RNA–Protein interactions for RNA: ENST00000513956.5

CCND3-219, Transcript of cyclin D3, humanhuman

TSL 2

Gene CCND3, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-219ENST00000513956 FYCO1Q9BQS8 1478 aa29.43■■■□□ 2.3
CCND3-219ENST00000513956 ADAMTSL3P82987 1691 aa29.41■■■□□ 2.3
CCND3-219ENST00000513956 BCORL1Q5H9F3 1711 aa29.41■■■□□ 2.3
CCND3-219ENST00000513956 ZFYVE16Q7Z3T8 1539 aa29.4■■■□□ 2.3
CCND3-219ENST00000513956 CDC42BPBQ9Y5S2 1711 aa29.4■■■□□ 2.3
CCND3-219ENST00000513956 POGZQ7Z3K3 1410 aa29.4■■■□□ 2.3
CCND3-219ENST00000513956 ZMYM4Q5VZL5 1548 aa29.4■■■□□ 2.3
CCND3-219ENST00000513956 HECW2Q9P2P5 1572 aa29.39■■■□□ 2.3
CCND3-219ENST00000513956 SIGLEC1Q9BZZ2 1709 aa29.39■■■□□ 2.3
CCND3-219ENST00000513956 MADDQ8WXG6 1647 aa29.37■■■□□ 2.29
CCND3-219ENST00000513956 MLECQ14165 292 aa29.34■■■□□ 2.29
CCND3-219ENST00000513956 PLPPR3Q6T4P5 718 aa29.34■■■□□ 2.29
CCND3-219ENST00000513956 AFAP1Q8N556 730 aa29.34■■■□□ 2.29
CCND3-219ENST00000513956 PTPRMP28827 1452 aa29.34■■■□□ 2.29
CCND3-219ENST00000513956 LOC105371045A0A1W2PR82 267 aa29.33■■■□□ 2.29
CCND3-219ENST00000513956 MYT1LQ9UL68 1186 aa29.33■■■□□ 2.29
CCND3-219ENST00000513956 PREX2Q70Z35 1606 aa29.32■■■□□ 2.28
CCND3-219ENST00000513956 CEP162Q5TB80 1403 aa29.31■■■□□ 2.28
CCND3-219ENST00000513956 CDC42BPAQ5VT25 1732 aa29.31■■■□□ 2.28
CCND3-219ENST00000513956 RIMS1Q86UR5 1692 aaKnown RBP29.3■■■□□ 2.28
CCND3-219ENST00000513956 MAGI2Q86UL8 1455 aa29.29■■■□□ 2.28
CCND3-219ENST00000513956 ZNF777Q9ULD5 760 aaPredicted RBP29.28■■■□□ 2.28
CCND3-219ENST00000513956 ZNF518AQ6AHZ1 1483 aa29.25■■■□□ 2.27
CCND3-219ENST00000513956 ARHGEF12Q9NZN5 1544 aa29.24■■■□□ 2.27
CCND3-219ENST00000513956 ATP10AO60312 1499 aa29.23■■■□□ 2.27
CCND3-219ENST00000513956 TRAPPC8Q9Y2L5 1435 aa29.21■■■□□ 2.27
CCND3-219ENST00000513956 ABCC1P33527 1531 aa29.21■■■□□ 2.27
CCND3-219ENST00000513956 ITSN2Q9NZM3 1697 aa29.21■■■□□ 2.27
CCND3-219ENST00000513956 KDM5CP41229 1560 aa29.2■■■□□ 2.26
CCND3-219ENST00000513956 MTUS2Q5JR59 1369 aa29.19■■■□□ 2.26
CCND3-219ENST00000513956 C9orf84Q5VXU9 1444 aa29.19■■■□□ 2.26
CCND3-219ENST00000513956 GPATCH8Q9UKJ3 1502 aaKnown RBP29.17■■■□□ 2.26
CCND3-219ENST00000513956 FER1L4A9Z1Z3 1794 aa29.16■■■□□ 2.26
CCND3-219ENST00000513956 SAMD9LQ8IVG5 1584 aa29.15■■■□□ 2.26
CCND3-219ENST00000513956 DIP2CQ9Y2E4 1556 aa29.13■■■□□ 2.25
CCND3-219ENST00000513956 ABCA6Q8N139 1617 aa29.13■■■□□ 2.25
CCND3-219ENST00000513956 HNRNPMP52272 730 aaKnown RBP eCLIP29.13■■■□□ 2.25
CCND3-219ENST00000513956 CCNB3Q8WWL7 1395 aa29.13■■■□□ 2.25
CCND3-219ENST00000513956 CFDP1Q9UEE9 299 aaPredicted RBP29.11■■■□□ 2.25
CCND3-219ENST00000513956 SYCP2Q9BX26 1530 aa29.1■■■□□ 2.25
CCND3-219ENST00000513956 MLH3Q9UHC1 1453 aa29.08■■■□□ 2.25
CCND3-219ENST00000513956 KIDINS220Q9ULH0 1771 aa29.06■■■□□ 2.24
CCND3-219ENST00000513956 EHBP1L1Q8N3D4 1523 aa29.05■■■□□ 2.24
CCND3-219ENST00000513956 ZNF644Q9H582 1327 aaPredicted RBP29.03■■■□□ 2.24
CCND3-219ENST00000513956 CEBPAP49715 358 aaPredicted RBP29.03■■■□□ 2.24
CCND3-219ENST00000513956 TIAM1Q13009 1591 aa29.03■■■□□ 2.24
CCND3-219ENST00000513956 LMTK3Q96Q04 1460 aa29.02■■■□□ 2.24
CCND3-219ENST00000513956 SPAG9O60271 1321 aaKnown RBP28.99■■■□□ 2.23
CCND3-219ENST00000513956 HSPA2P54652 639 aa28.99■■■□□ 2.23
CCND3-219ENST00000513956 REREQ9P2R6 1566 aa28.96■■■□□ 2.23
CCND3-219ENST00000513956 VPS8Q8N3P4 1428 aa28.95■■■□□ 2.23
CCND3-219ENST00000513956 SUPT6HQ7KZ85 1726 aaKnown RBP28.94■■■□□ 2.22
CCND3-219ENST00000513956 PLEKHH2Q8IVE3 1493 aa28.93■■■□□ 2.22
CCND3-219ENST00000513956 KIAA1107Q9UPP5 1409 aa28.93■■■□□ 2.22
CCND3-219ENST00000513956 NCOA2Q15596 1464 aa28.92■■■□□ 2.22
CCND3-219ENST00000513956 ATP7AQ04656 1500 aa28.91■■■□□ 2.22
CCND3-219ENST00000513956 ILDR1Q86SU0 546 aaPredicted RBP28.9■■■□□ 2.22
CCND3-219ENST00000513956 ESF1Q9H501 851 aaKnown RBP28.89■■■□□ 2.22
CCND3-219ENST00000513956 AGLP35573 1532 aa28.89■■■□□ 2.21
CCND3-219ENST00000513956 INO80Q9ULG1 1556 aaPredicted RBP28.88■■■□□ 2.21
CCND3-219ENST00000513956 KANK4Q5T7N3 995 aaPredicted RBP28.85■■■□□ 2.21
CCND3-219ENST00000513956 C3P01024 1663 aa28.85■■■□□ 2.21
CCND3-219ENST00000513956 LRRC9Q6ZRR7 1453 aa28.83■■■□□ 2.21
CCND3-219ENST00000513956 MBD5Q9P267 1494 aa28.83■■■□□ 2.21
CCND3-219ENST00000513956 PREX1Q8TCU6 1659 aa28.82■■■□□ 2.2
CCND3-219ENST00000513956 A2MP01023 1474 aa28.8■■■□□ 2.2
CCND3-219ENST00000513956 CAMSAP2Q08AD1 1489 aa28.8■■■□□ 2.2
CCND3-219ENST00000513956 GGT6Q6P531 493 aa28.77■■■□□ 2.2
CCND3-219ENST00000513956 ADGBQ8N7X0 1667 aa28.76■■■□□ 2.19
CCND3-219ENST00000513956 PLXNC1O60486 1568 aa28.75■■■□□ 2.19
CCND3-219ENST00000513956 CLTCQ00610 1675 aaKnown RBP28.73■■■□□ 2.19
CCND3-219ENST00000513956 CCDC141Q6ZP82 1450 aa28.72■■■□□ 2.19
CCND3-219ENST00000513956 UHRF1BP1Q6BDS2 1440 aa28.71■■■□□ 2.19
CCND3-219ENST00000513956 SETD1BQ9UPS6 1966 aaKnown RBP28.7■■■□□ 2.18
CCND3-219ENST00000513956 CNTLNQ9NXG0 1405 aa28.69■■■□□ 2.18
CCND3-219ENST00000513956 MAP3K1Q13233 1512 aa28.68■■■□□ 2.18
CCND3-219ENST00000513956 ZMYM3Q14202 1370 aa28.67■■■□□ 2.18
CCND3-219ENST00000513956 APLP2Q06481 763 aa28.67■■■□□ 2.18
CCND3-219ENST00000513956 RTEL1-TNFRSF6BF6WH68 1400 aa28.67■■■□□ 2.18
CCND3-219ENST00000513956 MROH2AA6NES4 1674 aa28.65■■■□□ 2.18
CCND3-219ENST00000513956 DHX29Q7Z478 1369 aaKnown RBP28.62■■■□□ 2.17
CCND3-219ENST00000513956 TSPY4P0CV99 314 aa28.62■■■□□ 2.17
CCND3-219ENST00000513956 TSPY10P0CW01 314 aa28.62■■■□□ 2.17
CCND3-219ENST00000513956 ARHGEF5Q12774 1597 aa28.62■■■□□ 2.17
CCND3-219ENST00000513956 STRCQ7RTU9 1775 aa28.61■■■□□ 2.17
CCND3-219ENST00000513956 KIF3BO15066 747 aa28.61■■■□□ 2.17
CCND3-219ENST00000513956 RSPH4AQ5TD94 716 aa28.61■■■□□ 2.17
CCND3-219ENST00000513956 MYOM3Q5VTT5 1437 aa28.6■■■□□ 2.17
CCND3-219ENST00000513956 NPATQ14207 1427 aa28.52■■■□□ 2.16
CCND3-219ENST00000513956 MIA2Q96PC5 1412 aa28.52■■■□□ 2.16
CCND3-219ENST00000513956 FBXO41Q8TF61 875 aa28.51■■■□□ 2.15
CCND3-219ENST00000513956 PTPRKQ15262 1439 aa28.51■■■□□ 2.15
CCND3-219ENST00000513956 MYO3AQ8NEV4 1616 aa28.48■■■□□ 2.15
CCND3-219ENST00000513956 PPP6R1Q9UPN7 881 aa28.48■■■□□ 2.15
CCND3-219ENST00000513956 PTPN23Q9H3S7 1636 aa28.47■■■□□ 2.15
CCND3-219ENST00000513956 WASHC2CQ9Y4E1 1318 aa28.46■■■□□ 2.15
CCND3-219ENST00000513956 MAST1Q9Y2H9 1570 aa28.46■■■□□ 2.15
CCND3-219ENST00000513956 FBXO31Q5XUX0 539 aaPredicted RBP28.46■■■□□ 2.15
CCND3-219ENST00000513956 CAMSAP1Q5T5Y3 1602 aa28.46■■■□□ 2.15
CCND3-219ENST00000513956 DMRT2Q9Y5R5 561 aa28.45■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms