RNA–Protein interactions for RNA: ENST00000515531.1

SMARCA5-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-203ENST00000515531 TMEM121BQ9BXQ6 578 aaPredicted RBP12.36□□□□□ -0.43
SMARCA5-203ENST00000515531 TSHZ2Q9NRE2 1034 aa12.35□□□□□ -0.43
SMARCA5-203ENST00000515531 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.32□□□□□ -0.44
SMARCA5-203ENST00000515531 POTEJP0CG39 1038 aa12.29□□□□□ -0.44
SMARCA5-203ENST00000515531 PDE4AP27815 886 aa12.26□□□□□ -0.45
SMARCA5-203ENST00000515531 CADPS2Q86UW7 1296 aa12.26□□□□□ -0.45
SMARCA5-203ENST00000515531 TMC2Q8TDI7 906 aa12.26□□□□□ -0.45
SMARCA5-203ENST00000515531 SLC24A1O60721 1099 aa12.25□□□□□ -0.45
SMARCA5-203ENST00000515531 FAM163AQ96GL9 167 aaPredicted RBP12.25□□□□□ -0.45
SMARCA5-203ENST00000515531 VSIG10Q8N0Z9 540 aa12.21□□□□□ -0.45
SMARCA5-203ENST00000515531 SLAIN1Q8ND83 568 aa12.2□□□□□ -0.46
SMARCA5-203ENST00000515531 LARP6Q9BRS8 491 aaKnown RBP12.2□□□□□ -0.46
SMARCA5-203ENST00000515531 GPHNQ9NQX3 736 aaPredicted RBP12.2□□□□□ -0.46
SMARCA5-203ENST00000515531 WDR70Q9NW82 654 aa12.2□□□□□ -0.46
SMARCA5-203ENST00000515531 NCKAP5LQ9HCH0 1330 aa12.19□□□□□ -0.46
SMARCA5-203ENST00000515531 CRISPLD2Q9H0B8 497 aa12.19□□□□□ -0.46
SMARCA5-203ENST00000515531 C2orf72A6NCS6 295 aa12.18□□□□□ -0.46
SMARCA5-203ENST00000515531 TMEM92Q6UXU6 159 aa12.17□□□□□ -0.46
SMARCA5-203ENST00000515531 DDX27Q96GQ7 796 aaKnown RBP12.16□□□□□ -0.46
SMARCA5-203ENST00000515531 KIF3CO14782 793 aa12.15□□□□□ -0.46
SMARCA5-203ENST00000515531 FOXK1P85037 733 aa12.13□□□□□ -0.47
SMARCA5-203ENST00000515531 PPP1R15BQ5SWA1 713 aa12.12□□□□□ -0.47
SMARCA5-203ENST00000515531 KDM2AQ9Y2K7 1162 aa12.12□□□□□ -0.47
SMARCA5-203ENST00000515531 DSG2Q14126 1118 aa12.11□□□□□ -0.47
SMARCA5-203ENST00000515531 MFSD10Q14728 455 aa12.1□□□□□ -0.47
SMARCA5-203ENST00000515531 PLPP6Q8IY26 295 aa12.09□□□□□ -0.47
SMARCA5-203ENST00000515531 SNPHO15079 494 aa12.04□□□□□ -0.48
SMARCA5-203ENST00000515531 E2F4Q16254 413 aa12.04□□□□□ -0.48
SMARCA5-203ENST00000515531 LCE2DQ5TA82 110 aaPredicted RBP12.03□□□□□ -0.48
SMARCA5-203ENST00000515531 DOK7Q18PE1 504 aa12.01□□□□□ -0.49
SMARCA5-203ENST00000515531 RIMBP2O15034 1052 aa11.99□□□□□ -0.49
SMARCA5-203ENST00000515531 P3H3Q8IVL6 736 aa11.99□□□□□ -0.49
SMARCA5-203ENST00000515531 CAMK2BQ13554 666 aa11.97□□□□□ -0.49
SMARCA5-203ENST00000515531 ZNF710Q8N1W2 664 aa11.97□□□□□ -0.49
SMARCA5-203ENST00000515531 CDAN1Q8IWY9 1227 aa11.96□□□□□ -0.49
SMARCA5-203ENST00000515531 TBC1D12O60347 775 aa11.95□□□□□ -0.5
SMARCA5-203ENST00000515531 SLC34A2O95436 690 aa11.95□□□□□ -0.5
SMARCA5-203ENST00000515531 UPF1Q92900 1129 aaKnown RBP eCLIP11.94□□□□□ -0.5
SMARCA5-203ENST00000515531 HOXB3P14651 431 aaPredicted RBP11.93□□□□□ -0.5
SMARCA5-203ENST00000515531 MAP3K9P80192 1104 aa11.93□□□□□ -0.5
SMARCA5-203ENST00000515531 KCNV2Q8TDN2 545 aa11.92□□□□□ -0.5
SMARCA5-203ENST00000515531 EMILIN3Q9NT22 766 aa11.92□□□□□ -0.5
SMARCA5-203ENST00000515531 ST18O60284 1047 aa11.91□□□□□ -0.5
SMARCA5-203ENST00000515531 PTCD2Q8WV60 388 aaKnown RBP11.91□□□□□ -0.5
SMARCA5-203ENST00000515531 OXER1Q8TDS5 423 aa11.9□□□□□ -0.5
SMARCA5-203ENST00000515531 ZSWIM6Q9HCJ5 1215 aa11.9□□□□□ -0.5
SMARCA5-203ENST00000515531 ARHGEF1Q92888 912 aaKnown RBP11.89□□□□□ -0.51
SMARCA5-203ENST00000515531 PCDHGA4Q9Y5G9 962 aa11.89□□□□□ -0.51
SMARCA5-203ENST00000515531 DPYSL4O14531 572 aa11.88□□□□□ -0.51
SMARCA5-203ENST00000515531 ARSIQ5FYB1 569 aa11.87□□□□□ -0.51
SMARCA5-203ENST00000515531 ARIH1Q9Y4X5 557 aaPredicted RBP11.86□□□□□ -0.51
SMARCA5-203ENST00000515531 ZNF316A6NFI3 1004 aaPredicted RBP11.84□□□□□ -0.51
SMARCA5-203ENST00000515531 GPR153Q6NV75 609 aa11.83□□□□□ -0.52
SMARCA5-203ENST00000515531 EVI5O60447 810 aa11.81□□□□□ -0.52
SMARCA5-203ENST00000515531 HOXB1P14653 301 aaPredicted RBP11.81□□□□□ -0.52
SMARCA5-203ENST00000515531 KHSRPQ92945 711 aaKnown RBP eCLIP11.81□□□□□ -0.524e-7■■■■□ 22.3
SMARCA5-203ENST00000515531 SPDYE16A6NNV3 312 aaPredicted RBP11.8□□□□□ -0.52
SMARCA5-203ENST00000515531 NUDT7P0C024 238 aa11.8□□□□□ -0.52
SMARCA5-203ENST00000515531 NBR1Q14596 966 aa11.78□□□□□ -0.52
SMARCA5-203ENST00000515531 PDIA6Q15084 440 aa11.77□□□□□ -0.53
SMARCA5-203ENST00000515531 ANO8Q9HCE9 1232 aaPredicted RBP11.74□□□□□ -0.53
SMARCA5-203ENST00000515531 EMP3P54852 163 aa11.73□□□□□ -0.53
SMARCA5-203ENST00000515531 KDM4FA0A1W2PPD8 638 aa11.71□□□□□ -0.53
SMARCA5-203ENST00000515531 SEMA3EO15041 775 aa11.71□□□□□ -0.53
SMARCA5-203ENST00000515531 MARVELD3Q96A59 401 aa11.71□□□□□ -0.53
SMARCA5-203ENST00000515531 BCANQ96GW7 911 aa11.71□□□□□ -0.53
SMARCA5-203ENST00000515531 LHX6Q9UPM6 363 aa11.71□□□□□ -0.53
SMARCA5-203ENST00000515531 ERBB3P21860 1342 aa11.7□□□□□ -0.54
SMARCA5-203ENST00000515531 PTGER2P43116 358 aa11.69□□□□□ -0.54
SMARCA5-203ENST00000515531 DDX12PQ92771 950 aa11.69□□□□□ -0.54
SMARCA5-203ENST00000515531 PSDA5PKW4 1024 aaPredicted RBP11.68□□□□□ -0.54
SMARCA5-203ENST00000515531 GRXCR2A6NFK2 248 aa11.67□□□□□ -0.54
SMARCA5-203ENST00000515531 SMYD5Q6GMV2 418 aa11.67□□□□□ -0.54
SMARCA5-203ENST00000515531 TULP1O00294 542 aaPredicted RBP11.66□□□□□ -0.54
SMARCA5-203ENST00000515531 FAM205CA6NFA0 338 aa11.65□□□□□ -0.54
SMARCA5-203ENST00000515531 ZNF454Q8N9F8 522 aa11.65□□□□□ -0.54
SMARCA5-203ENST00000515531 JPH4Q96JJ6 628 aa11.65□□□□□ -0.54
SMARCA5-203ENST00000515531 TESPA1A2RU30 521 aaPredicted RBP11.64□□□□□ -0.55
SMARCA5-203ENST00000515531 PHF14O94880 888 aa11.64□□□□□ -0.55
SMARCA5-203ENST00000515531 MLLT3P42568 568 aaPredicted RBP11.64□□□□□ -0.55
SMARCA5-203ENST00000515531 MMRN1Q13201 1228 aa11.64□□□□□ -0.55
SMARCA5-203ENST00000515531 VARS2Q5ST30 1063 aaKnown RBP11.64□□□□□ -0.55
SMARCA5-203ENST00000515531 SPNS2Q8IVW8 549 aa11.64□□□□□ -0.55
SMARCA5-203ENST00000515531 PPP4R3BQ5MIZ7 849 aa11.63□□□□□ -0.55
SMARCA5-203ENST00000515531 FOSBP53539 338 aa11.62□□□□□ -0.55
SMARCA5-203ENST00000515531 EPAS1Q99814 870 aa11.62□□□□□ -0.55
SMARCA5-203ENST00000515531 PCDHGA10Q9Y5H3 936 aa11.61□□□□□ -0.55
SMARCA5-203ENST00000515531 TYW1BQ6NUM6 668 aa11.6□□□□□ -0.55
SMARCA5-203ENST00000515531 ZDHHC16Q969W1 377 aa11.6□□□□□ -0.55
SMARCA5-203ENST00000515531 FBXW7Q969H0 707 aa11.59□□□□□ -0.55
SMARCA5-203ENST00000515531 HS3ST6Q96QI5 342 aa11.59□□□□□ -0.55
SMARCA5-203ENST00000515531 OSBPP22059 807 aa11.56□□□□□ -0.56
SMARCA5-203ENST00000515531 RBM33Q96EV2 1170 aaKnown RBP11.56□□□□□ -0.56
SMARCA5-203ENST00000515531 MAP3K7O43318 606 aa11.54□□□□□ -0.56
SMARCA5-203ENST00000515531 EN1Q05925 392 aaPredicted RBP11.53□□□□□ -0.56
SMARCA5-203ENST00000515531 ZNF687Q8N1G0 1237 aa11.53□□□□□ -0.56
SMARCA5-203ENST00000515531 KCNH8Q96L42 1107 aa11.53□□□□□ -0.56
SMARCA5-203ENST00000515531 ADAM33Q9BZ11 813 aa11.52□□□□□ -0.57
SMARCA5-203ENST00000515531 POTEB3A0JP26 581 aa11.51□□□□□ -0.57
SMARCA5-203ENST00000515531 PTPREP23469 700 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms