RNA–Protein interactions for RNA: ENST00000516278.1

RN7SKP248-201, Transcript of RNA, 7SK small nuclear pseudogene 248, humanhuman

BASIC

Gene RN7SKP248, Length 305 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP248-201ENST00000516278 PDE4AP27815 886 aa11.41□□□□□ -0.58
RN7SKP248-201ENST00000516278 HAP1P54257 671 aaPredicted RBP11.41□□□□□ -0.58
RN7SKP248-201ENST00000516278 SLAIN1Q8ND83 568 aa11.41□□□□□ -0.58
RN7SKP248-201ENST00000516278 TMC2Q8TDI7 906 aa11.4□□□□□ -0.58
RN7SKP248-201ENST00000516278 CADPS2Q86UW7 1296 aa11.39□□□□□ -0.59
RN7SKP248-201ENST00000516278 GPHNQ9NQX3 736 aaPredicted RBP11.39□□□□□ -0.59
RN7SKP248-201ENST00000516278 TMEM92Q6UXU6 159 aa11.38□□□□□ -0.59
RN7SKP248-201ENST00000516278 KIF3CO14782 793 aa11.37□□□□□ -0.59
RN7SKP248-201ENST00000516278 CRISPLD2Q9H0B8 497 aa11.37□□□□□ -0.59
RN7SKP248-201ENST00000516278 C2orf72A6NCS6 295 aa11.36□□□□□ -0.59
RN7SKP248-201ENST00000516278 NCKAP5LQ9HCH0 1330 aa11.35□□□□□ -0.59
RN7SKP248-201ENST00000516278 LARP6Q9BRS8 491 aaKnown RBP11.34□□□□□ -0.59
RN7SKP248-201ENST00000516278 FOXK1P85037 733 aa11.32□□□□□ -0.6
RN7SKP248-201ENST00000516278 MFSD10Q14728 455 aa11.3□□□□□ -0.6
RN7SKP248-201ENST00000516278 SNPHO15079 494 aa11.29□□□□□ -0.6
RN7SKP248-201ENST00000516278 DDX27Q96GQ7 796 aaKnown RBP11.29□□□□□ -0.6
RN7SKP248-201ENST00000516278 WDR70Q9NW82 654 aa11.29□□□□□ -0.6
RN7SKP248-201ENST00000516278 DSG2Q14126 1118 aa11.28□□□□□ -0.6
RN7SKP248-201ENST00000516278 VSIG10Q8N0Z9 540 aa11.28□□□□□ -0.6
RN7SKP248-201ENST00000516278 PPP1R15BQ5SWA1 713 aa11.26□□□□□ -0.61
RN7SKP248-201ENST00000516278 PLPP6Q8IY26 295 aa11.26□□□□□ -0.61
RN7SKP248-201ENST00000516278 DOK7Q18PE1 504 aa11.22□□□□□ -0.61
RN7SKP248-201ENST00000516278 SLC24A1O60721 1099 aa11.2□□□□□ -0.62
RN7SKP248-201ENST00000516278 SLC34A2O95436 690 aa11.2□□□□□ -0.62
RN7SKP248-201ENST00000516278 HOXB3P14651 431 aaPredicted RBP11.2□□□□□ -0.62
RN7SKP248-201ENST00000516278 KDM2AQ9Y2K7 1162 aa11.2□□□□□ -0.62
RN7SKP248-201ENST00000516278 RIMBP2O15034 1052 aa11.18□□□□□ -0.62
RN7SKP248-201ENST00000516278 E2F4Q16254 413 aa11.18□□□□□ -0.62
RN7SKP248-201ENST00000516278 CAMK2BQ13554 666 aa11.17□□□□□ -0.62
RN7SKP248-201ENST00000516278 ZSWIM6Q9HCJ5 1215 aa11.17□□□□□ -0.62
RN7SKP248-201ENST00000516278 ZNF710Q8N1W2 664 aa11.16□□□□□ -0.62
RN7SKP248-201ENST00000516278 PTCD2Q8WV60 388 aaKnown RBP11.15□□□□□ -0.62
RN7SKP248-201ENST00000516278 TBC1D12O60347 775 aa11.14□□□□□ -0.63
RN7SKP248-201ENST00000516278 FAM163AQ96GL9 167 aaPredicted RBP11.13□□□□□ -0.63
RN7SKP248-201ENST00000516278 OXER1Q8TDS5 423 aa11.11□□□□□ -0.63
RN7SKP248-201ENST00000516278 P3H3Q8IVL6 736 aa11.1□□□□□ -0.63
RN7SKP248-201ENST00000516278 EMILIN3Q9NT22 766 aa11.1□□□□□ -0.63
RN7SKP248-201ENST00000516278 PCDHGA4Q9Y5G9 962 aa11.1□□□□□ -0.63
RN7SKP248-201ENST00000516278 GPR153Q6NV75 609 aa11.09□□□□□ -0.63
RN7SKP248-201ENST00000516278 ST18O60284 1047 aa11.08□□□□□ -0.64
RN7SKP248-201ENST00000516278 MAP3K9P80192 1104 aa11.08□□□□□ -0.64
RN7SKP248-201ENST00000516278 UPF1Q92900 1129 aaKnown RBP eCLIP11.08□□□□□ -0.64
RN7SKP248-201ENST00000516278 ARIH1Q9Y4X5 557 aaPredicted RBP11.08□□□□□ -0.64
RN7SKP248-201ENST00000516278 HOXB1P14653 301 aaPredicted RBP11.07□□□□□ -0.64
RN7SKP248-201ENST00000516278 ARSIQ5FYB1 569 aa11.07□□□□□ -0.64
RN7SKP248-201ENST00000516278 ARHGEF1Q92888 912 aaKnown RBP11.06□□□□□ -0.64
RN7SKP248-201ENST00000516278 KCNV2Q8TDN2 545 aa11.05□□□□□ -0.64
RN7SKP248-201ENST00000516278 DPYSL4O14531 572 aa11.02□□□□□ -0.65
RN7SKP248-201ENST00000516278 KDM4FA0A1W2PPD8 638 aa11□□□□□ -0.65
RN7SKP248-201ENST00000516278 ZNF316A6NFI3 1004 aaPredicted RBP11□□□□□ -0.65
RN7SKP248-201ENST00000516278 SPDYE16A6NNV3 312 aaPredicted RBP11□□□□□ -0.65
RN7SKP248-201ENST00000516278 KHSRPQ92945 711 aaKnown RBP eCLIP11□□□□□ -0.65
RN7SKP248-201ENST00000516278 EVI5O60447 810 aa10.99□□□□□ -0.65
RN7SKP248-201ENST00000516278 NUDT7P0C024 238 aa10.99□□□□□ -0.65
RN7SKP248-201ENST00000516278 LCE2DQ5TA82 110 aaPredicted RBP10.99□□□□□ -0.65
RN7SKP248-201ENST00000516278 ANO8Q9HCE9 1232 aaPredicted RBP10.99□□□□□ -0.65
RN7SKP248-201ENST00000516278 EMP3P54852 163 aa10.96□□□□□ -0.65
RN7SKP248-201ENST00000516278 PDIA6Q15084 440 aa10.96□□□□□ -0.65
RN7SKP248-201ENST00000516278 MARVELD3Q96A59 401 aa10.95□□□□□ -0.66
RN7SKP248-201ENST00000516278 ERBB3P21860 1342 aa10.93□□□□□ -0.66
RN7SKP248-201ENST00000516278 PSDA5PKW4 1024 aaPredicted RBP10.93□□□□□ -0.66
RN7SKP248-201ENST00000516278 LHX6Q9UPM6 363 aa10.92□□□□□ -0.66
RN7SKP248-201ENST00000516278 PTGER2P43116 358 aa10.91□□□□□ -0.66
RN7SKP248-201ENST00000516278 FAM205CA6NFA0 338 aa10.89□□□□□ -0.67
RN7SKP248-201ENST00000516278 VARS2Q5ST30 1063 aaKnown RBP10.86□□□□□ -0.67
RN7SKP248-201ENST00000516278 JPH4Q96JJ6 628 aa10.86□□□□□ -0.67
RN7SKP248-201ENST00000516278 PHF14O94880 888 aa10.85□□□□□ -0.67
RN7SKP248-201ENST00000516278 FOSBP53539 338 aa10.85□□□□□ -0.67
RN7SKP248-201ENST00000516278 PPP4R3BQ5MIZ7 849 aa10.85□□□□□ -0.67
RN7SKP248-201ENST00000516278 POTEGQ6S5H5 508 aa10.85□□□□□ -0.67
RN7SKP248-201ENST00000516278 HS3ST6Q96QI5 342 aa10.85□□□□□ -0.67
RN7SKP248-201ENST00000516278 POTEMA6NI47 508 aa10.84□□□□□ -0.67
RN7SKP248-201ENST00000516278 SEMA3EO15041 775 aa10.84□□□□□ -0.67
RN7SKP248-201ENST00000516278 ZNF454Q8N9F8 522 aa10.84□□□□□ -0.67
RN7SKP248-201ENST00000516278 DDX12PQ92771 950 aa10.84□□□□□ -0.67
RN7SKP248-201ENST00000516278 EPAS1Q99814 870 aa10.84□□□□□ -0.67
RN7SKP248-201ENST00000516278 NBR1Q14596 966 aa10.83□□□□□ -0.68
RN7SKP248-201ENST00000516278 GRXCR2A6NFK2 248 aa10.82□□□□□ -0.68
RN7SKP248-201ENST00000516278 ZNF687Q8N1G0 1237 aa10.82□□□□□ -0.68
RN7SKP248-201ENST00000516278 PCDHGA10Q9Y5H3 936 aa10.82□□□□□ -0.68
RN7SKP248-201ENST00000516278 POTEB3A0JP26 581 aa10.81□□□□□ -0.68
RN7SKP248-201ENST00000516278 SMYD5Q6GMV2 418 aa10.81□□□□□ -0.68
RN7SKP248-201ENST00000516278 TYW1BQ6NUM6 668 aa10.81□□□□□ -0.68
RN7SKP248-201ENST00000516278 POTEBQ6S5H4 581 aa10.81□□□□□ -0.68
RN7SKP248-201ENST00000516278 FBXW7Q969H0 707 aa10.81□□□□□ -0.68
RN7SKP248-201ENST00000516278 ZDHHC16Q969W1 377 aa10.81□□□□□ -0.68
RN7SKP248-201ENST00000516278 TESPA1A2RU30 521 aaPredicted RBP10.8□□□□□ -0.68
RN7SKP248-201ENST00000516278 MLLT3P42568 568 aaPredicted RBP10.79□□□□□ -0.68
RN7SKP248-201ENST00000516278 OSBPP22059 807 aa10.76□□□□□ -0.69
RN7SKP248-201ENST00000516278 BCL2L12Q9HB09 334 aa10.76□□□□□ -0.69
RN7SKP248-201ENST00000516278 TULP1O00294 542 aaPredicted RBP10.75□□□□□ -0.69
RN7SKP248-201ENST00000516278 PBX2P40425 430 aa10.75□□□□□ -0.69
RN7SKP248-201ENST00000516278 BCANQ96GW7 911 aa10.75□□□□□ -0.69
RN7SKP248-201ENST00000516278 KCNH8Q96L42 1107 aa10.74□□□□□ -0.69
RN7SKP248-201ENST00000516278 ADAM33Q9BZ11 813 aa10.74□□□□□ -0.69
RN7SKP248-201ENST00000516278 ARHGAP33O14559 1287 aa10.73□□□□□ -0.69
RN7SKP248-201ENST00000516278 EN1Q05925 392 aaPredicted RBP10.73□□□□□ -0.69
RN7SKP248-201ENST00000516278 CDAN1Q8IWY9 1227 aa10.73□□□□□ -0.69
RN7SKP248-201ENST00000516278 PCDH10Q9P2E7 1040 aa10.73□□□□□ -0.69
RN7SKP248-201ENST00000516278 PTPREP23469 700 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms