RNA–Protein interactions for RNA: ENST00000513917.5

WDR41-223, Transcript of WD repeat domain 41, human

TSL 4

Gene WDR41, Length 596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
WDR41-223	ENST00000513917	HS3ST6	Q96QI5	342 aa		13.15	□□□□□ -0.3
WDR41-223	ENST00000513917	HOXB1	P14653	301 aa	Predicted RBP	13.13	□□□□□ -0.31
WDR41-223	ENST00000513917	ZSWIM6	Q9HCJ5	1215 aa		13.1	□□□□□ -0.31
WDR41-223	ENST00000513917	ERBB3	P21860	1342 aa		13.07	□□□□□ -0.32
WDR41-223	ENST00000513917	HS6ST3	Q8IZP7	471 aa		13.05	□□□□□ -0.32
WDR41-223	ENST00000513917	POTEB3	A0JP26	581 aa		13.04	□□□□□ -0.32
WDR41-223	ENST00000513917	POTEB	Q6S5H4	581 aa		13.04	□□□□□ -0.32
WDR41-223	ENST00000513917	CHGA	P10645	457 aa	Known RBP	13.01	□□□□□ -0.33
WDR41-223	ENST00000513917	SPNS2	Q8IVW8	549 aa		13.01	□□□□□ -0.33
WDR41-223	ENST00000513917	C2orf72	A6NCS6	295 aa		13	□□□□□ -0.33
WDR41-223	ENST00000513917	TMC2	Q8TDI7	906 aa		13	□□□□□ -0.33
WDR41-223	ENST00000513917	GPR153	Q6NV75	609 aa		12.99	□□□□□ -0.33
WDR41-223	ENST00000513917	KIF3C	O14782	793 aa		12.98	□□□□□ -0.33
WDR41-223	ENST00000513917	VARS2	Q5ST30	1063 aa	Known RBP	12.98	□□□□□ -0.33
WDR41-223	ENST00000513917	KRTAP3-3	Q9BYR6	98 aa		12.98	□□□□□ -0.33
WDR41-223	ENST00000513917	KRTAP3-2	Q9BYR7	98 aa		12.98	□□□□□ -0.33
WDR41-223	ENST00000513917	PPP1R37	O75864	691 aa		12.96	□□□□□ -0.33
WDR41-223	ENST00000513917	MMRN1	Q13201	1228 aa		12.96	□□□□□ -0.33
WDR41-223	ENST00000513917	ARSI	Q5FYB1	569 aa		12.96	□□□□□ -0.33
WDR41-223	ENST00000513917	RYDEN	Q9NUL5	291 aa	Known RBP	12.9	□□□□□ -0.34
WDR41-223	ENST00000513917	ZNF687	Q8N1G0	1237 aa		12.87	□□□□□ -0.35
WDR41-223	ENST00000513917	KHSRP	Q92945	711 aa	Known RBP eCLIP	12.87	□□□□□ -0.35	4e-7	■■□□□ 12.5
WDR41-223	ENST00000513917	SLC34A2	O95436	690 aa		12.86	□□□□□ -0.35
WDR41-223	ENST00000513917	ZNF316	A6NFI3	1004 aa	Predicted RBP	12.85	□□□□□ -0.35
WDR41-223	ENST00000513917	DNAJC5	Q9H3Z4	198 aa		12.85	□□□□□ -0.35
WDR41-223	ENST00000513917	NUDT7	P0C024	238 aa		12.83	□□□□□ -0.36
WDR41-223	ENST00000513917	PCDHGA4	Q9Y5G9	962 aa		12.83	□□□□□ -0.36
WDR41-223	ENST00000513917	DCAF8L2	P0C7V8	631 aa		12.81	□□□□□ -0.36
WDR41-223	ENST00000513917	NKX1-1	Q15270	411 aa	Predicted RBP	12.81	□□□□□ -0.36
WDR41-223	ENST00000513917	GPHN	Q9NQX3	736 aa	Predicted RBP	12.79	□□□□□ -0.36
WDR41-223	ENST00000513917	FOXK1	P85037	733 aa		12.78	□□□□□ -0.36
WDR41-223	ENST00000513917	PLPP6	Q8IY26	295 aa		12.76	□□□□□ -0.37
WDR41-223	ENST00000513917	LHX6	Q9UPM6	363 aa		12.75	□□□□□ -0.37
WDR41-223	ENST00000513917	DSG2	Q14126	1118 aa		12.72	□□□□□ -0.37
WDR41-223	ENST00000513917	PTCD2	Q8WV60	388 aa	Known RBP	12.72	□□□□□ -0.37
WDR41-223	ENST00000513917	PBX2	P40425	430 aa		12.71	□□□□□ -0.37
WDR41-223	ENST00000513917	PSD	A5PKW4	1024 aa	Predicted RBP	12.7	□□□□□ -0.38
WDR41-223	ENST00000513917	TBC1D12	O60347	775 aa		12.7	□□□□□ -0.38
WDR41-223	ENST00000513917	ANKRD13D	Q6ZTN6	518 aa		12.7	□□□□□ -0.38
WDR41-223	ENST00000513917	PTGER2	P43116	358 aa		12.69	□□□□□ -0.38
WDR41-223	ENST00000513917	RNF166	Q96A37	237 aa	Predicted RBP	12.69	□□□□□ -0.38
WDR41-223	ENST00000513917	LSM11	P83369	360 aa	Known RBP eCLIP	12.68	□□□□□ -0.38
WDR41-223	ENST00000513917	MYT1L	Q9UL68	1186 aa		12.68	□□□□□ -0.38
WDR41-223	ENST00000513917	GTPBP6	O43824	516 aa	Predicted RBP	12.65	□□□□□ -0.38
WDR41-223	ENST00000513917	CRISPLD2	Q9H0B8	497 aa		12.64	□□□□□ -0.39
WDR41-223	ENST00000513917	PDE4A	P27815	886 aa		12.63	□□□□□ -0.39
WDR41-223	ENST00000513917	PPP1R15B	Q5SWA1	713 aa		12.62	□□□□□ -0.39
WDR41-223	ENST00000513917	AXIN2	Q9Y2T1	843 aa		12.61	□□□□□ -0.39
WDR41-223	ENST00000513917	KDM4F	A0A1W2PPD8	638 aa		12.6	□□□□□ -0.39
WDR41-223	ENST00000513917	PPP4R3B	Q5MIZ7	849 aa		12.59	□□□□□ -0.39
WDR41-223	ENST00000513917	UPF1	Q92900	1129 aa	Known RBP eCLIP	12.59	□□□□□ -0.39
WDR41-223	ENST00000513917	ARHGAP33	O14559	1287 aa		12.58	□□□□□ -0.4
WDR41-223	ENST00000513917	NCKAP5L	Q9HCH0	1330 aa		12.58	□□□□□ -0.4
WDR41-223	ENST00000513917	OXER1	Q8TDS5	423 aa		12.57	□□□□□ -0.4
WDR41-223	ENST00000513917	POTEE	Q6S8J3	1075 aa		12.56	□□□□□ -0.4
WDR41-223	ENST00000513917	DDX27	Q96GQ7	796 aa	Known RBP	12.54	□□□□□ -0.4
WDR41-223	ENST00000513917	LARP6	Q9BRS8	491 aa	Known RBP	12.54	□□□□□ -0.4
WDR41-223	ENST00000513917	KCNH8	Q96L42	1107 aa		12.53	□□□□□ -0.4
WDR41-223	ENST00000513917	ADGRD1	Q6QNK2	874 aa		12.5	□□□□□ -0.41
WDR41-223	ENST00000513917	ZNF454	Q8N9F8	522 aa		12.48	□□□□□ -0.41
WDR41-223	ENST00000513917	PSEN2	P49810	448 aa		12.47	□□□□□ -0.41
WDR41-223	ENST00000513917	TK2	O00142	265 aa		12.46	□□□□□ -0.41
WDR41-223	ENST00000513917	MFSD10	Q14728	455 aa		12.46	□□□□□ -0.41
WDR41-223	ENST00000513917	KCNK17	Q96T54	332 aa		12.46	□□□□□ -0.41
WDR41-223	ENST00000513917	AMER1	Q5JTC6	1135 aa	Predicted RBP	12.44	□□□□□ -0.42
WDR41-223	ENST00000513917	DMRTA1	Q5VZB9	504 aa		12.44	□□□□□ -0.42
WDR41-223	ENST00000513917	MAP3K9	P80192	1104 aa		12.43	□□□□□ -0.42
WDR41-223	ENST00000513917	BBX	Q8WY36	941 aa	Predicted RBP	12.43	□□□□□ -0.42
WDR41-223	ENST00000513917	EVI5	O60447	810 aa		12.42	□□□□□ -0.42
WDR41-223	ENST00000513917	STAC3	Q96MF2	364 aa		12.42	□□□□□ -0.42
WDR41-223	ENST00000513917	CADPS2	Q86UW7	1296 aa		12.4	□□□□□ -0.42
WDR41-223	ENST00000513917	JPH4	Q96JJ6	628 aa		12.4	□□□□□ -0.42
WDR41-223	ENST00000513917	FOSB	P53539	338 aa		12.39	□□□□□ -0.43
WDR41-223	ENST00000513917	BCL2L12	Q9HB09	334 aa		12.39	□□□□□ -0.43
WDR41-223	ENST00000513917	ANO8	Q9HCE9	1232 aa	Predicted RBP	12.38	□□□□□ -0.43
WDR41-223	ENST00000513917	PTPRE	P23469	700 aa		12.37	□□□□□ -0.43
WDR41-223	ENST00000513917	HR	O43593	1189 aa		12.36	□□□□□ -0.43
WDR41-223	ENST00000513917	EMILIN3	Q9NT22	766 aa		12.35	□□□□□ -0.43
WDR41-223	ENST00000513917	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	12.35	□□□□□ -0.43
WDR41-223	ENST00000513917	HCST	Q9UBK5	93 aa		12.35	□□□□□ -0.43
WDR41-223	ENST00000513917	ZDHHC16	Q969W1	377 aa		12.34	□□□□□ -0.43
WDR41-223	ENST00000513917	SPRYD3	Q8NCJ5	442 aa		12.32	□□□□□ -0.44
WDR41-223	ENST00000513917	VPS9D1	Q9Y2B5	631 aa		12.32	□□□□□ -0.44
WDR41-223	ENST00000513917	SLC4A5	Q9BY07	1137 aa		12.3	□□□□□ -0.44
WDR41-223	ENST00000513917	KCTD12	Q96CX2	325 aa	Known RBP	12.29	□□□□□ -0.44
WDR41-223	ENST00000513917	ADAM33	Q9BZ11	813 aa		12.29	□□□□□ -0.44
WDR41-223	ENST00000513917	RTN4	Q9NQC3	1192 aa	Known RBP	12.29	□□□□□ -0.44
WDR41-223	ENST00000513917	CAMK2B	Q13554	666 aa		12.26	□□□□□ -0.45
WDR41-223	ENST00000513917	ZBED2	Q9BTP6	218 aa		12.25	□□□□□ -0.45
WDR41-223	ENST00000513917	DPYSL4	O14531	572 aa		12.24	□□□□□ -0.45
WDR41-223	ENST00000513917	TYW1B	Q6NUM6	668 aa		12.24	□□□□□ -0.45
WDR41-223	ENST00000513917	FBXW7	Q969H0	707 aa		12.24	□□□□□ -0.45
WDR41-223	ENST00000513917	PCDHGA10	Q9Y5H3	936 aa		12.24	□□□□□ -0.45
WDR41-223	ENST00000513917	PHF14	O94880	888 aa		12.23	□□□□□ -0.45
WDR41-223	ENST00000513917	GOLGA8CP	A6NN73	597 aa		12.22	□□□□□ -0.45
WDR41-223	ENST00000513917	NBPF3	Q9H094	633 aa		12.22	□□□□□ -0.45
WDR41-223	ENST00000513917	PLA2G2E	Q9NZK7	142 aa		12.22	□□□□□ -0.45
WDR41-223	ENST00000513917	PPP1R3G	B7ZBB8	358 aa		12.21	□□□□□ -0.45
WDR41-223	ENST00000513917	MRPL50	Q8N5N7	158 aa	Known RBP	12.21	□□□□□ -0.45
WDR41-223	ENST00000513917	CFAP44	Q96MT7	982 aa		12.2	□□□□□ -0.46

Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms