RNA–Protein interactions for RNA: ENST00000515675.1

AFP-207, Transcript of alpha fetoprotein, humanhuman

TSL 1 (best)

Gene AFP, Length 317 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-207ENST00000515675 PLCB2Q00722 1185 aa10.02□□□□□ -0.81
AFP-207ENST00000515675 C2orf72A6NCS6 295 aa10□□□□□ -0.81
AFP-207ENST00000515675 KIF3CO14782 793 aa10□□□□□ -0.81
AFP-207ENST00000515675 TSHZ2Q9NRE2 1034 aa9.99□□□□□ -0.81
AFP-207ENST00000515675 NCKAP5LQ9HCH0 1330 aa9.98□□□□□ -0.81
AFP-207ENST00000515675 CRISPLD2Q9H0B8 497 aa9.96□□□□□ -0.82
AFP-207ENST00000515675 TMC2Q8TDI7 906 aa9.95□□□□□ -0.82
AFP-207ENST00000515675 GPHNQ9NQX3 736 aaPredicted RBP9.95□□□□□ -0.82
AFP-207ENST00000515675 PDE4AP27815 886 aa9.92□□□□□ -0.82
AFP-207ENST00000515675 DSG2Q14126 1118 aa9.92□□□□□ -0.82
AFP-207ENST00000515675 LARP6Q9BRS8 491 aaKnown RBP9.92□□□□□ -0.82
AFP-207ENST00000515675 HOXB3P14651 431 aaPredicted RBP9.9□□□□□ -0.82
AFP-207ENST00000515675 FOXK1P85037 733 aa9.9□□□□□ -0.82
AFP-207ENST00000515675 FAM163AQ96GL9 167 aaPredicted RBP9.89□□□□□ -0.83
AFP-207ENST00000515675 PLPP6Q8IY26 295 aa9.88□□□□□ -0.83
AFP-207ENST00000515675 HAP1P54257 671 aaPredicted RBP9.87□□□□□ -0.83
AFP-207ENST00000515675 MFSD10Q14728 455 aa9.86□□□□□ -0.83
AFP-207ENST00000515675 LCE2DQ5TA82 110 aaPredicted RBP9.86□□□□□ -0.83
AFP-207ENST00000515675 SNPHO15079 494 aa9.85□□□□□ -0.83
AFP-207ENST00000515675 PPP1R15BQ5SWA1 713 aa9.85□□□□□ -0.83
AFP-207ENST00000515675 DDX27Q96GQ7 796 aaKnown RBP9.85□□□□□ -0.83
AFP-207ENST00000515675 ST18O60284 1047 aa9.84□□□□□ -0.83
AFP-207ENST00000515675 DOK7Q18PE1 504 aa9.81□□□□□ -0.84
AFP-207ENST00000515675 SLC34A2O95436 690 aa9.79□□□□□ -0.84
AFP-207ENST00000515675 ZNF710Q8N1W2 664 aa9.79□□□□□ -0.84
AFP-207ENST00000515675 GPR153Q6NV75 609 aa9.78□□□□□ -0.84
AFP-207ENST00000515675 KHSRPQ92945 711 aaKnown RBP eCLIP9.78□□□□□ -0.842e-16■■□□□ 12.4
AFP-207ENST00000515675 KDM2AQ9Y2K7 1162 aa9.78□□□□□ -0.84
AFP-207ENST00000515675 ARSIQ5FYB1 569 aa9.77□□□□□ -0.85
AFP-207ENST00000515675 EMILIN3Q9NT22 766 aa9.77□□□□□ -0.85
AFP-207ENST00000515675 UPF1Q92900 1129 aaKnown RBP eCLIP9.76□□□□□ -0.85
AFP-207ENST00000515675 WDR70Q9NW82 654 aa9.76□□□□□ -0.85
AFP-207ENST00000515675 RIMBP2O15034 1052 aa9.75□□□□□ -0.85
AFP-207ENST00000515675 HOXB1P14653 301 aaPredicted RBP9.75□□□□□ -0.85
AFP-207ENST00000515675 CAMK2BQ13554 666 aa9.75□□□□□ -0.85
AFP-207ENST00000515675 OXER1Q8TDS5 423 aa9.75□□□□□ -0.85
AFP-207ENST00000515675 PTCD2Q8WV60 388 aaKnown RBP9.75□□□□□ -0.85
AFP-207ENST00000515675 MARVELD3Q96A59 401 aa9.75□□□□□ -0.85
AFP-207ENST00000515675 PCDHGA4Q9Y5G9 962 aa9.75□□□□□ -0.85
AFP-207ENST00000515675 ZSWIM6Q9HCJ5 1215 aa9.74□□□□□ -0.85
AFP-207ENST00000515675 E2F4Q16254 413 aa9.71□□□□□ -0.86
AFP-207ENST00000515675 KDM4FA0A1W2PPD8 638 aa9.7□□□□□ -0.86
AFP-207ENST00000515675 NUDT7P0C024 238 aa9.7□□□□□ -0.86
AFP-207ENST00000515675 VSIG10Q8N0Z9 540 aa9.7□□□□□ -0.86
AFP-207ENST00000515675 POTEB3A0JP26 581 aa9.67□□□□□ -0.86
AFP-207ENST00000515675 DPYSL4O14531 572 aa9.67□□□□□ -0.86
AFP-207ENST00000515675 TBC1D12O60347 775 aa9.67□□□□□ -0.86
AFP-207ENST00000515675 EMP3P54852 163 aa9.67□□□□□ -0.86
AFP-207ENST00000515675 MAP3K9P80192 1104 aa9.67□□□□□ -0.86
AFP-207ENST00000515675 POTEBQ6S5H4 581 aa9.67□□□□□ -0.86
AFP-207ENST00000515675 POTEMA6NI47 508 aa9.66□□□□□ -0.86
AFP-207ENST00000515675 POTEGQ6S5H5 508 aa9.66□□□□□ -0.86
AFP-207ENST00000515675 KCNV2Q8TDN2 545 aa9.65□□□□□ -0.86
AFP-207ENST00000515675 FAM205CA6NFA0 338 aa9.64□□□□□ -0.87
AFP-207ENST00000515675 LHX6Q9UPM6 363 aa9.64□□□□□ -0.87
AFP-207ENST00000515675 EVI5O60447 810 aa9.63□□□□□ -0.87
AFP-207ENST00000515675 ZNF316A6NFI3 1004 aaPredicted RBP9.62□□□□□ -0.87
AFP-207ENST00000515675 ANO8Q9HCE9 1232 aaPredicted RBP9.62□□□□□ -0.87
AFP-207ENST00000515675 ARIH1Q9Y4X5 557 aaPredicted RBP9.62□□□□□ -0.87
AFP-207ENST00000515675 ERBB3P21860 1342 aa9.61□□□□□ -0.87
AFP-207ENST00000515675 HS3ST6Q96QI5 342 aa9.61□□□□□ -0.87
AFP-207ENST00000515675 VARS2Q5ST30 1063 aaKnown RBP9.6□□□□□ -0.87
AFP-207ENST00000515675 ARHGEF1Q92888 912 aaKnown RBP9.58□□□□□ -0.88
AFP-207ENST00000515675 PDIA6Q15084 440 aa9.56□□□□□ -0.88
AFP-207ENST00000515675 SLC24A1O60721 1099 aa9.55□□□□□ -0.88
AFP-207ENST00000515675 P3H3Q8IVL6 736 aa9.54□□□□□ -0.88
AFP-207ENST00000515675 SPDYE16A6NNV3 312 aaPredicted RBP9.53□□□□□ -0.88
AFP-207ENST00000515675 PTGER2P43116 358 aa9.52□□□□□ -0.89
AFP-207ENST00000515675 FOSBP53539 338 aa9.52□□□□□ -0.89
AFP-207ENST00000515675 CDAN1Q8IWY9 1227 aa9.52□□□□□ -0.89
AFP-207ENST00000515675 ZNF454Q8N9F8 522 aa9.52□□□□□ -0.89
AFP-207ENST00000515675 DDX12PQ92771 950 aa9.52□□□□□ -0.89
AFP-207ENST00000515675 POTEEQ6S8J3 1075 aa9.51□□□□□ -0.89
AFP-207ENST00000515675 ZNF687Q8N1G0 1237 aa9.51□□□□□ -0.89
AFP-207ENST00000515675 PCDHGA10Q9Y5H3 936 aa9.51□□□□□ -0.89
AFP-207ENST00000515675 JPH4Q96JJ6 628 aa9.49□□□□□ -0.89
AFP-207ENST00000515675 PSDA5PKW4 1024 aaPredicted RBP9.48□□□□□ -0.89
AFP-207ENST00000515675 SEMA3EO15041 775 aa9.48□□□□□ -0.89
AFP-207ENST00000515675 PHF14O94880 888 aa9.48□□□□□ -0.89
AFP-207ENST00000515675 MLLT3P42568 568 aaPredicted RBP9.48□□□□□ -0.89
AFP-207ENST00000515675 PPP4R3BQ5MIZ7 849 aa9.48□□□□□ -0.89
AFP-207ENST00000515675 GRXCR2A6NFK2 248 aa9.47□□□□□ -0.89
AFP-207ENST00000515675 KRTAP3-3Q9BYR6 98 aa9.47□□□□□ -0.89
AFP-207ENST00000515675 KRTAP3-2Q9BYR7 98 aa9.47□□□□□ -0.89
AFP-207ENST00000515675 ADAM33Q9BZ11 813 aa9.47□□□□□ -0.89
AFP-207ENST00000515675 AXIN2Q9Y2T1 843 aa9.47□□□□□ -0.89
AFP-207ENST00000515675 ZDHHC16Q969W1 377 aa9.46□□□□□ -0.9
AFP-207ENST00000515675 PRIM1P49642 420 aaKnown RBP9.45□□□□□ -0.9
AFP-207ENST00000515675 TYW1BQ6NUM6 668 aa9.44□□□□□ -0.9
AFP-207ENST00000515675 OSBPP22059 807 aa9.43□□□□□ -0.9
AFP-207ENST00000515675 PSEN2P49810 448 aa9.43□□□□□ -0.9
AFP-207ENST00000515675 NBR1Q14596 966 aa9.43□□□□□ -0.9
AFP-207ENST00000515675 RBM33Q96EV2 1170 aaKnown RBP9.42□□□□□ -0.9
AFP-207ENST00000515675 EPAS1Q99814 870 aa9.42□□□□□ -0.9
AFP-207ENST00000515675 BCL2L12Q9HB09 334 aa9.42□□□□□ -0.9
AFP-207ENST00000515675 PCDH10Q9P2E7 1040 aa9.42□□□□□ -0.9
AFP-207ENST00000515675 ARHGAP33O14559 1287 aa9.41□□□□□ -0.9
AFP-207ENST00000515675 TESPA1A2RU30 521 aaPredicted RBP9.4□□□□□ -0.9
AFP-207ENST00000515675 DMRTA1Q5VZB9 504 aa9.4□□□□□ -0.9
AFP-207ENST00000515675 FBXW7Q969H0 707 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms