RNA–Protein interactions for RNA: ENST00000512726.1

RFC1-214, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-214ENST00000512726 GPHNQ9NQX3 736 aaPredicted RBP13.99□□□□□ -0.17
RFC1-214ENST00000512726 SUPT5HO00267 1087 aaKnown RBP13.98□□□□□ -0.17
RFC1-214ENST00000512726 SPDYE16A6NNV3 312 aaPredicted RBP13.97□□□□□ -0.17
RFC1-214ENST00000512726 GPBP1L1Q9HC44 474 aaPredicted RBP13.97□□□□□ -0.17
RFC1-214ENST00000512726 MS4A3Q96HJ5 214 aa13.93□□□□□ -0.18
RFC1-214ENST00000512726 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.93□□□□□ -0.181e-9■■■■■ 28.4
RFC1-214ENST00000512726 DPYSL4O14531 572 aa13.92□□□□□ -0.18
RFC1-214ENST00000512726 KDM4CQ9H3R0 1056 aa13.92□□□□□ -0.18
RFC1-214ENST00000512726 IL27Q8NEV9 243 aa13.91□□□□□ -0.18
RFC1-214ENST00000512726 TRPC6Q9Y210 931 aa13.91□□□□□ -0.18
RFC1-214ENST00000512726 PDIA6Q15084 440 aa13.9□□□□□ -0.18
RFC1-214ENST00000512726 ILDR1Q86SU0 546 aaPredicted RBP13.9□□□□□ -0.18
RFC1-214ENST00000512726 TRIM66O15016 1216 aa13.89□□□□□ -0.19
RFC1-214ENST00000512726 TIE1P35590 1138 aa13.89□□□□□ -0.19
RFC1-214ENST00000512726 PDE4DQ08499 809 aa13.89□□□□□ -0.19
RFC1-214ENST00000512726 EMILIN3Q9NT22 766 aa13.89□□□□□ -0.19
RFC1-214ENST00000512726 DSG2Q14126 1118 aa13.86□□□□□ -0.19
RFC1-214ENST00000512726 TTLL13PA6NNM8 815 aa13.85□□□□□ -0.19
RFC1-214ENST00000512726 TMC2Q8TDI7 906 aa13.85□□□□□ -0.19
RFC1-214ENST00000512726 FOXK1P85037 733 aa13.82□□□□□ -0.2
RFC1-214ENST00000512726 MICALL2Q8IY33 904 aa13.79□□□□□ -0.2
RFC1-214ENST00000512726 ZMYND15Q9H091 742 aa13.79□□□□□ -0.2
RFC1-214ENST00000512726 MINK1Q8N4C8 1332 aaPredicted RBP13.78□□□□□ -0.2
RFC1-214ENST00000512726 GPR37O15354 613 aa13.76□□□□□ -0.21
RFC1-214ENST00000512726 BMP2KQ9NSY1 1161 aaPredicted RBP13.76□□□□□ -0.21
RFC1-214ENST00000512726 TRIM35Q9UPQ4 493 aa13.76□□□□□ -0.21
RFC1-214ENST00000512726 DPY19L2Q6NUT2 758 aa13.75□□□□□ -0.21
RFC1-214ENST00000512726 C19orf67A6NJJ6 358 aa13.74□□□□□ -0.21
RFC1-214ENST00000512726 PLPP6Q8IY26 295 aa13.74□□□□□ -0.21
RFC1-214ENST00000512726 RSPH6AQ9H0K4 717 aa13.74□□□□□ -0.21
RFC1-214ENST00000512726 NUTM2FA1L443 756 aa13.73□□□□□ -0.21
RFC1-214ENST00000512726 GRXCR2A6NFK2 248 aa13.72□□□□□ -0.21
RFC1-214ENST00000512726 MAP3K9P80192 1104 aa13.72□□□□□ -0.21
RFC1-214ENST00000512726 MAP2K5Q13163 448 aa13.72□□□□□ -0.21
RFC1-214ENST00000512726 DDRGK1Q96HY6 314 aa13.71□□□□□ -0.21
RFC1-214ENST00000512726 FAM117AQ9C073 453 aa13.71□□□□□ -0.21
RFC1-214ENST00000512726 ZNF316A6NFI3 1004 aaPredicted RBP13.69□□□□□ -0.22
RFC1-214ENST00000512726 G3V3G9 751 aa13.68□□□□□ -0.22
RFC1-214ENST00000512726 CCDC102AQ96A19 550 aa13.68□□□□□ -0.22
RFC1-214ENST00000512726 IRF6O14896 467 aa13.67□□□□□ -0.22
RFC1-214ENST00000512726 C2orf72A6NCS6 295 aa13.66□□□□□ -0.22
RFC1-214ENST00000512726 AMHR2Q16671 573 aa13.66□□□□□ -0.22
RFC1-214ENST00000512726 POTEHQ6S545 545 aa13.66□□□□□ -0.22
RFC1-214ENST00000512726 PDCD7Q8N8D1 485 aaKnown RBP13.66□□□□□ -0.22
RFC1-214ENST00000512726 GNPATO15228 680 aa13.65□□□□□ -0.22
RFC1-214ENST00000512726 TMEM121BQ9BXQ6 578 aaPredicted RBP13.65□□□□□ -0.22
RFC1-214ENST00000512726 BOLA1Q9Y3E2 137 aa13.65□□□□□ -0.22
RFC1-214ENST00000512726 KIF3CO14782 793 aa13.63□□□□□ -0.23
RFC1-214ENST00000512726 FCHSD2O94868 740 aa13.63□□□□□ -0.23
RFC1-214ENST00000512726 HIC1Q14526 733 aa13.63□□□□□ -0.23
RFC1-214ENST00000512726 OSBPP22059 807 aa13.62□□□□□ -0.23
RFC1-214ENST00000512726 PLEKHG3A1L390 1219 aa13.61□□□□□ -0.23
RFC1-214ENST00000512726 PARP9Q8IXQ6 854 aa13.61□□□□□ -0.23
RFC1-214ENST00000512726 PTGER2P43116 358 aa13.6□□□□□ -0.23
RFC1-214ENST00000512726 OCEL1Q9H607 264 aa13.6□□□□□ -0.23
RFC1-214ENST00000512726 GALR2O43603 387 aaPredicted RBP13.59□□□□□ -0.23
RFC1-214ENST00000512726 UPF1Q92900 1129 aaKnown RBP eCLIP13.59□□□□□ -0.23
RFC1-214ENST00000512726 CLCN6P51797 869 aa13.57□□□□□ -0.24
RFC1-214ENST00000512726 IRX5P78411 483 aaPredicted RBP13.57□□□□□ -0.24
RFC1-214ENST00000512726 FLIIQ13045 1269 aa13.57□□□□□ -0.24
RFC1-214ENST00000512726 TBC1D12O60347 775 aa13.56□□□□□ -0.24
RFC1-214ENST00000512726 IER5LQ5T953 404 aa13.56□□□□□ -0.24
RFC1-214ENST00000512726 UBTFP17480 764 aaKnown RBP13.55□□□□□ -0.24
RFC1-214ENST00000512726 TTLL12Q14166 644 aaPredicted RBP13.55□□□□□ -0.24
RFC1-214ENST00000512726 OXER1Q8TDS5 423 aa13.55□□□□□ -0.24
RFC1-214ENST00000512726 DDX12PQ92771 950 aa13.55□□□□□ -0.24
RFC1-214ENST00000512726 ATN1P54259 1190 aaPredicted RBP13.54□□□□□ -0.24
RFC1-214ENST00000512726 GOPCQ9HD26 462 aa13.54□□□□□ -0.24
RFC1-214ENST00000512726 FECHP22830 423 aa13.52□□□□□ -0.25
RFC1-214ENST00000512726 L3MBTL3Q96JM7 780 aaPredicted RBP13.52□□□□□ -0.25
RFC1-214ENST00000512726 PLCG2P16885 1265 aa13.49□□□□□ -0.25
RFC1-214ENST00000512726 EVI5O60447 810 aa13.48□□□□□ -0.25
RFC1-214ENST00000512726 PTGDRQ13258 359 aa13.48□□□□□ -0.25
RFC1-214ENST00000512726 ATMINO43313 823 aaPredicted RBP13.47□□□□□ -0.25
RFC1-214ENST00000512726 GIGYF2Q6Y7W6 1299 aaKnown RBP13.46□□□□□ -0.25
RFC1-214ENST00000512726 PCMTD1Q96MG8 357 aaPredicted RBP13.46□□□□□ -0.25
RFC1-214ENST00000512726 ARID3AQ99856 593 aa13.45□□□□□ -0.26
RFC1-214ENST00000512726 ASTLQ6HA08 431 aaPredicted RBP13.44□□□□□ -0.26
RFC1-214ENST00000512726 PODXL2Q9NZ53 605 aa13.44□□□□□ -0.26
RFC1-214ENST00000512726 PRIM1P49642 420 aaKnown RBP13.42□□□□□ -0.26
RFC1-214ENST00000512726 TMEM92Q6UXU6 159 aa13.42□□□□□ -0.26
RFC1-214ENST00000512726 APBB1O00213 710 aa13.4□□□□□ -0.26
RFC1-214ENST00000512726 MS4A1P11836 297 aa13.4□□□□□ -0.26
RFC1-214ENST00000512726 C1orf115Q9H7X2 142 aa13.4□□□□□ -0.26
RFC1-214ENST00000512726 ONECUT3O60422 494 aaPredicted RBP13.38□□□□□ -0.27
RFC1-214ENST00000512726 ARID3CA6NKF2 412 aa13.37□□□□□ -0.27
RFC1-214ENST00000512726 CLCN1P35523 988 aa13.37□□□□□ -0.27
RFC1-214ENST00000512726 PTCD2Q8WV60 388 aaKnown RBP13.36□□□□□ -0.27
RFC1-214ENST00000512726 A6NJR5 290 aa13.35□□□□□ -0.27
RFC1-214ENST00000512726 HAX1O00165 279 aa13.35□□□□□ -0.27
RFC1-214ENST00000512726 SH3D19Q5HYK7 790 aa13.35□□□□□ -0.27
RFC1-214ENST00000512726 EPAS1Q99814 870 aa13.35□□□□□ -0.27
RFC1-214ENST00000512726 ANO8Q9HCE9 1232 aaPredicted RBP13.35□□□□□ -0.27
RFC1-214ENST00000512726 SEC24BO95487 1268 aa13.34□□□□□ -0.27
RFC1-214ENST00000512726 REPIN1Q9BWE0 567 aaKnown RBP13.34□□□□□ -0.27
RFC1-214ENST00000512726 EN1Q05925 392 aaPredicted RBP13.33□□□□□ -0.28
RFC1-214ENST00000512726 MAP3K7O43318 606 aa13.32□□□□□ -0.28
RFC1-214ENST00000512726 PHF14O94880 888 aa13.32□□□□□ -0.28
RFC1-214ENST00000512726 GPCPD1Q9NPB8 672 aa13.32□□□□□ -0.28
RFC1-214ENST00000512726 TMUB1Q9BVT8 246 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms