RNA–Protein interactions for RNA: ENST00000514934.1

SGCA-211, Transcript of sarcoglycan alpha, humanhuman

TSL 4

Gene SGCA, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-211ENST00000514934 PREX2Q70Z35 1606 aa23.99■■□□□ 1.43
SGCA-211ENST00000514934 BCORL1Q5H9F3 1711 aa23.98■■□□□ 1.43
SGCA-211ENST00000514934 POGZQ7Z3K3 1410 aa23.94■■□□□ 1.42
SGCA-211ENST00000514934 ATP1B4Q9UN42 357 aaPredicted RBP23.94■■□□□ 1.42
SGCA-211ENST00000514934 KDM5CP41229 1560 aa23.91■■□□□ 1.42
SGCA-211ENST00000514934 CDK11AQ9UQ88 783 aaPredicted RBP23.9■■□□□ 1.42
SGCA-211ENST00000514934 YEATS2Q9ULM3 1422 aa23.9■■□□□ 1.42
SGCA-211ENST00000514934 ZFYVE16Q7Z3T8 1539 aa23.89■■□□□ 1.42
SGCA-211ENST00000514934 SCAPERQ9BY12 1400 aa23.89■■□□□ 1.41
SGCA-211ENST00000514934 MADDQ8WXG6 1647 aa23.88■■□□□ 1.41
SGCA-211ENST00000514934 MAGI2Q86UL8 1455 aa23.88■■□□□ 1.41
SGCA-211ENST00000514934 ITSN2Q9NZM3 1697 aa23.88■■□□□ 1.41
SGCA-211ENST00000514934 ARHGAP5Q13017 1502 aa23.88■■□□□ 1.41
SGCA-211ENST00000514934 CEP162Q5TB80 1403 aa23.87■■□□□ 1.41
SGCA-211ENST00000514934 ABCC1P33527 1531 aa23.86■■□□□ 1.41
SGCA-211ENST00000514934 ARHGEF12Q9NZN5 1544 aa23.84■■□□□ 1.41
SGCA-211ENST00000514934 HECW2Q9P2P5 1572 aa23.83■■□□□ 1.41
SGCA-211ENST00000514934 EFCAB2Q5VUJ9 269 aa23.81■■□□□ 1.4
SGCA-211ENST00000514934 SAMD9LQ8IVG5 1584 aa23.8■■□□□ 1.4
SGCA-211ENST00000514934 PTPRMP28827 1452 aa23.8■■□□□ 1.4
SGCA-211ENST00000514934 ZNF518AQ6AHZ1 1483 aa23.8■■□□□ 1.4
SGCA-211ENST00000514934 RIMS1Q86UR5 1692 aaKnown RBP23.79■■□□□ 1.4
SGCA-211ENST00000514934 ABCA6Q8N139 1617 aa23.78■■□□□ 1.4
SGCA-211ENST00000514934 GPATCH8Q9UKJ3 1502 aaKnown RBP23.78■■□□□ 1.4
SGCA-211ENST00000514934 DIP2CQ9Y2E4 1556 aa23.78■■□□□ 1.4
SGCA-211ENST00000514934 KIDINS220Q9ULH0 1771 aa23.77■■□□□ 1.4
SGCA-211ENST00000514934 REREQ9P2R6 1566 aa23.75■■□□□ 1.39
SGCA-211ENST00000514934 FER1L4A9Z1Z3 1794 aa23.75■■□□□ 1.39
SGCA-211ENST00000514934 TRAPPC8Q9Y2L5 1435 aa23.75■■□□□ 1.39
SGCA-211ENST00000514934 ATP10AO60312 1499 aa23.73■■□□□ 1.39
SGCA-211ENST00000514934 TIAM1Q13009 1591 aa23.73■■□□□ 1.39
SGCA-211ENST00000514934 MLH3Q9UHC1 1453 aa23.72■■□□□ 1.39
SGCA-211ENST00000514934 EHBP1L1Q8N3D4 1523 aa23.72■■□□□ 1.39
SGCA-211ENST00000514934 C9orf84Q5VXU9 1444 aa23.7■■□□□ 1.38
SGCA-211ENST00000514934 AFAP1Q8N556 730 aa23.7■■□□□ 1.38
SGCA-211ENST00000514934 LOC105371045A0A1W2PR82 267 aa23.69■■□□□ 1.38
SGCA-211ENST00000514934 SYCP2Q9BX26 1530 aa23.69■■□□□ 1.38
SGCA-211ENST00000514934 INO80Q9ULG1 1556 aaPredicted RBP23.64■■□□□ 1.37
SGCA-211ENST00000514934 ARID4BQ4LE39 1312 aaPredicted RBP23.62■■□□□ 1.37
SGCA-211ENST00000514934 VPS8Q8N3P4 1428 aa23.62■■□□□ 1.37
SGCA-211ENST00000514934 AGLP35573 1532 aa23.62■■□□□ 1.37
SGCA-211ENST00000514934 MTUS2Q5JR59 1369 aa23.62■■□□□ 1.37
SGCA-211ENST00000514934 SUPT6HQ7KZ85 1726 aaKnown RBP23.62■■□□□ 1.37
SGCA-211ENST00000514934 KIAA1107Q9UPP5 1409 aa23.61■■□□□ 1.37
SGCA-211ENST00000514934 LMTK3Q96Q04 1460 aa23.6■■□□□ 1.37
SGCA-211ENST00000514934 PLXNC1O60486 1568 aa23.57■■□□□ 1.36
SGCA-211ENST00000514934 CCNB3Q8WWL7 1395 aa23.56■■□□□ 1.36
SGCA-211ENST00000514934 NCOA2Q15596 1464 aa23.56■■□□□ 1.36
SGCA-211ENST00000514934 PLEKHH2Q8IVE3 1493 aa23.56■■□□□ 1.36
SGCA-211ENST00000514934 MBD5Q9P267 1494 aa23.56■■□□□ 1.36
SGCA-211ENST00000514934 ATP7AQ04656 1500 aa23.55■■□□□ 1.36
SGCA-211ENST00000514934 MAP3K1Q13233 1512 aa23.54■■□□□ 1.36
SGCA-211ENST00000514934 C3P01024 1663 aa23.53■■□□□ 1.36
SGCA-211ENST00000514934 LRRC9Q6ZRR7 1453 aa23.51■■□□□ 1.35
SGCA-211ENST00000514934 ADGBQ8N7X0 1667 aa23.51■■□□□ 1.35
SGCA-211ENST00000514934 CFDP1Q9UEE9 299 aaPredicted RBP23.5■■□□□ 1.35
SGCA-211ENST00000514934 ZNF644Q9H582 1327 aaPredicted RBP23.5■■□□□ 1.35
SGCA-211ENST00000514934 PREX1Q8TCU6 1659 aa23.49■■□□□ 1.35
SGCA-211ENST00000514934 HNRNPMP52272 730 aaKnown RBP eCLIP23.49■■□□□ 1.35
SGCA-211ENST00000514934 MLECQ14165 292 aa23.49■■□□□ 1.35
SGCA-211ENST00000514934 SETD1BQ9UPS6 1966 aaKnown RBP23.49■■□□□ 1.35
SGCA-211ENST00000514934 ZNF777Q9ULD5 760 aaPredicted RBP23.48■■□□□ 1.35
SGCA-211ENST00000514934 MROH2AA6NES4 1674 aa23.45■■□□□ 1.34
SGCA-211ENST00000514934 CAMSAP2Q08AD1 1489 aa23.45■■□□□ 1.34
SGCA-211ENST00000514934 ARHGEF5Q12774 1597 aa23.43■■□□□ 1.34
SGCA-211ENST00000514934 SPAG9O60271 1321 aaKnown RBP23.42■■□□□ 1.34
SGCA-211ENST00000514934 KANK4Q5T7N3 995 aaPredicted RBP23.4■■□□□ 1.34
SGCA-211ENST00000514934 A2MP01023 1474 aa23.4■■□□□ 1.34
SGCA-211ENST00000514934 RTEL1-TNFRSF6BF6WH68 1400 aa23.38■■□□□ 1.33
SGCA-211ENST00000514934 CLTCQ00610 1675 aaKnown RBP23.38■■□□□ 1.33
SGCA-211ENST00000514934 CCDC141Q6ZP82 1450 aa23.37■■□□□ 1.33
SGCA-211ENST00000514934 CEBPAP49715 358 aaPredicted RBP23.36■■□□□ 1.33
SGCA-211ENST00000514934 STRCQ7RTU9 1775 aa23.36■■□□□ 1.33
SGCA-211ENST00000514934 MYT1LQ9UL68 1186 aa23.35■■□□□ 1.33
SGCA-211ENST00000514934 MAST1Q9Y2H9 1570 aa23.33■■□□□ 1.33
SGCA-211ENST00000514934 CNTLNQ9NXG0 1405 aa23.32■■□□□ 1.32
SGCA-211ENST00000514934 HSPA2P54652 639 aa23.3■■□□□ 1.32
SGCA-211ENST00000514934 MYOM3Q5VTT5 1437 aa23.3■■□□□ 1.32
SGCA-211ENST00000514934 CROCC2H7BZ55 1655 aa23.29■■□□□ 1.32
SGCA-211ENST00000514934 PLPPR3Q6T4P5 718 aa23.29■■□□□ 1.32
SGCA-211ENST00000514934 FBXO41Q8TF61 875 aa23.29■■□□□ 1.32
SGCA-211ENST00000514934 MIA2Q96PC5 1412 aa23.27■■□□□ 1.32
SGCA-211ENST00000514934 DHX29Q7Z478 1369 aaKnown RBP23.26■■□□□ 1.31
SGCA-211ENST00000514934 ZNF142P52746 1687 aaPredicted RBP23.25■■□□□ 1.31
SGCA-211ENST00000514934 RNF17Q9BXT8 1623 aaKnown RBP23.23■■□□□ 1.31
SGCA-211ENST00000514934 NPATQ14207 1427 aa23.23■■□□□ 1.31
SGCA-211ENST00000514934 PTPN23Q9H3S7 1636 aa23.22■■□□□ 1.31
SGCA-211ENST00000514934 UHRF1BP1Q6BDS2 1440 aa23.22■■□□□ 1.31
SGCA-211ENST00000514934 MYO3AQ8NEV4 1616 aa23.22■■□□□ 1.31
SGCA-211ENST00000514934 RSPH4AQ5TD94 716 aa23.21■■□□□ 1.31
SGCA-211ENST00000514934 ZMYM3Q14202 1370 aa23.21■■□□□ 1.31
SGCA-211ENST00000514934 MROH1Q8NDA8 1641 aa23.2■■□□□ 1.3
SGCA-211ENST00000514934 FAM135AQ9P2D6 1515 aa23.2■■□□□ 1.3
SGCA-211ENST00000514934 EIF2AK4Q9P2K8 1649 aaKnown RBP23.19■■□□□ 1.3
SGCA-211ENST00000514934 PTPRKQ15262 1439 aa23.19■■□□□ 1.3
SGCA-211ENST00000514934 TCOF1Q13428 1488 aaKnown RBP23.17■■□□□ 1.3
SGCA-211ENST00000514934 DNMT1P26358 1616 aaKnown RBP23.17■■□□□ 1.3
SGCA-211ENST00000514934 KDM5DQ9BY66 1539 aa23.15■■□□□ 1.3
SGCA-211ENST00000514934 SHANK2Q9UPX8 1470 aa23.14■■□□□ 1.29
SGCA-211ENST00000514934 FGD6Q6ZV73 1430 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms