RNA–Protein interactions for RNA: ENST00000516330.1

SCARNA18.1-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 83 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18.1-201ENST00000516330 ABCC1P33527 1531 aa9.71□□□□□ -0.86
SCARNA18.1-201ENST00000516330 ARHGAP5Q13017 1502 aa9.71□□□□□ -0.86
SCARNA18.1-201ENST00000516330 AEBP2Q6ZN18 517 aaPredicted RBP9.7□□□□□ -0.86
SCARNA18.1-201ENST00000516330 ZFYVE16Q7Z3T8 1539 aa9.7□□□□□ -0.86
SCARNA18.1-201ENST00000516330 CDC42BPAQ5VT25 1732 aa9.7□□□□□ -0.86
SCARNA18.1-201ENST00000516330 CDC42BPBQ9Y5S2 1711 aa9.7□□□□□ -0.86
SCARNA18.1-201ENST00000516330 HECW2Q9P2P5 1572 aa9.69□□□□□ -0.86
SCARNA18.1-201ENST00000516330 REREQ9P2R6 1566 aa9.69□□□□□ -0.86
SCARNA18.1-201ENST00000516330 BCORL1Q5H9F3 1711 aa9.68□□□□□ -0.86
SCARNA18.1-201ENST00000516330 EHMT2Q96KQ7 1210 aa9.67□□□□□ -0.86
SCARNA18.1-201ENST00000516330 ADAMTSL3P82987 1691 aa9.67□□□□□ -0.86
SCARNA18.1-201ENST00000516330 MAP3K1Q13233 1512 aa9.66□□□□□ -0.86
SCARNA18.1-201ENST00000516330 PLEKHH2Q8IVE3 1493 aa9.66□□□□□ -0.86
SCARNA18.1-201ENST00000516330 VPS8Q8N3P4 1428 aa9.66□□□□□ -0.86
SCARNA18.1-201ENST00000516330 TIAM1Q13009 1591 aa9.66□□□□□ -0.86
SCARNA18.1-201ENST00000516330 SUPT6HQ7KZ85 1726 aaKnown RBP9.65□□□□□ -0.86
SCARNA18.1-201ENST00000516330 SCAPERQ9BY12 1400 aa9.65□□□□□ -0.87
SCARNA18.1-201ENST00000516330 MTUS2Q5JR59 1369 aa9.64□□□□□ -0.87
SCARNA18.1-201ENST00000516330 EFCAB2Q5VUJ9 269 aa9.64□□□□□ -0.87
SCARNA18.1-201ENST00000516330 ATP1B4Q9UN42 357 aaPredicted RBP9.64□□□□□ -0.87
SCARNA18.1-201ENST00000516330 MLH3Q9UHC1 1453 aa9.64□□□□□ -0.87
SCARNA18.1-201ENST00000516330 C9orf84Q5VXU9 1444 aa9.64□□□□□ -0.87
SCARNA18.1-201ENST00000516330 SAMD9LQ8IVG5 1584 aa9.63□□□□□ -0.87
SCARNA18.1-201ENST00000516330 KDM4FA0A1W2PPD8 638 aa9.63□□□□□ -0.87
SCARNA18.1-201ENST00000516330 DIP2CQ9Y2E4 1556 aa9.63□□□□□ -0.87
SCARNA18.1-201ENST00000516330 GPATCH8Q9UKJ3 1502 aaKnown RBP9.62□□□□□ -0.87
SCARNA18.1-201ENST00000516330 MADDQ8WXG6 1647 aa9.62□□□□□ -0.87
SCARNA18.1-201ENST00000516330 KIAA1107Q9UPP5 1409 aa9.62□□□□□ -0.87
SCARNA18.1-201ENST00000516330 INO80Q9ULG1 1556 aaPredicted RBP9.62□□□□□ -0.87
SCARNA18.1-201ENST00000516330 SYCP2Q9BX26 1530 aa9.61□□□□□ -0.87
SCARNA18.1-201ENST00000516330 ABCA6Q8N139 1617 aa9.61□□□□□ -0.87
SCARNA18.1-201ENST00000516330 RAPGEF3O95398 923 aa9.61□□□□□ -0.87
SCARNA18.1-201ENST00000516330 AGLP35573 1532 aa9.61□□□□□ -0.87
SCARNA18.1-201ENST00000516330 YEATS2Q9ULM3 1422 aa9.6□□□□□ -0.87
SCARNA18.1-201ENST00000516330 ARHGEF12Q9NZN5 1544 aa9.6□□□□□ -0.87
SCARNA18.1-201ENST00000516330 FER1L4A9Z1Z3 1794 aa9.6□□□□□ -0.87
SCARNA18.1-201ENST00000516330 ATP10AO60312 1499 aa9.59□□□□□ -0.87
SCARNA18.1-201ENST00000516330 SIGLEC1Q9BZZ2 1709 aa9.59□□□□□ -0.87
SCARNA18.1-201ENST00000516330 KIDINS220Q9ULH0 1771 aa9.59□□□□□ -0.87
SCARNA18.1-201ENST00000516330 CCNB3Q8WWL7 1395 aa9.59□□□□□ -0.87
SCARNA18.1-201ENST00000516330 PLXNC1O60486 1568 aa9.58□□□□□ -0.88
SCARNA18.1-201ENST00000516330 ATP7AQ04656 1500 aa9.58□□□□□ -0.88
SCARNA18.1-201ENST00000516330 PTPRMP28827 1452 aa9.58□□□□□ -0.88
SCARNA18.1-201ENST00000516330 LRRC9Q6ZRR7 1453 aa9.58□□□□□ -0.88
SCARNA18.1-201ENST00000516330 RIMS1Q86UR5 1692 aaKnown RBP9.58□□□□□ -0.88
SCARNA18.1-201ENST00000516330 NCOA2Q15596 1464 aa9.57□□□□□ -0.88
SCARNA18.1-201ENST00000516330 ADGBQ8N7X0 1667 aa9.57□□□□□ -0.88
SCARNA18.1-201ENST00000516330 FAM135AQ9P2D6 1515 aa9.56□□□□□ -0.88
SCARNA18.1-201ENST00000516330 ARHGEF5Q12774 1597 aa9.56□□□□□ -0.88
SCARNA18.1-201ENST00000516330 TRAPPC8Q9Y2L5 1435 aa9.56□□□□□ -0.88
SCARNA18.1-201ENST00000516330 MROH2AA6NES4 1674 aa9.55□□□□□ -0.88
SCARNA18.1-201ENST00000516330 CAMSAP2Q08AD1 1489 aa9.54□□□□□ -0.88
SCARNA18.1-201ENST00000516330 CCDC141Q6ZP82 1450 aa9.54□□□□□ -0.88
SCARNA18.1-201ENST00000516330 RTEL1-TNFRSF6BF6WH68 1400 aa9.54□□□□□ -0.88
SCARNA18.1-201ENST00000516330 MIA2Q96PC5 1412 aa9.54□□□□□ -0.88
SCARNA18.1-201ENST00000516330 MAST1Q9Y2H9 1570 aa9.53□□□□□ -0.88
SCARNA18.1-201ENST00000516330 MBD5Q9P267 1494 aa9.53□□□□□ -0.88
SCARNA18.1-201ENST00000516330 CNTLNQ9NXG0 1405 aa9.52□□□□□ -0.89
SCARNA18.1-201ENST00000516330 CFDP1Q9UEE9 299 aaPredicted RBP9.52□□□□□ -0.89
SCARNA18.1-201ENST00000516330 PREX1Q8TCU6 1659 aa9.51□□□□□ -0.89
SCARNA18.1-201ENST00000516330 ARID4BQ4LE39 1312 aaPredicted RBP9.51□□□□□ -0.89
SCARNA18.1-201ENST00000516330 MYOM3Q5VTT5 1437 aa9.5□□□□□ -0.89
SCARNA18.1-201ENST00000516330 A2MP01023 1474 aa9.5□□□□□ -0.89
SCARNA18.1-201ENST00000516330 LMTK3Q96Q04 1460 aa9.5□□□□□ -0.89
SCARNA18.1-201ENST00000516330 CROCC2H7BZ55 1655 aa9.5□□□□□ -0.89
SCARNA18.1-201ENST00000516330 EIF2AK4Q9P2K8 1649 aaKnown RBP9.49□□□□□ -0.89
SCARNA18.1-201ENST00000516330 SHANK2Q9UPX8 1470 aa9.49□□□□□ -0.89
SCARNA18.1-201ENST00000516330 RSPH4AQ5TD94 716 aa9.49□□□□□ -0.89
SCARNA18.1-201ENST00000516330 AFAP1Q8N556 730 aa9.49□□□□□ -0.89
SCARNA18.1-201ENST00000516330 SPAG9O60271 1321 aaKnown RBP9.49□□□□□ -0.89
SCARNA18.1-201ENST00000516330 C3P01024 1663 aa9.48□□□□□ -0.89
SCARNA18.1-201ENST00000516330 ZC3H13Q5T200 1668 aaKnown RBP9.48□□□□□ -0.89
SCARNA18.1-201ENST00000516330 LOC105371045A0A1W2PR82 267 aa9.46□□□□□ -0.9
SCARNA18.1-201ENST00000516330 NPATQ14207 1427 aa9.46□□□□□ -0.9
SCARNA18.1-201ENST00000516330 TCOF1Q13428 1488 aaKnown RBP9.46□□□□□ -0.9
SCARNA18.1-201ENST00000516330 KDM5DQ9BY66 1539 aa9.46□□□□□ -0.9
SCARNA18.1-201ENST00000516330 DNMT1P26358 1616 aaKnown RBP9.45□□□□□ -0.9
SCARNA18.1-201ENST00000516330 RNF17Q9BXT8 1623 aaKnown RBP9.45□□□□□ -0.9
SCARNA18.1-201ENST00000516330 PTPN23Q9H3S7 1636 aa9.45□□□□□ -0.9
SCARNA18.1-201ENST00000516330 ZNF142P52746 1687 aaPredicted RBP9.45□□□□□ -0.9
SCARNA18.1-201ENST00000516330 ZNF777Q9ULD5 760 aaPredicted RBP9.45□□□□□ -0.9
SCARNA18.1-201ENST00000516330 APLP2Q06481 763 aa9.44□□□□□ -0.9
SCARNA18.1-201ENST00000516330 MYT1LQ9UL68 1186 aa9.44□□□□□ -0.9
SCARNA18.1-201ENST00000516330 UHRF1BP1Q6BDS2 1440 aa9.43□□□□□ -0.9
SCARNA18.1-201ENST00000516330 FGD6Q6ZV73 1430 aa9.43□□□□□ -0.9
SCARNA18.1-201ENST00000516330 CLTCQ00610 1675 aaKnown RBP9.42□□□□□ -0.9
SCARNA18.1-201ENST00000516330 HNRNPMP52272 730 aaKnown RBP eCLIP9.42□□□□□ -0.9
SCARNA18.1-201ENST00000516330 PPP6R1Q9UPN7 881 aa9.42□□□□□ -0.9
SCARNA18.1-201ENST00000516330 MYO3AQ8NEV4 1616 aa9.42□□□□□ -0.9
SCARNA18.1-201ENST00000516330 PRDM15P57071 1507 aaPredicted RBP9.41□□□□□ -0.9
SCARNA18.1-201ENST00000516330 DUOX2Q9NRD8 1548 aa9.41□□□□□ -0.9
SCARNA18.1-201ENST00000516330 ERBINQ96RT1 1412 aa9.41□□□□□ -0.9
SCARNA18.1-201ENST00000516330 SETD1BQ9UPS6 1966 aaKnown RBP9.41□□□□□ -0.9
SCARNA18.1-201ENST00000516330 DHX29Q7Z478 1369 aaKnown RBP9.41□□□□□ -0.9
SCARNA18.1-201ENST00000516330 ESF1Q9H501 851 aaKnown RBP9.4□□□□□ -0.9
SCARNA18.1-201ENST00000516330 DEPDC5O75140 1603 aa9.4□□□□□ -0.9
SCARNA18.1-201ENST00000516330 ZNF644Q9H582 1327 aaPredicted RBP9.39□□□□□ -0.91
SCARNA18.1-201ENST00000516330 MLECQ14165 292 aa9.39□□□□□ -0.91
SCARNA18.1-201ENST00000516330 KANK4Q5T7N3 995 aaPredicted RBP9.39□□□□□ -0.91
SCARNA18.1-201ENST00000516330 ADGRL2O95490 1459 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms