RNA–Protein interactions for RNA: ENST00000514693.5

PROM1-217, Transcript of prominin 1, humanhuman

TSL 4

Gene PROM1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-217ENST00000514693 TPRNQ4KMQ1 711 aa10.22□□□□□ -0.77
PROM1-217ENST00000514693 ZNF710Q8N1W2 664 aa10.22□□□□□ -0.77
PROM1-217ENST00000514693 EMP3P54852 163 aa10.21□□□□□ -0.77
PROM1-217ENST00000514693 FBXO22Q8NEZ5 403 aa10.21□□□□□ -0.77
PROM1-217ENST00000514693 MFRPQ9BY79 579 aa10.21□□□□□ -0.77
PROM1-217ENST00000514693 KDM2AQ9Y2K7 1162 aa10.21□□□□□ -0.77
PROM1-217ENST00000514693 DOK7Q18PE1 504 aa10.2□□□□□ -0.78
PROM1-217ENST00000514693 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.19□□□□□ -0.78
PROM1-217ENST00000514693 RIMBP2O15034 1052 aa10.18□□□□□ -0.78
PROM1-217ENST00000514693 BBXQ8WY36 941 aaPredicted RBP10.17□□□□□ -0.78
PROM1-217ENST00000514693 HOXB3P14651 431 aaPredicted RBP10.16□□□□□ -0.78
PROM1-217ENST00000514693 TMEM92Q6UXU6 159 aa10.15□□□□□ -0.78
PROM1-217ENST00000514693 PAXIP1Q6ZW49 1069 aaPredicted RBP10.14□□□□□ -0.79
PROM1-217ENST00000514693 FAM205CA6NFA0 338 aa10.13□□□□□ -0.79
PROM1-217ENST00000514693 CHGAP10645 457 aaKnown RBP10.11□□□□□ -0.79
PROM1-217ENST00000514693 HS6ST3Q8IZP7 471 aa10.11□□□□□ -0.79
PROM1-217ENST00000514693 CFAP44Q96MT7 982 aa10.11□□□□□ -0.79
PROM1-217ENST00000514693 HOXB1P14653 301 aaPredicted RBP10.1□□□□□ -0.79
PROM1-217ENST00000514693 HS3ST6Q96QI5 342 aa10.09□□□□□ -0.79
PROM1-217ENST00000514693 ZSWIM6Q9HCJ5 1215 aa10.07□□□□□ -0.8
PROM1-217ENST00000514693 ERBB3P21860 1342 aa10.07□□□□□ -0.8
PROM1-217ENST00000514693 TMC2Q8TDI7 906 aa10.05□□□□□ -0.8
PROM1-217ENST00000514693 C2orf72A6NCS6 295 aa10.04□□□□□ -0.8
PROM1-217ENST00000514693 PPP1R37O75864 691 aa10.03□□□□□ -0.8
PROM1-217ENST00000514693 POTEB3A0JP26 581 aa10.01□□□□□ -0.81
PROM1-217ENST00000514693 POTEBQ6S5H4 581 aa10.01□□□□□ -0.81
PROM1-217ENST00000514693 TSHZ2Q9NRE2 1034 aa10.01□□□□□ -0.81
PROM1-217ENST00000514693 SPRYD3Q8NCJ5 442 aa10□□□□□ -0.81
PROM1-217ENST00000514693 RYDENQ9NUL5 291 aaKnown RBP10□□□□□ -0.81
PROM1-217ENST00000514693 KIF3CO14782 793 aa9.99□□□□□ -0.81
PROM1-217ENST00000514693 ARSIQ5FYB1 569 aa9.99□□□□□ -0.81
PROM1-217ENST00000514693 VARS2Q5ST30 1063 aaKnown RBP9.99□□□□□ -0.81
PROM1-217ENST00000514693 GPR153Q6NV75 609 aa9.99□□□□□ -0.81
PROM1-217ENST00000514693 SPNS2Q8IVW8 549 aa9.96□□□□□ -0.82
PROM1-217ENST00000514693 KRTAP3-3Q9BYR6 98 aa9.95□□□□□ -0.82
PROM1-217ENST00000514693 KRTAP3-2Q9BYR7 98 aa9.95□□□□□ -0.82
PROM1-217ENST00000514693 NKX1-1Q15270 411 aaPredicted RBP9.94□□□□□ -0.82
PROM1-217ENST00000514693 DNAJC5Q9H3Z4 198 aa9.94□□□□□ -0.82
PROM1-217ENST00000514693 MMRN1Q13201 1228 aa9.92□□□□□ -0.82
PROM1-217ENST00000514693 KHSRPQ92945 711 aaKnown RBP eCLIP9.92□□□□□ -0.82
PROM1-217ENST00000514693 SLC34A2O95436 690 aa9.9□□□□□ -0.82
PROM1-217ENST00000514693 PCDHGA4Q9Y5G9 962 aa9.9□□□□□ -0.82
PROM1-217ENST00000514693 ZNF316A6NFI3 1004 aaPredicted RBP9.89□□□□□ -0.83
PROM1-217ENST00000514693 NUDT7P0C024 238 aa9.89□□□□□ -0.83
PROM1-217ENST00000514693 ZNF687Q8N1G0 1237 aa9.89□□□□□ -0.83
PROM1-217ENST00000514693 GPHNQ9NQX3 736 aaPredicted RBP9.89□□□□□ -0.83
PROM1-217ENST00000514693 FOXK1P85037 733 aa9.87□□□□□ -0.83
PROM1-217ENST00000514693 NBR1Q14596 966 aa9.87□□□□□ -0.83
PROM1-217ENST00000514693 PLPP6Q8IY26 295 aa9.86□□□□□ -0.83
PROM1-217ENST00000514693 DSG2Q14126 1118 aa9.84□□□□□ -0.83
PROM1-217ENST00000514693 TIMELESSQ9UNS1 1208 aa9.83□□□□□ -0.84
PROM1-217ENST00000514693 LHX6Q9UPM6 363 aa9.82□□□□□ -0.84
PROM1-217ENST00000514693 GTPBP6O43824 516 aaPredicted RBP9.81□□□□□ -0.84
PROM1-217ENST00000514693 TBC1D12O60347 775 aa9.81□□□□□ -0.84
PROM1-217ENST00000514693 PTCD2Q8WV60 388 aaKnown RBP9.81□□□□□ -0.84
PROM1-217ENST00000514693 TULP1O00294 542 aaPredicted RBP9.8□□□□□ -0.84
PROM1-217ENST00000514693 ANKRD13DQ6ZTN6 518 aa9.79□□□□□ -0.84
PROM1-217ENST00000514693 PSDA5PKW4 1024 aaPredicted RBP9.78□□□□□ -0.84
PROM1-217ENST00000514693 PDE4AP27815 886 aa9.78□□□□□ -0.84
PROM1-217ENST00000514693 PBX2P40425 430 aa9.78□□□□□ -0.84
PROM1-217ENST00000514693 CRISPLD2Q9H0B8 497 aa9.77□□□□□ -0.85
PROM1-217ENST00000514693 PPP1R15BQ5SWA1 713 aa9.76□□□□□ -0.85
PROM1-217ENST00000514693 LSM11P83369 360 aaKnown RBP eCLIP9.75□□□□□ -0.85
PROM1-217ENST00000514693 GTF3C3Q9Y5Q9 886 aa9.75□□□□□ -0.85
PROM1-217ENST00000514693 PTGER2P43116 358 aa9.74□□□□□ -0.85
PROM1-217ENST00000514693 UPF1Q92900 1129 aaKnown RBP eCLIP9.74□□□□□ -0.85
PROM1-217ENST00000514693 MYT1LQ9UL68 1186 aa9.74□□□□□ -0.85
PROM1-217ENST00000514693 RNF166Q96A37 237 aaPredicted RBP9.73□□□□□ -0.85
PROM1-217ENST00000514693 NCKAP5LQ9HCH0 1330 aa9.73□□□□□ -0.85
PROM1-217ENST00000514693 LARP6Q9BRS8 491 aaKnown RBP9.72□□□□□ -0.85
PROM1-217ENST00000514693 AXIN2Q9Y2T1 843 aa9.72□□□□□ -0.85
PROM1-217ENST00000514693 KDM4FA0A1W2PPD8 638 aa9.71□□□□□ -0.86
PROM1-217ENST00000514693 PPP4R3BQ5MIZ7 849 aa9.71□□□□□ -0.86
PROM1-217ENST00000514693 DDX27Q96GQ7 796 aaKnown RBP9.71□□□□□ -0.86
PROM1-217ENST00000514693 OXER1Q8TDS5 423 aa9.7□□□□□ -0.86
PROM1-217ENST00000514693 ARHGAP33O14559 1287 aa9.69□□□□□ -0.86
PROM1-217ENST00000514693 KCNH8Q96L42 1107 aa9.68□□□□□ -0.86
PROM1-217ENST00000514693 POTEEQ6S8J3 1075 aa9.66□□□□□ -0.86
PROM1-217ENST00000514693 ERICH6Q7L0X2 663 aa9.64□□□□□ -0.87
PROM1-217ENST00000514693 ZNF454Q8N9F8 522 aa9.64□□□□□ -0.87
PROM1-217ENST00000514693 MAP3K9P80192 1104 aa9.63□□□□□ -0.87
PROM1-217ENST00000514693 MFSD10Q14728 455 aa9.63□□□□□ -0.87
PROM1-217ENST00000514693 ARXQ96QS3 562 aa9.63□□□□□ -0.87
PROM1-217ENST00000514693 PSEN2P49810 448 aa9.62□□□□□ -0.87
PROM1-217ENST00000514693 ADGRD1Q6QNK2 874 aa9.62□□□□□ -0.87
PROM1-217ENST00000514693 KCNK17Q96T54 332 aa9.62□□□□□ -0.87
PROM1-217ENST00000514693 EVI5O60447 810 aa9.61□□□□□ -0.87
PROM1-217ENST00000514693 CADPS2Q86UW7 1296 aa9.61□□□□□ -0.87
PROM1-217ENST00000514693 STAC3Q96MF2 364 aa9.59□□□□□ -0.87
PROM1-217ENST00000514693 TK2O00142 265 aa9.58□□□□□ -0.88
PROM1-217ENST00000514693 TMEM132AQ24JP5 1023 aa9.58□□□□□ -0.88
PROM1-217ENST00000514693 DMRTA1Q5VZB9 504 aa9.58□□□□□ -0.88
PROM1-217ENST00000514693 FOSBP53539 338 aa9.56□□□□□ -0.88
PROM1-217ENST00000514693 JPH4Q96JJ6 628 aa9.56□□□□□ -0.88
PROM1-217ENST00000514693 BCL2L12Q9HB09 334 aa9.56□□□□□ -0.88
PROM1-217ENST00000514693 ANO8Q9HCE9 1232 aaPredicted RBP9.56□□□□□ -0.88
PROM1-217ENST00000514693 EMILIN3Q9NT22 766 aa9.56□□□□□ -0.88
PROM1-217ENST00000514693 DAXXQ9UER7 740 aaPredicted RBP9.56□□□□□ -0.88
PROM1-217ENST00000514693 PTPREP23469 700 aa9.54□□□□□ -0.88
PROM1-217ENST00000514693 ZDHHC16Q969W1 377 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms