RNA–Protein interactions for RNA: ENST00000514493.5

SSBP2-218, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SSBP2, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-218ENST00000514493 KCNH8Q96L42 1107 aa29.82■■■□□ 2.36
SSBP2-218ENST00000514493 CFDP1Q9UEE9 299 aaPredicted RBP29.8■■■□□ 2.36
SSBP2-218ENST00000514493 ARAP3Q8WWN8 1544 aa29.78■■■□□ 2.36
SSBP2-218ENST00000514493 DNMT1P26358 1616 aaKnown RBP29.77■■■□□ 2.36
SSBP2-218ENST00000514493 ARHGAP5Q13017 1502 aa29.76■■■□□ 2.36
SSBP2-218ENST00000514493 SAMD9LQ8IVG5 1584 aa29.75■■■□□ 2.35
SSBP2-218ENST00000514493 PLCH2O75038 1416 aa29.74■■■□□ 2.35
SSBP2-218ENST00000514493 CROCC2H7BZ55 1655 aa29.72■■■□□ 2.35
SSBP2-218ENST00000514493 ITGAEP38570 1179 aa29.72■■■□□ 2.35
SSBP2-218ENST00000514493 ZNF644Q9H582 1327 aaPredicted RBP29.71■■■□□ 2.35
SSBP2-218ENST00000514493 FAM69CQ0P6D2 419 aa29.7■■■□□ 2.35
SSBP2-218ENST00000514493 PTPRKQ15262 1439 aa29.68■■■□□ 2.34
SSBP2-218ENST00000514493 DAPK1P53355 1430 aa29.67■■■□□ 2.34
SSBP2-218ENST00000514493 ARHGEF5Q12774 1597 aa29.66■■■□□ 2.34
SSBP2-218ENST00000514493 GLI2P10070 1586 aa29.66■■■□□ 2.34
SSBP2-218ENST00000514493 ZNF777Q9ULD5 760 aaPredicted RBP29.65■■■□□ 2.34
SSBP2-218ENST00000514493 DIP2BQ9P265 1576 aa29.64■■■□□ 2.34
SSBP2-218ENST00000514493 KIF13AQ9H1H9 1805 aa29.64■■■□□ 2.34
SSBP2-218ENST00000514493 PLEKHH2Q8IVE3 1493 aa29.63■■■□□ 2.33
SSBP2-218ENST00000514493 ABCC5O15440 1437 aa29.63■■■□□ 2.33
SSBP2-218ENST00000514493 MAP3K4Q9Y6R4 1608 aa29.62■■■□□ 2.33
SSBP2-218ENST00000514493 ABCC1P33527 1531 aa29.61■■■□□ 2.33
SSBP2-218ENST00000514493 SYCP2Q9BX26 1530 aa29.61■■■□□ 2.33
SSBP2-218ENST00000514493 ADGBQ8N7X0 1667 aa29.61■■■□□ 2.33
SSBP2-218ENST00000514493 CFAP74Q9C0B2 1584 aa29.6■■■□□ 2.33
SSBP2-218ENST00000514493 HRCP23327 699 aa29.59■■■□□ 2.33
SSBP2-218ENST00000514493 MBD5Q9P267 1494 aa29.59■■■□□ 2.33
SSBP2-218ENST00000514493 GCC2Q8IWJ2 1684 aa29.59■■■□□ 2.33
SSBP2-218ENST00000514493 FANCAO15360 1455 aa29.57■■■□□ 2.32
SSBP2-218ENST00000514493 SHANK2Q9UPX8 1470 aa29.57■■■□□ 2.32
SSBP2-218ENST00000514493 AKNAQ7Z591 1439 aa29.57■■■□□ 2.32
SSBP2-218ENST00000514493 KIAA1107Q9UPP5 1409 aa29.57■■■□□ 2.32
SSBP2-218ENST00000514493 EFCAB2Q5VUJ9 269 aa29.57■■■□□ 2.32
SSBP2-218ENST00000514493 CD109Q6YHK3 1445 aa29.56■■■□□ 2.32
SSBP2-218ENST00000514493 CCDC141Q6ZP82 1450 aa29.55■■■□□ 2.32
SSBP2-218ENST00000514493 HFM1A2PYH4 1435 aa29.54■■■□□ 2.32
SSBP2-218ENST00000514493 SETD5Q9C0A6 1442 aa29.51■■■□□ 2.32
SSBP2-218ENST00000514493 ROCK1Q13464 1354 aa29.51■■■□□ 2.31
SSBP2-218ENST00000514493 ADGRL2O95490 1459 aa29.51■■■□□ 2.31
SSBP2-218ENST00000514493 ARHGEF12Q9NZN5 1544 aa29.51■■■□□ 2.31
SSBP2-218ENST00000514493 MAST1Q9Y2H9 1570 aa29.48■■■□□ 2.31
SSBP2-218ENST00000514493 NAIPQ13075 1403 aa29.47■■■□□ 2.31
SSBP2-218ENST00000514493 C9orf84Q5VXU9 1444 aa29.47■■■□□ 2.31
SSBP2-218ENST00000514493 HNRNPMP52272 730 aaKnown RBP eCLIP29.47■■■□□ 2.311e-6■■■■□ 22.8
SSBP2-218ENST00000514493 RAB3GAP2Q9H2M9 1393 aa29.46■■■□□ 2.31
SSBP2-218ENST00000514493 RSPH4AQ5TD94 716 aa29.46■■■□□ 2.31
SSBP2-218ENST00000514493 CHIC2Q9UKJ5 165 aa29.45■■■□□ 2.31
SSBP2-218ENST00000514493 ADGRL1O94910 1474 aa29.45■■■□□ 2.3
SSBP2-218ENST00000514493 TSPOAP1O95153 1857 aa29.44■■■□□ 2.3
SSBP2-218ENST00000514493 PPRC1Q5VV67 1664 aaKnown RBP29.43■■■□□ 2.3
SSBP2-218ENST00000514493 NEO1Q92859 1461 aa29.43■■■□□ 2.3
SSBP2-218ENST00000514493 NCOA1Q15788 1441 aa29.4■■■□□ 2.3
SSBP2-218ENST00000514493 TRAPPC8Q9Y2L5 1435 aa29.38■■■□□ 2.29
SSBP2-218ENST00000514493 PLXNC1O60486 1568 aa29.38■■■□□ 2.29
SSBP2-218ENST00000514493 ANKRD30AQ9BXX3 1397 aa29.37■■■□□ 2.29
SSBP2-218ENST00000514493 TSPY4P0CV99 314 aa29.36■■■□□ 2.29
SSBP2-218ENST00000514493 TSPY10P0CW01 314 aa29.36■■■□□ 2.29
SSBP2-218ENST00000514493 RRP7BPQ9NSQ0 103 aa29.36■■■□□ 2.29
SSBP2-218ENST00000514493 SCAPERQ9BY12 1400 aa29.35■■■□□ 2.29
SSBP2-218ENST00000514493 KDM6BO15054 1643 aa29.35■■■□□ 2.29
SSBP2-218ENST00000514493 CCER1Q8TC90 406 aaPredicted RBP29.34■■■□□ 2.29
SSBP2-218ENST00000514493 ZFYVE16Q7Z3T8 1539 aa29.33■■■□□ 2.29
SSBP2-218ENST00000514493 INO80Q9ULG1 1556 aaPredicted RBP29.32■■■□□ 2.28
SSBP2-218ENST00000514493 ZEB1P37275 1124 aaPredicted RBP29.31■■■□□ 2.28
SSBP2-218ENST00000514493 TEX14Q8IWB6 1497 aa29.31■■■□□ 2.28
SSBP2-218ENST00000514493 ZNF518AQ6AHZ1 1483 aa29.29■■■□□ 2.28
SSBP2-218ENST00000514493 POGZQ7Z3K3 1410 aa29.29■■■□□ 2.28
SSBP2-218ENST00000514493 KDM5CP41229 1560 aa29.29■■■□□ 2.28
SSBP2-218ENST00000514493 RTEL1-TNFRSF6BF6WH68 1400 aa29.27■■■□□ 2.28
SSBP2-218ENST00000514493 KIF15Q9NS87 1388 aa29.27■■■□□ 2.28
SSBP2-218ENST00000514493 RICTORQ6R327 1708 aa29.26■■■□□ 2.28
SSBP2-218ENST00000514493 ATP7AQ04656 1500 aa29.26■■■□□ 2.27
SSBP2-218ENST00000514493 DHX57Q6P158 1386 aaKnown RBP29.25■■■□□ 2.27
SSBP2-218ENST00000514493 AFAP1Q8N556 730 aa29.22■■■□□ 2.27
SSBP2-218ENST00000514493 DENND4BO75064 1496 aaPredicted RBP29.22■■■□□ 2.27
SSBP2-218ENST00000514493 ANKRD50Q9ULJ7 1429 aa29.22■■■□□ 2.27
SSBP2-218ENST00000514493 KIDINS220Q9ULH0 1771 aa29.21■■■□□ 2.27
SSBP2-218ENST00000514493 SPAG9O60271 1321 aaKnown RBP29.21■■■□□ 2.27
SSBP2-218ENST00000514493 HECW2Q9P2P5 1572 aa29.21■■■□□ 2.27
SSBP2-218ENST00000514493 DUOX2Q9NRD8 1548 aa29.2■■■□□ 2.26
SSBP2-218ENST00000514493 FRMPD1Q5SYB0 1578 aa29.18■■■□□ 2.26
SSBP2-218ENST00000514493 COL17A1Q9UMD9 1497 aaPredicted RBP29.18■■■□□ 2.26
SSBP2-218ENST00000514493 ACIN1Q9UKV3 1341 aaKnown RBP29.16■■■□□ 2.26
SSBP2-218ENST00000514493 MLH3Q9UHC1 1453 aa29.15■■■□□ 2.26
SSBP2-218ENST00000514493 ERBINQ96RT1 1412 aa29.13■■■□□ 2.25
SSBP2-218ENST00000514493 ZMYM4Q5VZL5 1548 aa29.11■■■□□ 2.25
SSBP2-218ENST00000514493 ABCA6Q8N139 1617 aa29.09■■■□□ 2.25
SSBP2-218ENST00000514493 UNC13BO14795 1591 aa29.09■■■□□ 2.25
SSBP2-218ENST00000514493 CLSPNQ9HAW4 1339 aa29.08■■■□□ 2.25
SSBP2-218ENST00000514493 KDM5DQ9BY66 1539 aa29.07■■■□□ 2.24
SSBP2-218ENST00000514493 EIF2AK4Q9P2K8 1649 aaKnown RBP29.06■■■□□ 2.24
SSBP2-218ENST00000514493 RAPGEF3O95398 923 aa29.05■■■□□ 2.24
SSBP2-218ENST00000514493 DIP2CQ9Y2E4 1556 aa29.03■■■□□ 2.24
SSBP2-218ENST00000514493 TRIM52Q96A61 297 aa29.02■■■□□ 2.24
SSBP2-218ENST00000514493 MAGI2Q86UL8 1455 aa29.01■■■□□ 2.23
SSBP2-218ENST00000514493 MYT1LQ9UL68 1186 aa29.01■■■□□ 2.23
SSBP2-218ENST00000514493 PZPP20742 1482 aa29■■■□□ 2.23
SSBP2-218ENST00000514493 DEPDC5O75140 1603 aa29■■■□□ 2.23
SSBP2-218ENST00000514493 BCORL1Q5H9F3 1711 aa28.97■■■□□ 2.23
SSBP2-218ENST00000514493 A2MP01023 1474 aa28.97■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms