RNA–Protein interactions for RNA: ENST00000515918.1

RNU6-488P-201, Transcript of RNA, U6 small nuclear 488, pseudogene, humanhuman

BASIC

Gene RNU6-488P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-488P-201ENST00000515918 PPP1R15BQ5SWA1 713 aa8.13□□□□□ -1.11
RNU6-488P-201ENST00000515918 GPHNQ9NQX3 736 aaPredicted RBP8.13□□□□□ -1.11
RNU6-488P-201ENST00000515918 EMILIN3Q9NT22 766 aa8.13□□□□□ -1.11
RNU6-488P-201ENST00000515918 ZRANB1Q9UGI0 708 aa8.13□□□□□ -1.11
RNU6-488P-201ENST00000515918 ILDR1Q86SU0 546 aaPredicted RBP8.12□□□□□ -1.11
RNU6-488P-201ENST00000515918 PIP4P2Q8N4L2 257 aa8.12□□□□□ -1.11
RNU6-488P-201ENST00000515918 DPYSL4O14531 572 aa8.11□□□□□ -1.11
RNU6-488P-201ENST00000515918 GPR37O15354 613 aa8.11□□□□□ -1.11
RNU6-488P-201ENST00000515918 GOLGA2Q08379 1002 aa8.11□□□□□ -1.11
RNU6-488P-201ENST00000515918 ZMYND15Q9H091 742 aa8.11□□□□□ -1.11
RNU6-488P-201ENST00000515918 MKRN3Q13064 507 aaKnown RBP8.09□□□□□ -1.11
RNU6-488P-201ENST00000515918 PDIA6Q15084 440 aa8.09□□□□□ -1.11
RNU6-488P-201ENST00000515918 CD44P16070 742 aaKnown RBP8.08□□□□□ -1.12
RNU6-488P-201ENST00000515918 UBTFP17480 764 aaKnown RBP8.08□□□□□ -1.12
RNU6-488P-201ENST00000515918 DSG2Q14126 1118 aa8.08□□□□□ -1.12
RNU6-488P-201ENST00000515918 SPDYE16A6NNV3 312 aaPredicted RBP8.07□□□□□ -1.12
RNU6-488P-201ENST00000515918 FAM117AQ9C073 453 aa8.07□□□□□ -1.12
RNU6-488P-201ENST00000515918 MS4A3Q96HJ5 214 aa8.06□□□□□ -1.12
RNU6-488P-201ENST00000515918 RSPH6AQ9H0K4 717 aa8.05□□□□□ -1.12
RNU6-488P-201ENST00000515918 PLEKHG3A1L390 1219 aa8.04□□□□□ -1.12
RNU6-488P-201ENST00000515918 CHRDL2Q6WN34 429 aa8.04□□□□□ -1.12
RNU6-488P-201ENST00000515918 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.04□□□□□ -1.12
RNU6-488P-201ENST00000515918 DPY19L2Q6NUT2 758 aa8.03□□□□□ -1.12
RNU6-488P-201ENST00000515918 TTLL13PA6NNM8 815 aa8.02□□□□□ -1.13
RNU6-488P-201ENST00000515918 FOXK1P85037 733 aa8.02□□□□□ -1.13
RNU6-488P-201ENST00000515918 MINK1Q8N4C8 1332 aaPredicted RBP8.02□□□□□ -1.13
RNU6-488P-201ENST00000515918 ZNF316A6NFI3 1004 aaPredicted RBP8.01□□□□□ -1.13
RNU6-488P-201ENST00000515918 TIE1P35590 1138 aa8□□□□□ -1.13
RNU6-488P-201ENST00000515918 MICALL2Q8IY33 904 aa8□□□□□ -1.13
RNU6-488P-201ENST00000515918 C1orf115Q9H7X2 142 aa8□□□□□ -1.13
RNU6-488P-201ENST00000515918 CCDC102AQ96A19 550 aa7.99□□□□□ -1.13
RNU6-488P-201ENST00000515918 BMP2KQ9NSY1 1161 aaPredicted RBP7.99□□□□□ -1.13
RNU6-488P-201ENST00000515918 IRF6O14896 467 aa7.98□□□□□ -1.13
RNU6-488P-201ENST00000515918 MAP2K5Q13163 448 aa7.98□□□□□ -1.13
RNU6-488P-201ENST00000515918 AMHR2Q16671 573 aa7.98□□□□□ -1.13
RNU6-488P-201ENST00000515918 PODXL2Q9NZ53 605 aa7.98□□□□□ -1.13
RNU6-488P-201ENST00000515918 GRXCR2A6NFK2 248 aa7.97□□□□□ -1.13
RNU6-488P-201ENST00000515918 PARP9Q8IXQ6 854 aa7.97□□□□□ -1.13
RNU6-488P-201ENST00000515918 PLPP6Q8IY26 295 aa7.97□□□□□ -1.13
RNU6-488P-201ENST00000515918 TMC2Q8TDI7 906 aa7.97□□□□□ -1.13
RNU6-488P-201ENST00000515918 NUTM2FA1L443 756 aa7.96□□□□□ -1.14
RNU6-488P-201ENST00000515918 OSBPP22059 807 aa7.96□□□□□ -1.14
RNU6-488P-201ENST00000515918 FECHP22830 423 aa7.96□□□□□ -1.14
RNU6-488P-201ENST00000515918 KIF3CO14782 793 aa7.95□□□□□ -1.14
RNU6-488P-201ENST00000515918 PDCD7Q8N8D1 485 aaKnown RBP7.95□□□□□ -1.14
RNU6-488P-201ENST00000515918 DDRGK1Q96HY6 314 aa7.95□□□□□ -1.14
RNU6-488P-201ENST00000515918 TRIM35Q9UPQ4 493 aa7.95□□□□□ -1.14
RNU6-488P-201ENST00000515918 C2orf72A6NCS6 295 aa7.94□□□□□ -1.14
RNU6-488P-201ENST00000515918 GNPATO15228 680 aa7.94□□□□□ -1.14
RNU6-488P-201ENST00000515918 TMEM121BQ9BXQ6 578 aaPredicted RBP7.94□□□□□ -1.14
RNU6-488P-201ENST00000515918 C19orf67A6NJJ6 358 aa7.93□□□□□ -1.14
RNU6-488P-201ENST00000515918 MAP3K9P80192 1104 aa7.93□□□□□ -1.14
RNU6-488P-201ENST00000515918 TRIM26Q12899 539 aaPredicted RBP7.93□□□□□ -1.14
RNU6-488P-201ENST00000515918 ARID3AQ99856 593 aa7.93□□□□□ -1.14
RNU6-488P-201ENST00000515918 ONECUT3O60422 494 aaPredicted RBP7.92□□□□□ -1.14
RNU6-488P-201ENST00000515918 PRIM1P49642 420 aaKnown RBP7.92□□□□□ -1.14
RNU6-488P-201ENST00000515918 ARID3CA6NKF2 412 aa7.91□□□□□ -1.14
RNU6-488P-201ENST00000515918 HRCP23327 699 aa7.91□□□□□ -1.14
RNU6-488P-201ENST00000515918 PTGER2P43116 358 aa7.91□□□□□ -1.14
RNU6-488P-201ENST00000515918 HIC1Q14526 733 aa7.91□□□□□ -1.14
RNU6-488P-201ENST00000515918 FCHSD2O94868 740 aa7.9□□□□□ -1.14
RNU6-488P-201ENST00000515918 GOPCQ9HD26 462 aa7.9□□□□□ -1.14
RNU6-488P-201ENST00000515918 FLIIQ13045 1269 aa7.89□□□□□ -1.15
RNU6-488P-201ENST00000515918 APBB1O00213 710 aa7.88□□□□□ -1.15
RNU6-488P-201ENST00000515918 GALR2O43603 387 aaPredicted RBP7.88□□□□□ -1.15
RNU6-488P-201ENST00000515918 IRX5P78411 483 aaPredicted RBP7.88□□□□□ -1.15
RNU6-488P-201ENST00000515918 OXER1Q8TDS5 423 aa7.88□□□□□ -1.15
RNU6-488P-201ENST00000515918 DDX12PQ92771 950 aa7.88□□□□□ -1.15
RNU6-488P-201ENST00000515918 UPF1Q92900 1129 aaKnown RBP eCLIP7.88□□□□□ -1.15
RNU6-488P-201ENST00000515918 REPIN1Q9BWE0 567 aaKnown RBP7.88□□□□□ -1.15
RNU6-488P-201ENST00000515918 BOLA1Q9Y3E2 137 aa7.88□□□□□ -1.15
RNU6-488P-201ENST00000515918 MS4A1P11836 297 aa7.87□□□□□ -1.15
RNU6-488P-201ENST00000515918 PTGDRQ13258 359 aa7.87□□□□□ -1.15
RNU6-488P-201ENST00000515918 TTLL12Q14166 644 aaPredicted RBP7.86□□□□□ -1.15
RNU6-488P-201ENST00000515918 TMEM92Q6UXU6 159 aa7.86□□□□□ -1.15
RNU6-488P-201ENST00000515918 GIGYF2Q6Y7W6 1299 aaKnown RBP7.85□□□□□ -1.15
RNU6-488P-201ENST00000515918 ATN1P54259 1190 aaPredicted RBP7.84□□□□□ -1.15
RNU6-488P-201ENST00000515918 CLUAP1Q96AJ1 413 aa7.84□□□□□ -1.15
RNU6-488P-201ENST00000515918 OCEL1Q9H607 264 aa7.84□□□□□ -1.15
RNU6-488P-201ENST00000515918 A6NJR5 290 aa7.83□□□□□ -1.16
RNU6-488P-201ENST00000515918 TMUB1Q9BVT8 246 aa7.83□□□□□ -1.16
RNU6-488P-201ENST00000515918 TRAK2O60296 914 aa7.81□□□□□ -1.16
RNU6-488P-201ENST00000515918 EVI5O60447 810 aa7.81□□□□□ -1.16
RNU6-488P-201ENST00000515918 PCMTD1Q96MG8 357 aaPredicted RBP7.81□□□□□ -1.16
RNU6-488P-201ENST00000515918 NPDC1Q9NQX5 325 aaPredicted RBP7.81□□□□□ -1.16
RNU6-488P-201ENST00000515918 ATMINO43313 823 aaPredicted RBP7.79□□□□□ -1.16
RNU6-488P-201ENST00000515918 TBC1D12O60347 775 aa7.79□□□□□ -1.16
RNU6-488P-201ENST00000515918 SH3D19Q5HYK7 790 aa7.79□□□□□ -1.16
RNU6-488P-201ENST00000515918 PHOX2BQ99453 314 aa7.79□□□□□ -1.16
RNU6-488P-201ENST00000515918 CDHR5Q9HBB8 845 aa7.79□□□□□ -1.16
RNU6-488P-201ENST00000515918 MCM6Q14566 821 aa7.78□□□□□ -1.16
RNU6-488P-201ENST00000515918 IER5LQ5T953 404 aa7.78□□□□□ -1.16
RNU6-488P-201ENST00000515918 CCDC82Q8N4S0 544 aa7.78□□□□□ -1.16
RNU6-488P-201ENST00000515918 G3V3G9 751 aa7.77□□□□□ -1.17
RNU6-488P-201ENST00000515918 ASTLQ6HA08 431 aaPredicted RBP7.77□□□□□ -1.17
RNU6-488P-201ENST00000515918 ANO8Q9HCE9 1232 aaPredicted RBP7.77□□□□□ -1.17
RNU6-488P-201ENST00000515918 CLCN1P35523 988 aa7.75□□□□□ -1.17
RNU6-488P-201ENST00000515918 MDM2Q00987 491 aaPredicted RBP7.75□□□□□ -1.17
RNU6-488P-201ENST00000515918 PROCA1Q8NCQ7 364 aaPredicted RBP7.75□□□□□ -1.17
RNU6-488P-201ENST00000515918 PTCD2Q8WV60 388 aaKnown RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms