RNA–Protein interactions for RNA: ENST00000514119.5

TMEM173-212, Transcript of transmembrane protein 173, humanhuman

TSL 3

Gene TMEM173, Length 1,114 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM173-212ENST00000514119 ITSN2Q9NZM3 1697 aa28.3■■■□□ 2.12
TMEM173-212ENST00000514119 MYOM3Q5VTT5 1437 aa28.27■■■□□ 2.12
TMEM173-212ENST00000514119 ARHGAP5Q13017 1502 aa28.25■■■□□ 2.11
TMEM173-212ENST00000514119 FANCAO15360 1455 aa28.25■■■□□ 2.11
TMEM173-212ENST00000514119 TEX14Q8IWB6 1497 aa28.25■■■□□ 2.11
TMEM173-212ENST00000514119 NEO1Q92859 1461 aa28.24■■■□□ 2.11
TMEM173-212ENST00000514119 EFCAB2Q5VUJ9 269 aa28.23■■■□□ 2.11
TMEM173-212ENST00000514119 SAMD9LQ8IVG5 1584 aa28.21■■■□□ 2.11
TMEM173-212ENST00000514119 MIA2Q96PC5 1412 aa28.21■■■□□ 2.11
TMEM173-212ENST00000514119 CFDP1Q9UEE9 299 aaPredicted RBP28.21■■■□□ 2.11
TMEM173-212ENST00000514119 CFAP74Q9C0B2 1584 aa28.2■■■□□ 2.11
TMEM173-212ENST00000514119 AKNAQ7Z591 1439 aa28.2■■■□□ 2.11
TMEM173-212ENST00000514119 FGD6Q6ZV73 1430 aa28.18■■■□□ 2.1
TMEM173-212ENST00000514119 ZNF644Q9H582 1327 aaPredicted RBP28.16■■■□□ 2.1
TMEM173-212ENST00000514119 COL17A1Q9UMD9 1497 aaPredicted RBP28.15■■■□□ 2.1
TMEM173-212ENST00000514119 ARHGEF12Q9NZN5 1544 aa28.15■■■□□ 2.1
TMEM173-212ENST00000514119 ABCC1P33527 1531 aa28.14■■■□□ 2.1
TMEM173-212ENST00000514119 PTPN23Q9H3S7 1636 aa28.13■■■□□ 2.09
TMEM173-212ENST00000514119 TCOF1Q13428 1488 aaKnown RBP28.13■■■□□ 2.09
TMEM173-212ENST00000514119 ZNF777Q9ULD5 760 aaPredicted RBP28.12■■■□□ 2.09
TMEM173-212ENST00000514119 ADGRL1O94910 1474 aa28.11■■■□□ 2.09
TMEM173-212ENST00000514119 CAMSAP2Q08AD1 1489 aa28.11■■■□□ 2.09
TMEM173-212ENST00000514119 KIAA1107Q9UPP5 1409 aa28.09■■■□□ 2.09
TMEM173-212ENST00000514119 SCAPERQ9BY12 1400 aa28.09■■■□□ 2.09
TMEM173-212ENST00000514119 RRBP1Q9P2E9 1410 aaKnown RBP28.09■■■□□ 2.09
TMEM173-212ENST00000514119 MBD5Q9P267 1494 aa28.08■■■□□ 2.09
TMEM173-212ENST00000514119 PLEKHH2Q8IVE3 1493 aa28.07■■■□□ 2.08
TMEM173-212ENST00000514119 SYCP2Q9BX26 1530 aa28.06■■■□□ 2.08
TMEM173-212ENST00000514119 RICTORQ6R327 1708 aa28.05■■■□□ 2.08
TMEM173-212ENST00000514119 HNRNPMP52272 730 aaKnown RBP eCLIP28.04■■■□□ 2.08
TMEM173-212ENST00000514119 FRMPD1Q5SYB0 1578 aa28.03■■■□□ 2.08
TMEM173-212ENST00000514119 TRAPPC8Q9Y2L5 1435 aa28.03■■■□□ 2.08
TMEM173-212ENST00000514119 KDM6BO15054 1643 aa28.03■■■□□ 2.08
TMEM173-212ENST00000514119 DENND4BO75064 1496 aaPredicted RBP28.02■■■□□ 2.08
TMEM173-212ENST00000514119 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28■■■□□ 2.07
TMEM173-212ENST00000514119 ARHGEF5Q12774 1597 aa28■■■□□ 2.07
TMEM173-212ENST00000514119 POGZQ7Z3K3 1410 aa28■■■□□ 2.07
TMEM173-212ENST00000514119 RAPGEF3O95398 923 aa27.99■■■□□ 2.07
TMEM173-212ENST00000514119 KDM5CP41229 1560 aa27.96■■■□□ 2.07
TMEM173-212ENST00000514119 AFAP1Q8N556 730 aa27.96■■■□□ 2.07
TMEM173-212ENST00000514119 DNMT1P26358 1616 aaKnown RBP27.95■■■□□ 2.06
TMEM173-212ENST00000514119 FAM50AQ14320 339 aaKnown RBP27.94■■■□□ 2.06
TMEM173-212ENST00000514119 ZNF518AQ6AHZ1 1483 aa27.94■■■□□ 2.06
TMEM173-212ENST00000514119 ABCC5O15440 1437 aa27.93■■■□□ 2.06
TMEM173-212ENST00000514119 RSPH4AQ5TD94 716 aa27.93■■■□□ 2.06
TMEM173-212ENST00000514119 CCDC141Q6ZP82 1450 aa27.93■■■□□ 2.06
TMEM173-212ENST00000514119 ZMYM4Q5VZL5 1548 aa27.92■■■□□ 2.06
TMEM173-212ENST00000514119 DAPK1P53355 1430 aa27.9■■■□□ 2.06
TMEM173-212ENST00000514119 CROCC2H7BZ55 1655 aa27.9■■■□□ 2.06
TMEM173-212ENST00000514119 PTPRKQ15262 1439 aa27.87■■■□□ 2.05
TMEM173-212ENST00000514119 MLH3Q9UHC1 1453 aa27.87■■■□□ 2.05
TMEM173-212ENST00000514119 MAST1Q9Y2H9 1570 aa27.86■■■□□ 2.05
TMEM173-212ENST00000514119 KIDINS220Q9ULH0 1771 aa27.86■■■□□ 2.05
TMEM173-212ENST00000514119 INO80Q9ULG1 1556 aaPredicted RBP27.86■■■□□ 2.05
TMEM173-212ENST00000514119 HECW2Q9P2P5 1572 aa27.83■■■□□ 2.05
TMEM173-212ENST00000514119 RTEL1-TNFRSF6BF6WH68 1400 aa27.83■■■□□ 2.05
TMEM173-212ENST00000514119 SHANK2Q9UPX8 1470 aa27.83■■■□□ 2.04
TMEM173-212ENST00000514119 MAGI2Q86UL8 1455 aa27.82■■■□□ 2.04
TMEM173-212ENST00000514119 ZFYVE16Q7Z3T8 1539 aa27.82■■■□□ 2.04
TMEM173-212ENST00000514119 SPAG9O60271 1321 aaKnown RBP27.81■■■□□ 2.04
TMEM173-212ENST00000514119 ATP7AQ04656 1500 aa27.8■■■□□ 2.04
TMEM173-212ENST00000514119 C9orf84Q5VXU9 1444 aa27.79■■■□□ 2.04
TMEM173-212ENST00000514119 YEATS2Q9ULM3 1422 aa27.79■■■□□ 2.04
TMEM173-212ENST00000514119 TSPY4P0CV99 314 aa27.78■■■□□ 2.04
TMEM173-212ENST00000514119 TSPY10P0CW01 314 aa27.78■■■□□ 2.04
TMEM173-212ENST00000514119 ABCA6Q8N139 1617 aa27.77■■■□□ 2.04
TMEM173-212ENST00000514119 DIP2CQ9Y2E4 1556 aa27.75■■■□□ 2.03
TMEM173-212ENST00000514119 ADGRL2O95490 1459 aa27.75■■■□□ 2.03
TMEM173-212ENST00000514119 ARHGEF40Q8TER5 1519 aa27.73■■■□□ 2.03
TMEM173-212ENST00000514119 ADGBQ8N7X0 1667 aa27.73■■■□□ 2.03
TMEM173-212ENST00000514119 ITGAEP38570 1179 aa27.72■■■□□ 2.03
TMEM173-212ENST00000514119 CHIC2Q9UKJ5 165 aa27.72■■■□□ 2.03
TMEM173-212ENST00000514119 PLXNC1O60486 1568 aa27.72■■■□□ 2.03
TMEM173-212ENST00000514119 NCOA1Q15788 1441 aa27.71■■■□□ 2.03
TMEM173-212ENST00000514119 KDM4FA0A1W2PPD8 638 aa27.69■■■□□ 2.02
TMEM173-212ENST00000514119 ROCK1Q13464 1354 aa27.68■■■□□ 2.02
TMEM173-212ENST00000514119 ATP10AO60312 1499 aa27.68■■■□□ 2.02
TMEM173-212ENST00000514119 SIGLEC1Q9BZZ2 1709 aa27.67■■■□□ 2.02
TMEM173-212ENST00000514119 REREQ9P2R6 1566 aa27.66■■■□□ 2.02
TMEM173-212ENST00000514119 MYT1LQ9UL68 1186 aa27.65■■■□□ 2.02
TMEM173-212ENST00000514119 ANKRD30AQ9BXX3 1397 aa27.64■■■□□ 2.02
TMEM173-212ENST00000514119 TRIM26Q12899 539 aaPredicted RBP27.64■■■□□ 2.02
TMEM173-212ENST00000514119 A2MP01023 1474 aa27.62■■■□□ 2.01
TMEM173-212ENST00000514119 RRP7BPQ9NSQ0 103 aa27.61■■■□□ 2.01
TMEM173-212ENST00000514119 DHX29Q7Z478 1369 aaKnown RBP27.6■■■□□ 2.01
TMEM173-212ENST00000514119 KIF15Q9NS87 1388 aa27.6■■■□□ 2.01
TMEM173-212ENST00000514119 DUOX2Q9NRD8 1548 aa27.59■■■□□ 2.01
TMEM173-212ENST00000514119 NAIPQ13075 1403 aa27.56■■■□□ 2
TMEM173-212ENST00000514119 AGLP35573 1532 aa27.56■■■□□ 2
TMEM173-212ENST00000514119 BCORL1Q5H9F3 1711 aa27.54■■■□□ 2
TMEM173-212ENST00000514119 GCC2Q8IWJ2 1684 aa27.54■■■□□ 2
TMEM173-212ENST00000514119 HFM1A2PYH4 1435 aa27.53■■■□□ 2
TMEM173-212ENST00000514119 ERBINQ96RT1 1412 aa27.5■■□□□ 1.99
TMEM173-212ENST00000514119 EIF2AK4Q9P2K8 1649 aaKnown RBP27.5■■□□□ 1.99
TMEM173-212ENST00000514119 ANKRD50Q9ULJ7 1429 aa27.5■■□□□ 1.99
TMEM173-212ENST00000514119 RNF17Q9BXT8 1623 aaKnown RBP27.43■■□□□ 1.98
TMEM173-212ENST00000514119 MROH1Q8NDA8 1641 aa27.42■■□□□ 1.98
TMEM173-212ENST00000514119 KIF3BO15066 747 aa27.42■■□□□ 1.98
TMEM173-212ENST00000514119 SETD5Q9C0A6 1442 aa27.41■■□□□ 1.98
TMEM173-212ENST00000514119 DEPDC5O75140 1603 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms