.32□□□□□ -2.2
RNU6-1049P-201ENST00000516414 PPEF1O14829 653 aaPredicted RBP1.32□□□□□ -2.2
RNU6-1049P-201ENST00000516414 VGFO15240 615 aaPredicted RBP1.32□□□□□ -2.2
RNU6-1049P-201ENST00000516414 HRO43593 1189 aa1.32□□□□□ -2.2
RNU6-1049P-201ENST00000516414 PLEKHG5O94827 1062 aa1.32□□□□□ -2.2
RNU6-1049P-201ENST00000516414 BCAMP50895 628 aa1.32□□□□□ -2.2
RNU6-1049P-201ENST00000516414 LSM11P83369 360 aaKnown RBP eCLIP1.32□□□□□ -2.2
RNU6-1049P-201ENST00000516414 MAMSTRQ6ZN01 415 aa1.32□□□□□ -2.2
RNU6-1049P-201ENST00000516414 ZNF687Q8N1G0 1237 aa1.32□□□□□ -2.2
RNU6-1049P-201ENST00000516414 ZNF710Q8N1W2 664 aa1.32□□□□□ -2.2
RNU6-1049P-201ENST00000516414 EMID1Q96A84 441 aaPredicted RBP1.32□□□□□ -2.2
RNU6-1049P-201ENST00000516414 L3MBTL3Q96JM7 780 aaPredicted RBP1.32□□□□□ -2.2
RNU6-1049P-201ENST00000516414 CFAP44Q96MT7 982 aa1.32□□□□□ -2.2
RNU6-1049P-201ENST00000516414 KCNK17Q96T54 332 aa1.32□□□□□ -2.2
RNU6-1049P-201ENST00000516414 PCDHGA10Q9Y5H3 936 aa1.32□□□□□ -2.2
RNU6-1049P-201ENST00000516414 SOX12O15370 315 aa1.31□□□□□ -2.2
RNU6-1049P-201ENST00000516414 NLRP6P59044 892 aa1.31□□□□□ -2.2
RNU6-1049P-201ENST00000516414 ZNF454Q8N9F8 522 aa1.31□□□□□ -2.2
RNU6-1049P-201ENST00000516414 OXER1Q8TDS5 423 aa1.31□□□□□ -2.2
RNU6-1049P-201ENST00000516414 CRISPLD2Q9H0B8 497 aa1.31□□□□□ -2.2
RNU6-1049P-201ENST00000516414 DACH1Q9UI36 760 aa1.31□□□□□ -2.2
RNU6-1049P-201ENST00000516414 TSKSQ9UJT2 592 aa1.31□□□□□ -2.2
RNU6-1049P-201ENST00000516414 MYT1LQ9UL68 1186 aa1.31□□□□□ -2.2
RNU6-1049P-201ENST00000516414 KDM2AQ9Y2K7 1162 aa1.31□□□□□ -2.2
RNU6-1049P-201ENST00000516414 GRXCR2A6NFK2 248 aa1.3□□□□□ -2.2
RNU6-1049P-201ENST00000516414 BHMG1C9JSJ3 638 aaPredicted RBP1.3□□□□□ -2.2
RNU6-1049P-201ENST00000516414 EVI5O60447 810 aa1.3□□□□□ -2.2
RNU6-1049P-201ENST00000516414 ADGRD1Q6QNK2 874 aa1.3□□□□□ -2.2
RNU6-1049P-201ENST00000516414 PAXIP1Q6ZW49 1069 aaPredicted RBP1.3□□□□□ -2.2
RNU6-1049P-201ENST00000516414 HLA-CQ95604 372 aa1.3□□□□□ -2.2
RNU6-1049P-201ENST00000516414 RNF166Q96A37 237 aaPredicted RBP1.3□□□□□ -2.2
RNU6-1049P-201ENST00000516414 PHOX2BQ99453 314 aa1.3□□□□□ -2.2
RNU6-1049P-201ENST00000516414 GPHNQ9NQX3 736 aaPredicted RBP1.3□□□□□ -2.2
RNU6-1049P-201ENST00000516414 WBP1LQ9NX94 342 aa1.3□□□□□ -2.2
RNU6-1049P-201ENST00000516414 KIAA1468Q9P260 1216 aa1.3□□□□□ -2.2
RNU6-1049P-201ENST00000516414 VPS9D1Q9Y2B5 631 aa1.3□□□□□ -2.2
RNU6-1049P-201ENST00000516414 FOXK1P85037 733 aa1.29□□□□□ -2.2
RNU6-1049P-201ENST00000516414 PPP1R15BQ5SWA1 713 aa1.29□□□□□ -2.2
RNU6-1049P-201ENST00000516414 LCE2CQ5TA81 110 aa1.29□□□□□ -2.2
RNU6-1049P-201ENST00000516414 HS6ST3Q8IZP7 471 aa1.29□□□□□ -2.2
RNU6-1049P-201ENST00000516414 PTCD2Q8WV60 388 aaKnown RBP1.29□□□□□ -2.2
RNU6-1049P-201ENST00000516414 ZBED2Q9BTP6 218 aa1.29□□□□□ -2.2
RNU6-1049P-201ENST00000516414 NPDC1Q9NQX5 325 aaPredicted RBP1.29□□□□□ -2.2
RNU6-1049P-201ENST00000516414 PLA2G2EQ9NZK7 142 aa1.29□□□□□ -2.2
RNU6-1049P-201ENST00000516414 ZBTB47Q9UFB7 747 aaPredicted RBP1.29□□□□□ -2.2
RNU6-1049P-201ENST00000516414 SEMA3EO15041 775 aa1.28□□□□□ -2.2
RNU6-1049P-201ENST00000516414 OSBPP22059 807 aa1.28□□□□□ -2.2
RNU6-1049P-201ENST00000516414 CLCN6P51797 869 aa1.28□□□□□ -2.2
RNU6-1049P-201ENST00000516414 FOSBP53539 338 aa1.28□□□□□ -2.2
RNU6-1049P-201ENST00000516414 PLA2G2CQ5R387 149 aa1.28□□□□□ -2.2
RNU6-1049P-201ENST00000516414 RBM26Q5T8P6 1007 aaKnown RBP1.28□□□□□ -2.2
RNU6-1049P-201ENST00000516414 FBXO31Q5XUX0 539 aaPredicted RBP1.28□□□□□ -2.2
RNU6-1049P-201ENST00000516414 TMC2Q8TDI7 906 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms