RNA–Protein interactions for RNA: ENST00000516409.1

SCARNA15.2-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.2-201ENST00000516409 TRPC6Q9Y210 931 aa6.2□□□□□ -1.42
SCARNA15.2-201ENST00000516409 DPYSL4O14531 572 aa6.18□□□□□ -1.42
SCARNA15.2-201ENST00000516409 TRIM66O15016 1216 aa6.18□□□□□ -1.42
SCARNA15.2-201ENST00000516409 CD44P16070 742 aaKnown RBP6.18□□□□□ -1.42
SCARNA15.2-201ENST00000516409 MKRN3Q13064 507 aaKnown RBP6.18□□□□□ -1.42
SCARNA15.2-201ENST00000516409 PIP4P2Q8N4L2 257 aa6.18□□□□□ -1.42
SCARNA15.2-201ENST00000516409 PDE4DQ08499 809 aa6.17□□□□□ -1.42
SCARNA15.2-201ENST00000516409 EMILIN3Q9NT22 766 aa6.17□□□□□ -1.42
SCARNA15.2-201ENST00000516409 MS4A3Q96HJ5 214 aa6.16□□□□□ -1.42
SCARNA15.2-201ENST00000516409 GPHNQ9NQX3 736 aaPredicted RBP6.16□□□□□ -1.42
SCARNA15.2-201ENST00000516409 GPR37O15354 613 aa6.14□□□□□ -1.43
SCARNA15.2-201ENST00000516409 DSG2Q14126 1118 aa6.14□□□□□ -1.43
SCARNA15.2-201ENST00000516409 PDIA6Q15084 440 aa6.14□□□□□ -1.43
SCARNA15.2-201ENST00000516409 CHRDL2Q6WN34 429 aa6.14□□□□□ -1.43
SCARNA15.2-201ENST00000516409 ZMYND15Q9H091 742 aa6.14□□□□□ -1.43
SCARNA15.2-201ENST00000516409 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.14□□□□□ -1.43
SCARNA15.2-201ENST00000516409 UBTFP17480 764 aaKnown RBP6.13□□□□□ -1.43
SCARNA15.2-201ENST00000516409 SPDYE16A6NNV3 312 aaPredicted RBP6.12□□□□□ -1.43
SCARNA15.2-201ENST00000516409 FAM117AQ9C073 453 aa6.12□□□□□ -1.43
SCARNA15.2-201ENST00000516409 DPY19L2Q6NUT2 758 aa6.11□□□□□ -1.43
SCARNA15.2-201ENST00000516409 ILDR1Q86SU0 546 aaPredicted RBP6.11□□□□□ -1.43
SCARNA15.2-201ENST00000516409 RSPH6AQ9H0K4 717 aa6.11□□□□□ -1.43
SCARNA15.2-201ENST00000516409 ZNF316A6NFI3 1004 aaPredicted RBP6.1□□□□□ -1.43
SCARNA15.2-201ENST00000516409 TTLL13PA6NNM8 815 aa6.1□□□□□ -1.43
SCARNA15.2-201ENST00000516409 GRXCR2A6NFK2 248 aa6.09□□□□□ -1.43
SCARNA15.2-201ENST00000516409 MICALL2Q8IY33 904 aa6.09□□□□□ -1.43
SCARNA15.2-201ENST00000516409 TMC2Q8TDI7 906 aa6.09□□□□□ -1.43
SCARNA15.2-201ENST00000516409 CCDC102AQ96A19 550 aa6.09□□□□□ -1.43
SCARNA15.2-201ENST00000516409 PLEKHG3A1L390 1219 aa6.08□□□□□ -1.44
SCARNA15.2-201ENST00000516409 NUTM2FA1L443 756 aa6.08□□□□□ -1.44
SCARNA15.2-201ENST00000516409 TIE1P35590 1138 aa6.08□□□□□ -1.44
SCARNA15.2-201ENST00000516409 ARID3AQ99856 593 aa6.08□□□□□ -1.44
SCARNA15.2-201ENST00000516409 BMP2KQ9NSY1 1161 aaPredicted RBP6.08□□□□□ -1.44
SCARNA15.2-201ENST00000516409 FOXK1P85037 733 aa6.07□□□□□ -1.44
SCARNA15.2-201ENST00000516409 MAP2K5Q13163 448 aa6.07□□□□□ -1.44
SCARNA15.2-201ENST00000516409 PLPP6Q8IY26 295 aa6.07□□□□□ -1.44
SCARNA15.2-201ENST00000516409 PODXL2Q9NZ53 605 aa6.07□□□□□ -1.44
SCARNA15.2-201ENST00000516409 TRIM35Q9UPQ4 493 aa6.07□□□□□ -1.44
SCARNA15.2-201ENST00000516409 MINK1Q8N4C8 1332 aaPredicted RBP6.06□□□□□ -1.44
SCARNA15.2-201ENST00000516409 PARP9Q8IXQ6 854 aa6.06□□□□□ -1.44
SCARNA15.2-201ENST00000516409 C2orf72A6NCS6 295 aa6.05□□□□□ -1.44
SCARNA15.2-201ENST00000516409 DDRGK1Q96HY6 314 aa6.05□□□□□ -1.44
SCARNA15.2-201ENST00000516409 C1orf115Q9H7X2 142 aa6.05□□□□□ -1.44
SCARNA15.2-201ENST00000516409 ARID3CA6NKF2 412 aa6.04□□□□□ -1.44
SCARNA15.2-201ENST00000516409 IRF6O14896 467 aa6.04□□□□□ -1.44
SCARNA15.2-201ENST00000516409 OSBPP22059 807 aa6.04□□□□□ -1.44
SCARNA15.2-201ENST00000516409 FECHP22830 423 aa6.04□□□□□ -1.44
SCARNA15.2-201ENST00000516409 MAP3K9P80192 1104 aa6.04□□□□□ -1.44
SCARNA15.2-201ENST00000516409 AMHR2Q16671 573 aa6.04□□□□□ -1.44
SCARNA15.2-201ENST00000516409 UPF1Q92900 1129 aaKnown RBP eCLIP6.04□□□□□ -1.44
SCARNA15.2-201ENST00000516409 GNPATO15228 680 aa6.03□□□□□ -1.44
SCARNA15.2-201ENST00000516409 PDCD7Q8N8D1 485 aaKnown RBP6.03□□□□□ -1.44
SCARNA15.2-201ENST00000516409 C19orf67A6NJJ6 358 aa6.02□□□□□ -1.45
SCARNA15.2-201ENST00000516409 KIF3CO14782 793 aa6.02□□□□□ -1.45
SCARNA15.2-201ENST00000516409 DDX12PQ92771 950 aa6.02□□□□□ -1.45
SCARNA15.2-201ENST00000516409 GALR2O43603 387 aaPredicted RBP6.01□□□□□ -1.45
SCARNA15.2-201ENST00000516409 FCHSD2O94868 740 aa6.01□□□□□ -1.45
SCARNA15.2-201ENST00000516409 PRIM1P49642 420 aaKnown RBP6.01□□□□□ -1.45
SCARNA15.2-201ENST00000516409 TTLL12Q14166 644 aaPredicted RBP6.01□□□□□ -1.45
SCARNA15.2-201ENST00000516409 HIC1Q14526 733 aa6.01□□□□□ -1.45
SCARNA15.2-201ENST00000516409 TRIM26Q12899 539 aaPredicted RBP6□□□□□ -1.45
SCARNA15.2-201ENST00000516409 BOLA1Q9Y3E2 137 aa6□□□□□ -1.45
SCARNA15.2-201ENST00000516409 APBB1O00213 710 aa5.99□□□□□ -1.45
SCARNA15.2-201ENST00000516409 TMEM121BQ9BXQ6 578 aaPredicted RBP5.99□□□□□ -1.45
SCARNA15.2-201ENST00000516409 G3V3G9 751 aa5.98□□□□□ -1.45
SCARNA15.2-201ENST00000516409 ONECUT3O60422 494 aaPredicted RBP5.98□□□□□ -1.45
SCARNA15.2-201ENST00000516409 MS4A1P11836 297 aa5.98□□□□□ -1.45
SCARNA15.2-201ENST00000516409 ATN1P54259 1190 aaPredicted RBP5.98□□□□□ -1.45
SCARNA15.2-201ENST00000516409 IRX5P78411 483 aaPredicted RBP5.98□□□□□ -1.45
SCARNA15.2-201ENST00000516409 FLIIQ13045 1269 aa5.98□□□□□ -1.45
SCARNA15.2-201ENST00000516409 GIGYF2Q6Y7W6 1299 aaKnown RBP5.98□□□□□ -1.45
SCARNA15.2-201ENST00000516409 PTGER2P43116 358 aa5.97□□□□□ -1.45
SCARNA15.2-201ENST00000516409 TMEM92Q6UXU6 159 aa5.97□□□□□ -1.45
SCARNA15.2-201ENST00000516409 OXER1Q8TDS5 423 aa5.97□□□□□ -1.45
SCARNA15.2-201ENST00000516409 REPIN1Q9BWE0 567 aaKnown RBP5.97□□□□□ -1.45
SCARNA15.2-201ENST00000516409 PTGDRQ13258 359 aa5.96□□□□□ -1.46
SCARNA15.2-201ENST00000516409 CLUAP1Q96AJ1 413 aa5.96□□□□□ -1.46
SCARNA15.2-201ENST00000516409 PCMTD1Q96MG8 357 aaPredicted RBP5.96□□□□□ -1.46
SCARNA15.2-201ENST00000516409 OCEL1Q9H607 264 aa5.96□□□□□ -1.46
SCARNA15.2-201ENST00000516409 EVI5O60447 810 aa5.95□□□□□ -1.46
SCARNA15.2-201ENST00000516409 HRCP23327 699 aa5.95□□□□□ -1.46
SCARNA15.2-201ENST00000516409 GOPCQ9HD26 462 aa5.95□□□□□ -1.46
SCARNA15.2-201ENST00000516409 CDHR5Q9HBB8 845 aa5.94□□□□□ -1.46
SCARNA15.2-201ENST00000516409 TBC1D12O60347 775 aa5.93□□□□□ -1.46
SCARNA15.2-201ENST00000516409 ATMINO43313 823 aaPredicted RBP5.92□□□□□ -1.46
SCARNA15.2-201ENST00000516409 TRAK2O60296 914 aa5.92□□□□□ -1.46
SCARNA15.2-201ENST00000516409 PLCG2P16885 1265 aa5.92□□□□□ -1.46
SCARNA15.2-201ENST00000516409 CCDC82Q8N4S0 544 aa5.92□□□□□ -1.46
SCARNA15.2-201ENST00000516409 A6NJR5 290 aa5.91□□□□□ -1.46
SCARNA15.2-201ENST00000516409 MDM2Q00987 491 aaPredicted RBP5.91□□□□□ -1.46
SCARNA15.2-201ENST00000516409 MCM6Q14566 821 aa5.91□□□□□ -1.46
SCARNA15.2-201ENST00000516409 SH3D19Q5HYK7 790 aa5.91□□□□□ -1.46
SCARNA15.2-201ENST00000516409 IER5LQ5T953 404 aa5.91□□□□□ -1.46
SCARNA15.2-201ENST00000516409 TMUB1Q9BVT8 246 aa5.91□□□□□ -1.46
SCARNA15.2-201ENST00000516409 CLCN1P35523 988 aa5.9□□□□□ -1.46
SCARNA15.2-201ENST00000516409 PHOX2BQ99453 314 aa5.9□□□□□ -1.46
SCARNA15.2-201ENST00000516409 NPDC1Q9NQX5 325 aaPredicted RBP5.9□□□□□ -1.46
SCARNA15.2-201ENST00000516409 EN1Q05925 392 aaPredicted RBP5.89□□□□□ -1.47
SCARNA15.2-201ENST00000516409 ASTLQ6HA08 431 aaPredicted RBP5.89□□□□□ -1.47
SCARNA15.2-201ENST00000516409 RBM33Q96EV2 1170 aaKnown RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms