RNA–Protein interactions for RNA: ENST00000512959.1

KIT-203, Transcript of KIT proto-oncogene receptor tyrosine kinase, humanhuman

TSL 4

Gene KIT, Length 746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIT-203ENST00000512959 PDE4AP27815 886 aa13.68□□□□□ -0.22
KIT-203ENST00000512959 KCNV2Q8TDN2 545 aa13.67□□□□□ -0.22
KIT-203ENST00000512959 L3MBTL3Q96JM7 780 aaPredicted RBP13.66□□□□□ -0.22
KIT-203ENST00000512959 TMEM121BQ9BXQ6 578 aaPredicted RBP13.66□□□□□ -0.22
KIT-203ENST00000512959 DDX27Q96GQ7 796 aaKnown RBP13.65□□□□□ -0.22
KIT-203ENST00000512959 MFSD10Q14728 455 aa13.64□□□□□ -0.23
KIT-203ENST00000512959 NBR1Q14596 966 aa13.63□□□□□ -0.23
KIT-203ENST00000512959 P3H3Q8IVL6 736 aa13.63□□□□□ -0.23
KIT-203ENST00000512959 TMC2Q8TDI7 906 aa13.61□□□□□ -0.23
KIT-203ENST00000512959 E2F4Q16254 413 aa13.6□□□□□ -0.23
KIT-203ENST00000512959 GPHNQ9NQX3 736 aaPredicted RBP13.6□□□□□ -0.23
KIT-203ENST00000512959 PPP1R15BQ5SWA1 713 aa13.59□□□□□ -0.23
KIT-203ENST00000512959 C2orf72A6NCS6 295 aa13.58□□□□□ -0.24
KIT-203ENST00000512959 DSG2Q14126 1118 aa13.57□□□□□ -0.24
KIT-203ENST00000512959 TMEM92Q6UXU6 159 aa13.57□□□□□ -0.24
KIT-203ENST00000512959 C3orf67Q6ZVT6 689 aa13.56□□□□□ -0.24
KIT-203ENST00000512959 POTEB2H3BUK9 544 aa13.55□□□□□ -0.24
KIT-203ENST00000512959 KIF3CO14782 793 aa13.53□□□□□ -0.24
KIT-203ENST00000512959 FOXK1P85037 733 aa13.5□□□□□ -0.25
KIT-203ENST00000512959 PLPP6Q8IY26 295 aa13.49□□□□□ -0.25
KIT-203ENST00000512959 CAMK2BQ13554 666 aa13.47□□□□□ -0.25
KIT-203ENST00000512959 ARHGEF1Q92888 912 aaKnown RBP13.47□□□□□ -0.25
KIT-203ENST00000512959 OTUD5Q96G74 571 aa13.47□□□□□ -0.25
KIT-203ENST00000512959 POTEJP0CG39 1038 aa13.46□□□□□ -0.25
KIT-203ENST00000512959 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.45□□□□□ -0.26
KIT-203ENST00000512959 EMILIN3Q9NT22 766 aa13.44□□□□□ -0.26
KIT-203ENST00000512959 DPYSL4O14531 572 aa13.4□□□□□ -0.26
KIT-203ENST00000512959 UPF1Q92900 1129 aaKnown RBP eCLIP13.39□□□□□ -0.27
KIT-203ENST00000512959 SEMA3EO15041 775 aa13.37□□□□□ -0.27
KIT-203ENST00000512959 ARIH1Q9Y4X5 557 aaPredicted RBP13.35□□□□□ -0.27
KIT-203ENST00000512959 PRKCSHP14314 528 aaPredicted RBP13.34□□□□□ -0.27
KIT-203ENST00000512959 TPRNQ4KMQ1 711 aa13.33□□□□□ -0.28
KIT-203ENST00000512959 SCUBE2Q9NQ36 999 aa13.31□□□□□ -0.28
KIT-203ENST00000512959 SLAIN1Q8ND83 568 aa13.3□□□□□ -0.28
KIT-203ENST00000512959 MAP3K9P80192 1104 aa13.29□□□□□ -0.28
KIT-203ENST00000512959 TESPA1A2RU30 521 aaPredicted RBP13.28□□□□□ -0.28
KIT-203ENST00000512959 OXER1Q8TDS5 423 aa13.28□□□□□ -0.28
KIT-203ENST00000512959 PDIA6Q15084 440 aa13.27□□□□□ -0.29
KIT-203ENST00000512959 MLLT3P42568 568 aaPredicted RBP13.26□□□□□ -0.29
KIT-203ENST00000512959 MAMSTRQ6ZN01 415 aa13.25□□□□□ -0.29
KIT-203ENST00000512959 LMOD2Q6P5Q4 547 aa13.24□□□□□ -0.29
KIT-203ENST00000512959 SPDYE16A6NNV3 312 aaPredicted RBP13.22□□□□□ -0.29
KIT-203ENST00000512959 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.22□□□□□ -0.29
KIT-203ENST00000512959 TULP1O00294 542 aaPredicted RBP13.21□□□□□ -0.29
KIT-203ENST00000512959 PTCD2Q8WV60 388 aaKnown RBP13.21□□□□□ -0.29
KIT-203ENST00000512959 EVI5O60447 810 aa13.18□□□□□ -0.3
KIT-203ENST00000512959 SLC34A2O95436 690 aa13.18□□□□□ -0.3
KIT-203ENST00000512959 PCDHGA4Q9Y5G9 962 aa13.17□□□□□ -0.3
KIT-203ENST00000512959 TBC1D12O60347 775 aa13.16□□□□□ -0.3
KIT-203ENST00000512959 GRXCR2A6NFK2 248 aa13.15□□□□□ -0.3
KIT-203ENST00000512959 HOXB3P14651 431 aaPredicted RBP13.15□□□□□ -0.3
KIT-203ENST00000512959 SMYD5Q6GMV2 418 aa13.15□□□□□ -0.3
KIT-203ENST00000512959 DOK7Q18PE1 504 aa13.14□□□□□ -0.31
KIT-203ENST00000512959 DDX12PQ92771 950 aa13.14□□□□□ -0.31
KIT-203ENST00000512959 ZNF316A6NFI3 1004 aaPredicted RBP13.13□□□□□ -0.31
KIT-203ENST00000512959 RBM26Q5T8P6 1007 aaKnown RBP13.13□□□□□ -0.31
KIT-203ENST00000512959 KHSRPQ92945 711 aaKnown RBP eCLIP13.13□□□□□ -0.31
KIT-203ENST00000512959 ARSIQ5FYB1 569 aa13.09□□□□□ -0.31
KIT-203ENST00000512959 POTEMA6NI47 508 aa13.08□□□□□ -0.32
KIT-203ENST00000512959 ZNF710Q8N1W2 664 aa13.08□□□□□ -0.32
KIT-203ENST00000512959 RIMBP2O15034 1052 aa13.07□□□□□ -0.32
KIT-203ENST00000512959 NUDT7P0C024 238 aa13.07□□□□□ -0.32
KIT-203ENST00000512959 POTEGQ6S5H5 508 aa13.06□□□□□ -0.32
KIT-203ENST00000512959 PTGER2P43116 358 aa13.05□□□□□ -0.32
KIT-203ENST00000512959 LCE2DQ5TA82 110 aaPredicted RBP13.05□□□□□ -0.32
KIT-203ENST00000512959 GPIHBP1Q8IV16 184 aa13.04□□□□□ -0.32
KIT-203ENST00000512959 ZC3H15Q8WU90 426 aaKnown RBP13.04□□□□□ -0.32
KIT-203ENST00000512959 OSBPP22059 807 aa13.03□□□□□ -0.32
KIT-203ENST00000512959 PRIM1P49642 420 aaKnown RBP13.03□□□□□ -0.32
KIT-203ENST00000512959 ANO8Q9HCE9 1232 aaPredicted RBP13.03□□□□□ -0.32
KIT-203ENST00000512959 GPR153Q6NV75 609 aa13.02□□□□□ -0.33
KIT-203ENST00000512959 KDM4FA0A1W2PPD8 638 aa13.01□□□□□ -0.33
KIT-203ENST00000512959 ZSWIM6Q9HCJ5 1215 aa13□□□□□ -0.33
KIT-203ENST00000512959 SNPHO15079 494 aa12.99□□□□□ -0.33
KIT-203ENST00000512959 FAM163AQ96GL9 167 aaPredicted RBP12.99□□□□□ -0.33
KIT-203ENST00000512959 PLSCR2Q9NRY7 297 aa12.99□□□□□ -0.33
KIT-203ENST00000512959 NUTM2FA1L443 756 aa12.98□□□□□ -0.33
KIT-203ENST00000512959 RBM33Q96EV2 1170 aaKnown RBP12.97□□□□□ -0.33
KIT-203ENST00000512959 PCDHGA10Q9Y5H3 936 aa12.97□□□□□ -0.33
KIT-203ENST00000512959 PHF14O94880 888 aa12.95□□□□□ -0.34
KIT-203ENST00000512959 ZNF454Q8N9F8 522 aa12.95□□□□□ -0.34
KIT-203ENST00000512959 JPH4Q96JJ6 628 aa12.95□□□□□ -0.34
KIT-203ENST00000512959 LHX6Q9UPM6 363 aa12.94□□□□□ -0.34
KIT-203ENST00000512959 GPR37O15354 613 aa12.93□□□□□ -0.34
KIT-203ENST00000512959 EN1Q05925 392 aaPredicted RBP12.93□□□□□ -0.34
KIT-203ENST00000512959 CDHR5Q9HBB8 845 aa12.93□□□□□ -0.34
KIT-203ENST00000512959 MAP3K7O43318 606 aa12.92□□□□□ -0.34
KIT-203ENST00000512959 FOSBP53539 338 aa12.92□□□□□ -0.34
KIT-203ENST00000512959 TYW1BQ6NUM6 668 aa12.92□□□□□ -0.34
KIT-203ENST00000512959 EPAS1Q99814 870 aa12.92□□□□□ -0.34
KIT-203ENST00000512959 HOXB1P14653 301 aaPredicted RBP12.91□□□□□ -0.34
KIT-203ENST00000512959 ZMYND10O75800 440 aa12.9□□□□□ -0.34
KIT-203ENST00000512959 TSR1Q2NL82 804 aaKnown RBP12.9□□□□□ -0.34
KIT-203ENST00000512959 SLC24A3Q9HC58 644 aa12.88□□□□□ -0.35
KIT-203ENST00000512959 FBXW7Q969H0 707 aa12.86□□□□□ -0.35
KIT-203ENST00000512959 ZDHHC16Q969W1 377 aa12.86□□□□□ -0.35
KIT-203ENST00000512959 ADAM33Q9BZ11 813 aa12.86□□□□□ -0.35
KIT-203ENST00000512959 BARGINQ6ZT62 677 aa12.85□□□□□ -0.35
KIT-203ENST00000512959 ST18O60284 1047 aa12.84□□□□□ -0.35
KIT-203ENST00000512959 FCHSD2O94868 740 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms