RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 DPY19L2Q6NUT2 758 aa9.13□□□□□ -0.95
HTT-210ENST00000512909 MICALL2Q8IY33 904 aa9.13□□□□□ -0.95
HTT-210ENST00000512909 SMYD5Q6GMV2 418 aa9.12□□□□□ -0.95
HTT-210ENST00000512909 NCKAP5LQ9HCH0 1330 aa9.11□□□□□ -0.95
HTT-210ENST00000512909 PRKCSHP14314 528 aaPredicted RBP9.11□□□□□ -0.95
HTT-210ENST00000512909 IRX5P78411 483 aaPredicted RBP9.11□□□□□ -0.95
HTT-210ENST00000512909 PPP1R15BQ5SWA1 713 aa9.11□□□□□ -0.95
HTT-210ENST00000512909 CRISPLD2Q9H0B8 497 aa9.11□□□□□ -0.95
HTT-210ENST00000512909 C7P10643 843 aa9.1□□□□□ -0.95
HTT-210ENST00000512909 ILDR1Q86SU0 546 aaPredicted RBP9.1□□□□□ -0.95
HTT-210ENST00000512909 GPHNQ9NQX3 736 aaPredicted RBP9.1□□□□□ -0.95
HTT-210ENST00000512909 MFSD10Q14728 455 aa9.09□□□□□ -0.95
HTT-210ENST00000512909 PDCD7Q8N8D1 485 aaKnown RBP9.09□□□□□ -0.95
HTT-210ENST00000512909 OTUD5Q96G74 571 aa9.09□□□□□ -0.95
HTT-210ENST00000512909 C3orf67Q6ZVT6 689 aa9.08□□□□□ -0.96
HTT-210ENST00000512909 POTEB2H3BUK9 544 aa9.05□□□□□ -0.96
HTT-210ENST00000512909 METRNQ9UJH8 293 aa9.05□□□□□ -0.96
HTT-210ENST00000512909 ZNF316A6NFI3 1004 aaPredicted RBP9.02□□□□□ -0.97
HTT-210ENST00000512909 LMOD2Q6P5Q4 547 aa9.02□□□□□ -0.97
HTT-210ENST00000512909 PLPP6Q8IY26 295 aa9.02□□□□□ -0.97
HTT-210ENST00000512909 MAP3K9P80192 1104 aa9.01□□□□□ -0.97
HTT-210ENST00000512909 DSG2Q14126 1118 aa9.01□□□□□ -0.97
HTT-210ENST00000512909 PELP1Q8IZL8 1130 aaKnown RBP9.01□□□□□ -0.97
HTT-210ENST00000512909 C2orf72A6NCS6 295 aa9□□□□□ -0.97
HTT-210ENST00000512909 FOXK1P85037 733 aa9□□□□□ -0.97
HTT-210ENST00000512909 POTEMA6NI47 508 aa8.99□□□□□ -0.97
HTT-210ENST00000512909 SEMA3EO15041 775 aa8.99□□□□□ -0.97
HTT-210ENST00000512909 CAMK2BQ13554 666 aa8.99□□□□□ -0.97
HTT-210ENST00000512909 TMEM121BQ9BXQ6 578 aaPredicted RBP8.99□□□□□ -0.97
HTT-210ENST00000512909 COLQQ9Y215 455 aaPredicted RBP8.99□□□□□ -0.97
HTT-210ENST00000512909 SPDYE16A6NNV3 312 aaPredicted RBP8.98□□□□□ -0.97
HTT-210ENST00000512909 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.98□□□□□ -0.97
HTT-210ENST00000512909 DPYSL4O14531 572 aa8.97□□□□□ -0.97
HTT-210ENST00000512909 TBC1D12O60347 775 aa8.97□□□□□ -0.97
HTT-210ENST00000512909 POTEGQ6S5H5 508 aa8.96□□□□□ -0.98
HTT-210ENST00000512909 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.96□□□□□ -0.98
HTT-210ENST00000512909 ARIH1Q9Y4X5 557 aaPredicted RBP8.96□□□□□ -0.98
HTT-210ENST00000512909 TESPA1A2RU30 521 aaPredicted RBP8.95□□□□□ -0.98
HTT-210ENST00000512909 MAMSTRQ6ZN01 415 aa8.95□□□□□ -0.98
HTT-210ENST00000512909 UPF1Q92900 1129 aaKnown RBP eCLIP8.95□□□□□ -0.98
HTT-210ENST00000512909 EMILIN3Q9NT22 766 aa8.9□□□□□ -0.98
HTT-210ENST00000512909 PCDH10Q9P2E7 1040 aa8.9□□□□□ -0.98
HTT-210ENST00000512909 KIF3CO14782 793 aa8.89□□□□□ -0.99
HTT-210ENST00000512909 GRXCR2A6NFK2 248 aa8.88□□□□□ -0.99
HTT-210ENST00000512909 PDIA6Q15084 440 aa8.88□□□□□ -0.99
HTT-210ENST00000512909 SCUBE2Q9NQ36 999 aa8.88□□□□□ -0.99
HTT-210ENST00000512909 POTEJP0CG39 1038 aa8.87□□□□□ -0.99
HTT-210ENST00000512909 GPIHBP1Q8IV16 184 aa8.87□□□□□ -0.99
HTT-210ENST00000512909 KRI1Q8N9T8 703 aaKnown RBP8.86□□□□□ -0.99
HTT-210ENST00000512909 POTEFA5A3E0 1075 aa8.85□□□□□ -0.99
HTT-210ENST00000512909 RIMBP2O15034 1052 aa8.84□□□□□ -0.99
HTT-210ENST00000512909 MLLT3P42568 568 aaPredicted RBP8.84□□□□□ -0.99
HTT-210ENST00000512909 TMEM92Q6UXU6 159 aa8.84□□□□□ -0.99
HTT-210ENST00000512909 ZC3H15Q8WU90 426 aaKnown RBP8.84□□□□□ -0.99
HTT-210ENST00000512909 NUTM2FA1L443 756 aa8.83□□□□□ -1
HTT-210ENST00000512909 EVI5O60447 810 aa8.83□□□□□ -1
HTT-210ENST00000512909 OXER1Q8TDS5 423 aa8.82□□□□□ -1
HTT-210ENST00000512909 RBM26Q5T8P6 1007 aaKnown RBP8.81□□□□□ -1
HTT-210ENST00000512909 DOK7Q18PE1 504 aa8.8□□□□□ -1
HTT-210ENST00000512909 ZNF710Q8N1W2 664 aa8.8□□□□□ -1
HTT-210ENST00000512909 DDX12PQ92771 950 aa8.8□□□□□ -1
HTT-210ENST00000512909 FAM163AQ96GL9 167 aaPredicted RBP8.8□□□□□ -1
HTT-210ENST00000512909 SLAIN1Q8ND83 568 aa8.79□□□□□ -1
HTT-210ENST00000512909 PTCD2Q8WV60 388 aaKnown RBP8.78□□□□□ -1
HTT-210ENST00000512909 SLC34A2O95436 690 aa8.77□□□□□ -1.01
HTT-210ENST00000512909 LCE2DQ5TA82 110 aaPredicted RBP8.77□□□□□ -1.01
HTT-210ENST00000512909 SLC24A3Q9HC58 644 aa8.75□□□□□ -1.01
HTT-210ENST00000512909 PCDHGA4Q9Y5G9 962 aa8.75□□□□□ -1.01
HTT-210ENST00000512909 SNPHO15079 494 aa8.74□□□□□ -1.01
HTT-210ENST00000512909 EPAS1Q99814 870 aa8.74□□□□□ -1.01
HTT-210ENST00000512909 MAP3K7O43318 606 aa8.73□□□□□ -1.01
HTT-210ENST00000512909 ZMYND10O75800 440 aa8.73□□□□□ -1.01
HTT-210ENST00000512909 FCHSD2O94868 740 aa8.73□□□□□ -1.01
HTT-210ENST00000512909 PTGER2P43116 358 aa8.73□□□□□ -1.01
HTT-210ENST00000512909 NEUROD2Q15784 382 aa8.73□□□□□ -1.01
HTT-210ENST00000512909 BARGINQ6ZT62 677 aa8.72□□□□□ -1.01
HTT-210ENST00000512909 AK7Q96M32 723 aa8.72□□□□□ -1.01
HTT-210ENST00000512909 PHF14O94880 888 aa8.71□□□□□ -1.02
HTT-210ENST00000512909 RBM33Q96EV2 1170 aaKnown RBP8.7□□□□□ -1.02
HTT-210ENST00000512909 OSBPP22059 807 aa8.69□□□□□ -1.02
HTT-210ENST00000512909 TYW1BQ6NUM6 668 aa8.69□□□□□ -1.02
HTT-210ENST00000512909 FBXW7Q969H0 707 aa8.69□□□□□ -1.02
HTT-210ENST00000512909 HIC1Q14526 733 aa8.68□□□□□ -1.02
HTT-210ENST00000512909 ZSWIM6Q9HCJ5 1215 aa8.68□□□□□ -1.02
HTT-210ENST00000512909 DAXXQ9UER7 740 aaPredicted RBP8.68□□□□□ -1.02
HTT-210ENST00000512909 GNPATO15228 680 aa8.67□□□□□ -1.02
HTT-210ENST00000512909 ZNF454Q8N9F8 522 aa8.67□□□□□ -1.02
HTT-210ENST00000512909 ANO8Q9HCE9 1232 aaPredicted RBP8.67□□□□□ -1.02
HTT-210ENST00000512909 NUDT7P0C024 238 aa8.66□□□□□ -1.02
HTT-210ENST00000512909 ARSIQ5FYB1 569 aa8.66□□□□□ -1.02
HTT-210ENST00000512909 MINK1Q8N4C8 1332 aaPredicted RBP8.65□□□□□ -1.02
HTT-210ENST00000512909 JPH4Q96JJ6 628 aa8.65□□□□□ -1.02
HTT-210ENST00000512909 PSDA5PKW4 1024 aaPredicted RBP8.64□□□□□ -1.03
HTT-210ENST00000512909 EN1Q05925 392 aaPredicted RBP8.64□□□□□ -1.03
HTT-210ENST00000512909 KCNH8Q96L42 1107 aa8.64□□□□□ -1.03
HTT-210ENST00000512909 MAP2K5Q13163 448 aa8.63□□□□□ -1.03
HTT-210ENST00000512909 ZDHHC16Q969W1 377 aa8.63□□□□□ -1.03
HTT-210ENST00000512909 TMEM132AQ24JP5 1023 aa8.62□□□□□ -1.03
HTT-210ENST00000512909 PPP4R3BQ5MIZ7 849 aa8.62□□□□□ -1.03
HTT-210ENST00000512909 CDAN1Q8IWY9 1227 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms