RNA–Protein interactions for RNA: ENST00000515885.5

LINC00461-216, long intergenic non-protein coding RNA 461, humanhuman

TSL 5

Gene LINC00461, Length 719 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00461-216ENST00000515885 DDX27Q96GQ7 796 aaKnown RBP13.45□□□□□ -0.26
LINC00461-216ENST00000515885 AK7Q96M32 723 aa13.45□□□□□ -0.26
LINC00461-216ENST00000515885 RBM26Q5T8P6 1007 aaKnown RBP13.43□□□□□ -0.26
LINC00461-216ENST00000515885 KIF12Q96FN5 646 aa13.43□□□□□ -0.26
LINC00461-216ENST00000515885 NCAPD3P42695 1498 aa13.42□□□□□ -0.26
LINC00461-216ENST00000515885 MLLT3P42568 568 aaPredicted RBP13.41□□□□□ -0.26
LINC00461-216ENST00000515885 NESP48681 1621 aa13.41□□□□□ -0.26
LINC00461-216ENST00000515885 GPIHBP1Q8IV16 184 aa13.39□□□□□ -0.27
LINC00461-216ENST00000515885 PRKAR2AP13861 404 aaKnown RBP13.38□□□□□ -0.27
LINC00461-216ENST00000515885 IL27Q8NEV9 243 aa13.38□□□□□ -0.27
LINC00461-216ENST00000515885 KRI1Q8N9T8 703 aaKnown RBP13.36□□□□□ -0.27
LINC00461-216ENST00000515885 KDM4CQ9H3R0 1056 aa13.36□□□□□ -0.27
LINC00461-216ENST00000515885 THOC2Q8NI27 1593 aaKnown RBP13.35□□□□□ -0.27
LINC00461-216ENST00000515885 PAK3O75914 559 aaPredicted RBP13.34□□□□□ -0.27
LINC00461-216ENST00000515885 ZMYND15Q9H091 742 aa13.34□□□□□ -0.27
LINC00461-216ENST00000515885 ATAD2BQ9ULI0 1458 aa13.33□□□□□ -0.28
LINC00461-216ENST00000515885 UBTFP17480 764 aaKnown RBP13.32□□□□□ -0.28
LINC00461-216ENST00000515885 SMARCA2P51531 1590 aa13.32□□□□□ -0.28
LINC00461-216ENST00000515885 TRIM66O15016 1216 aa13.31□□□□□ -0.28
LINC00461-216ENST00000515885 HMGXB3Q12766 1538 aa13.3□□□□□ -0.28
LINC00461-216ENST00000515885 PDE4DQ08499 809 aa13.3□□□□□ -0.28
LINC00461-216ENST00000515885 KIF21AQ7Z4S6 1674 aa13.28□□□□□ -0.28
LINC00461-216ENST00000515885 RSPH6AQ9H0K4 717 aa13.27□□□□□ -0.29
LINC00461-216ENST00000515885 LAMC3Q9Y6N6 1575 aa13.25□□□□□ -0.29
LINC00461-216ENST00000515885 FXR2P51116 673 aaKnown RBP eCLIP13.25□□□□□ -0.29
LINC00461-216ENST00000515885 PPP1R15BQ5SWA1 713 aa13.25□□□□□ -0.29
LINC00461-216ENST00000515885 PODXL2Q9NZ53 605 aa13.25□□□□□ -0.29
LINC00461-216ENST00000515885 SMARCA4P51532 1647 aa13.24□□□□□ -0.29
LINC00461-216ENST00000515885 BAZ1BQ9UIG0 1483 aaKnown RBP13.23□□□□□ -0.29
LINC00461-216ENST00000515885 EMILIN3Q9NT22 766 aa13.22□□□□□ -0.29
LINC00461-216ENST00000515885 DPYSL4O14531 572 aa13.21□□□□□ -0.29
LINC00461-216ENST00000515885 GPR37O15354 613 aa13.21□□□□□ -0.29
LINC00461-216ENST00000515885 GOLGA2Q08379 1002 aa13.2□□□□□ -0.3
LINC00461-216ENST00000515885 GPHNQ9NQX3 736 aaPredicted RBP13.2□□□□□ -0.3
LINC00461-216ENST00000515885 PDS5BQ9NTI5 1447 aa13.2□□□□□ -0.3
LINC00461-216ENST00000515885 MKRN3Q13064 507 aaKnown RBP13.19□□□□□ -0.3
LINC00461-216ENST00000515885 TMEM106CQ9BVX2 250 aa13.19□□□□□ -0.3
LINC00461-216ENST00000515885 PDIA6Q15084 440 aa13.18□□□□□ -0.3
LINC00461-216ENST00000515885 FAM117AQ9C073 453 aa13.18□□□□□ -0.3
LINC00461-216ENST00000515885 PHF12Q96QT6 1004 aa13.17□□□□□ -0.3
LINC00461-216ENST00000515885 SPDYE16A6NNV3 312 aaPredicted RBP13.16□□□□□ -0.3
LINC00461-216ENST00000515885 ZRANB1Q9UGI0 708 aa13.16□□□□□ -0.3
LINC00461-216ENST00000515885 TRPC6Q9Y210 931 aa13.15□□□□□ -0.3
LINC00461-216ENST00000515885 BAZ1AQ9NRL2 1556 aaPredicted RBP13.15□□□□□ -0.3
LINC00461-216ENST00000515885 C1orf115Q9H7X2 142 aa13.14□□□□□ -0.31
LINC00461-216ENST00000515885 ZNF316A6NFI3 1004 aaPredicted RBP13.13□□□□□ -0.31
LINC00461-216ENST00000515885 PLEKHG3A1L390 1219 aa13.12□□□□□ -0.31
LINC00461-216ENST00000515885 ILDR1Q86SU0 546 aaPredicted RBP13.12□□□□□ -0.31
LINC00461-216ENST00000515885 DSG2Q14126 1118 aa13.11□□□□□ -0.31
LINC00461-216ENST00000515885 TRIM26Q12899 539 aaPredicted RBP13.1□□□□□ -0.31
LINC00461-216ENST00000515885 MRC2Q9UBG0 1479 aa13.1□□□□□ -0.31
LINC00461-216ENST00000515885 ARID3AQ99856 593 aa13.09□□□□□ -0.31
LINC00461-216ENST00000515885 MINK1Q8N4C8 1332 aaPredicted RBP13.08□□□□□ -0.32
LINC00461-216ENST00000515885 CCDC102AQ96A19 550 aa13.07□□□□□ -0.32
LINC00461-216ENST00000515885 CD44P16070 742 aaKnown RBP13.05□□□□□ -0.32
LINC00461-216ENST00000515885 MAP2K5Q13163 448 aa13.05□□□□□ -0.32
LINC00461-216ENST00000515885 PIP4P2Q8N4L2 257 aa13.05□□□□□ -0.32
LINC00461-216ENST00000515885 MS4A3Q96HJ5 214 aa13.05□□□□□ -0.32
LINC00461-216ENST00000515885 DDRGK1Q96HY6 314 aa13.05□□□□□ -0.32
LINC00461-216ENST00000515885 PEG3Q9GZU2 1588 aa13.05□□□□□ -0.32
LINC00461-216ENST00000515885 WDR62O43379 1518 aa13.04□□□□□ -0.32
LINC00461-216ENST00000515885 AMHR2Q16671 573 aa13.04□□□□□ -0.32
LINC00461-216ENST00000515885 PARP9Q8IXQ6 854 aa13.04□□□□□ -0.32
LINC00461-216ENST00000515885 FOXK1P85037 733 aa13.03□□□□□ -0.32
LINC00461-216ENST00000515885 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.03□□□□□ -0.32
LINC00461-216ENST00000515885 IRF6O14896 467 aa13.02□□□□□ -0.33
LINC00461-216ENST00000515885 HRCP23327 699 aa13.02□□□□□ -0.33
LINC00461-216ENST00000515885 CADPSQ9ULU8 1353 aa13.02□□□□□ -0.33
LINC00461-216ENST00000515885 ARID3CA6NKF2 412 aa13.01□□□□□ -0.33
LINC00461-216ENST00000515885 NUTM2FA1L443 756 aa13□□□□□ -0.33
LINC00461-216ENST00000515885 GRXCR2A6NFK2 248 aa13□□□□□ -0.33
LINC00461-216ENST00000515885 DPY19L2Q6NUT2 758 aa13□□□□□ -0.33
LINC00461-216ENST00000515885 RIMBP3CA6NJZ7 1639 aa12.98□□□□□ -0.33
LINC00461-216ENST00000515885 RIMBP3BA6NNM3 1639 aa12.98□□□□□ -0.33
LINC00461-216ENST00000515885 RIMBP3Q9UFD9 1639 aa12.98□□□□□ -0.33
LINC00461-216ENST00000515885 CEP164Q9UPV0 1460 aa12.97□□□□□ -0.33
LINC00461-216ENST00000515885 TTLL13PA6NNM8 815 aa12.97□□□□□ -0.33
LINC00461-216ENST00000515885 FECHP22830 423 aa12.97□□□□□ -0.33
LINC00461-216ENST00000515885 FLIIQ13045 1269 aa12.97□□□□□ -0.33
LINC00461-216ENST00000515885 MICALL2Q8IY33 904 aa12.97□□□□□ -0.33
LINC00461-216ENST00000515885 APBB1O00213 710 aa12.96□□□□□ -0.33
LINC00461-216ENST00000515885 GNPATO15228 680 aa12.96□□□□□ -0.33
LINC00461-216ENST00000515885 ONECUT3O60422 494 aaPredicted RBP12.96□□□□□ -0.33
LINC00461-216ENST00000515885 PLPP6Q8IY26 295 aa12.96□□□□□ -0.33
LINC00461-216ENST00000515885 TMC2Q8TDI7 906 aa12.96□□□□□ -0.33
LINC00461-216ENST00000515885 MROH2BQ7Z745 1585 aa12.95□□□□□ -0.34
LINC00461-216ENST00000515885 OSBPP22059 807 aa12.95□□□□□ -0.34
LINC00461-216ENST00000515885 TIE1P35590 1138 aa12.95□□□□□ -0.34
LINC00461-216ENST00000515885 CHRDL2Q6WN34 429 aa12.93□□□□□ -0.34
LINC00461-216ENST00000515885 GOPCQ9HD26 462 aa12.92□□□□□ -0.34
LINC00461-216ENST00000515885 HIC1Q14526 733 aa12.91□□□□□ -0.34
LINC00461-216ENST00000515885 MAP3K9P80192 1104 aa12.9□□□□□ -0.34
LINC00461-216ENST00000515885 BMP2KQ9NSY1 1161 aaPredicted RBP12.9□□□□□ -0.34
LINC00461-216ENST00000515885 FANCD2Q9BXW9 1451 aa12.9□□□□□ -0.34
LINC00461-216ENST00000515885 C2orf72A6NCS6 295 aa12.89□□□□□ -0.35
LINC00461-216ENST00000515885 KIF3CO14782 793 aa12.88□□□□□ -0.35
LINC00461-216ENST00000515885 FCHSD2O94868 740 aa12.88□□□□□ -0.35
LINC00461-216ENST00000515885 TTLL12Q14166 644 aaPredicted RBP12.87□□□□□ -0.35
LINC00461-216ENST00000515885 TRIM35Q9UPQ4 493 aa12.87□□□□□ -0.35
LINC00461-216ENST00000515885 MS4A1P11836 297 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms