RNA–Protein interactions for RNA: ENST00000515365.1

HERC6-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 638 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-208ENST00000515365 DPY19L2Q6NUT2 758 aa8.31□□□□□ -1.08
HERC6-208ENST00000515365 MICALL2Q8IY33 904 aa8.31□□□□□ -1.08
HERC6-208ENST00000515365 PDCD7Q8N8D1 485 aaKnown RBP8.31□□□□□ -1.08
HERC6-208ENST00000515365 DSG2Q14126 1118 aa8.3□□□□□ -1.08
HERC6-208ENST00000515365 NEUROD2Q15784 382 aa8.3□□□□□ -1.08
HERC6-208ENST00000515365 BARGINQ6ZT62 677 aa8.3□□□□□ -1.08
HERC6-208ENST00000515365 ERICH6Q7L0X2 663 aa8.3□□□□□ -1.08
HERC6-208ENST00000515365 EMILIN3Q9NT22 766 aa8.3□□□□□ -1.08
HERC6-208ENST00000515365 CLCN6P51797 869 aa8.29□□□□□ -1.08
HERC6-208ENST00000515365 RBM26Q5T8P6 1007 aaKnown RBP8.29□□□□□ -1.08
HERC6-208ENST00000515365 DPYSL4O14531 572 aa8.28□□□□□ -1.08
HERC6-208ENST00000515365 FOXK1P85037 733 aa8.28□□□□□ -1.08
HERC6-208ENST00000515365 SPDYE16A6NNV3 312 aaPredicted RBP8.27□□□□□ -1.09
HERC6-208ENST00000515365 PDIA6Q15084 440 aa8.27□□□□□ -1.09
HERC6-208ENST00000515365 TMC2Q8TDI7 906 aa8.27□□□□□ -1.09
HERC6-208ENST00000515365 ATN1P54259 1190 aaPredicted RBP8.26□□□□□ -1.09
HERC6-208ENST00000515365 IRX5P78411 483 aaPredicted RBP8.26□□□□□ -1.09
HERC6-208ENST00000515365 GPIHBP1Q8IV16 184 aa8.26□□□□□ -1.09
HERC6-208ENST00000515365 TMEM121BQ9BXQ6 578 aaPredicted RBP8.26□□□□□ -1.09
HERC6-208ENST00000515365 IER5LQ5T953 404 aa8.24□□□□□ -1.09
HERC6-208ENST00000515365 ASTLQ6HA08 431 aaPredicted RBP8.24□□□□□ -1.09
HERC6-208ENST00000515365 OCEL1Q9H607 264 aa8.24□□□□□ -1.09
HERC6-208ENST00000515365 KIF3CO14782 793 aa8.23□□□□□ -1.09
HERC6-208ENST00000515365 ATMINO43313 823 aaPredicted RBP8.23□□□□□ -1.09
HERC6-208ENST00000515365 EVX2Q03828 476 aa8.23□□□□□ -1.09
HERC6-208ENST00000515365 BOLA1Q9Y3E2 137 aa8.23□□□□□ -1.09
HERC6-208ENST00000515365 HAX1O00165 279 aa8.22□□□□□ -1.09
HERC6-208ENST00000515365 PLPP6Q8IY26 295 aa8.22□□□□□ -1.09
HERC6-208ENST00000515365 AK7Q96M32 723 aa8.22□□□□□ -1.09
HERC6-208ENST00000515365 C2orf72A6NCS6 295 aa8.21□□□□□ -1.1
HERC6-208ENST00000515365 GPR37O15354 613 aa8.18□□□□□ -1.1
HERC6-208ENST00000515365 C14orf37Q86TY3 774 aa8.18□□□□□ -1.1
HERC6-208ENST00000515365 KRI1Q8N9T8 703 aaKnown RBP8.18□□□□□ -1.1
HERC6-208ENST00000515365 G3V3G9 751 aa8.17□□□□□ -1.1
HERC6-208ENST00000515365 PLCG2P16885 1265 aa8.17□□□□□ -1.1
HERC6-208ENST00000515365 L3MBTL3Q96JM7 780 aaPredicted RBP8.16□□□□□ -1.1
HERC6-208ENST00000515365 TRIM66O15016 1216 aa8.15□□□□□ -1.1
HERC6-208ENST00000515365 MAP3K9P80192 1104 aa8.15□□□□□ -1.1
HERC6-208ENST00000515365 GPBP1L1Q9HC44 474 aaPredicted RBP8.15□□□□□ -1.1
HERC6-208ENST00000515365 TMEM92Q6UXU6 159 aa8.14□□□□□ -1.11
HERC6-208ENST00000515365 GRXCR2A6NFK2 248 aa8.13□□□□□ -1.11
HERC6-208ENST00000515365 OXER1Q8TDS5 423 aa8.13□□□□□ -1.11
HERC6-208ENST00000515365 KDM4CQ9H3R0 1056 aa8.13□□□□□ -1.11
HERC6-208ENST00000515365 PDE4DQ08499 809 aa8.12□□□□□ -1.11
HERC6-208ENST00000515365 DAXXQ9UER7 740 aaPredicted RBP8.12□□□□□ -1.11
HERC6-208ENST00000515365 OSBPP22059 807 aa8.11□□□□□ -1.11
HERC6-208ENST00000515365 PTGER2P43116 358 aa8.11□□□□□ -1.11
HERC6-208ENST00000515365 UPF1Q92900 1129 aaKnown RBP eCLIP8.11□□□□□ -1.11
HERC6-208ENST00000515365 NUTM2FA1L443 756 aa8.1□□□□□ -1.11
HERC6-208ENST00000515365 COLQQ9Y215 455 aaPredicted RBP8.1□□□□□ -1.11
HERC6-208ENST00000515365 MINK1Q8N4C8 1332 aaPredicted RBP8.09□□□□□ -1.11
HERC6-208ENST00000515365 GABBR2O75899 941 aa8.09□□□□□ -1.11
HERC6-208ENST00000515365 PELP1Q8IZL8 1130 aaKnown RBP8.09□□□□□ -1.11
HERC6-208ENST00000515365 SEC24BO95487 1268 aa8.08□□□□□ -1.12
HERC6-208ENST00000515365 MAP2K5Q13163 448 aa8.08□□□□□ -1.12
HERC6-208ENST00000515365 IL27Q8NEV9 243 aa8.08□□□□□ -1.12
HERC6-208ENST00000515365 GNPATO15228 680 aa8.06□□□□□ -1.12
HERC6-208ENST00000515365 TBC1D12O60347 775 aa8.06□□□□□ -1.12
HERC6-208ENST00000515365 DDX12PQ92771 950 aa8.06□□□□□ -1.12
HERC6-208ENST00000515365 CCDC102AQ96A19 550 aa8.06□□□□□ -1.12
HERC6-208ENST00000515365 IRF6O14896 467 aa8.05□□□□□ -1.12
HERC6-208ENST00000515365 EVI5O60447 810 aa8.05□□□□□ -1.12
HERC6-208ENST00000515365 FCHSD2O94868 740 aa8.05□□□□□ -1.12
HERC6-208ENST00000515365 PRIM1P49642 420 aaKnown RBP8.05□□□□□ -1.12
HERC6-208ENST00000515365 HIC1Q14526 733 aa8.05□□□□□ -1.12
HERC6-208ENST00000515365 SLC39A7Q92504 469 aa8.05□□□□□ -1.12
HERC6-208ENST00000515365 POTEFA5A3E0 1075 aa8.04□□□□□ -1.12
HERC6-208ENST00000515365 AMHR2Q16671 573 aa8.04□□□□□ -1.12
HERC6-208ENST00000515365 PTCD2Q8WV60 388 aaKnown RBP8.04□□□□□ -1.12
HERC6-208ENST00000515365 DCBLD2Q96PD2 775 aa8.04□□□□□ -1.12
HERC6-208ENST00000515365 ARXQ96QS3 562 aa8.03□□□□□ -1.12
HERC6-208ENST00000515365 C7P10643 843 aa8.02□□□□□ -1.13
HERC6-208ENST00000515365 FECHP22830 423 aa8.02□□□□□ -1.13
HERC6-208ENST00000515365 FAM117AQ9C073 453 aa8.02□□□□□ -1.13
HERC6-208ENST00000515365 ZNF316A6NFI3 1004 aaPredicted RBP8.01□□□□□ -1.13
HERC6-208ENST00000515365 SLC34A2O95436 690 aa8.01□□□□□ -1.13
HERC6-208ENST00000515365 PTGDRQ13258 359 aa8.01□□□□□ -1.13
HERC6-208ENST00000515365 ANO8Q9HCE9 1232 aaPredicted RBP8.01□□□□□ -1.13
HERC6-208ENST00000515365 C3orf67Q6ZVT6 689 aa8□□□□□ -1.13
HERC6-208ENST00000515365 PARP9Q8IXQ6 854 aa8□□□□□ -1.13
HERC6-208ENST00000515365 METRNQ9UJH8 293 aa7.99□□□□□ -1.13
HERC6-208ENST00000515365 PLEKHG3A1L390 1219 aa7.98□□□□□ -1.13
HERC6-208ENST00000515365 DDRGK1Q96HY6 314 aa7.98□□□□□ -1.13
HERC6-208ENST00000515365 PHF14O94880 888 aa7.96□□□□□ -1.14
HERC6-208ENST00000515365 EN1Q05925 392 aaPredicted RBP7.96□□□□□ -1.14
HERC6-208ENST00000515365 EPAS1Q99814 870 aa7.95□□□□□ -1.14
HERC6-208ENST00000515365 CDHR5Q9HBB8 845 aa7.95□□□□□ -1.14
HERC6-208ENST00000515365 NPDC1Q9NQX5 325 aaPredicted RBP7.95□□□□□ -1.14
HERC6-208ENST00000515365 SUPT5HO00267 1087 aaKnown RBP7.94□□□□□ -1.14
HERC6-208ENST00000515365 POTEIP0CG38 1075 aa7.94□□□□□ -1.14
HERC6-208ENST00000515365 TTLL12Q14166 644 aaPredicted RBP7.94□□□□□ -1.14
HERC6-208ENST00000515365 PCDHGA4Q9Y5G9 962 aa7.92□□□□□ -1.14
HERC6-208ENST00000515365 PCDHGA10Q9Y5H3 936 aa7.92□□□□□ -1.14
HERC6-208ENST00000515365 MAP3K7O43318 606 aa7.91□□□□□ -1.14
HERC6-208ENST00000515365 GIGYF2Q6Y7W6 1299 aaKnown RBP7.91□□□□□ -1.14
HERC6-208ENST00000515365 GOPCQ9HD26 462 aa7.91□□□□□ -1.14
HERC6-208ENST00000515365 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.91□□□□□ -1.14
HERC6-208ENST00000515365 KDM4FA0A1W2PPD8 638 aa7.9□□□□□ -1.14
HERC6-208ENST00000515365 MS4A1P11836 297 aa7.9□□□□□ -1.14
HERC6-208ENST00000515365 TYW1BQ6NUM6 668 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms