RNA–Protein interactions for RNA: ENST00000512189.1

LETM1-206, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 3

Gene LETM1, Length 320 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-206ENST00000512189 GLI2P10070 1586 aa23.36■■□□□ 1.33
LETM1-206ENST00000512189 PLCH2O75038 1416 aa23.36■■□□□ 1.33
LETM1-206ENST00000512189 DIP2BQ9P265 1576 aa23.35■■□□□ 1.33
LETM1-206ENST00000512189 CFDP1Q9UEE9 299 aaPredicted RBP23.34■■□□□ 1.33
LETM1-206ENST00000512189 ARHGAP5Q13017 1502 aa23.33■■□□□ 1.33
LETM1-206ENST00000512189 SAMD9LQ8IVG5 1584 aa23.32■■□□□ 1.32
LETM1-206ENST00000512189 FAM50AQ14320 339 aaKnown RBP23.32■■□□□ 1.32
LETM1-206ENST00000512189 DNMT1P26358 1616 aaKnown RBP23.3■■□□□ 1.32
LETM1-206ENST00000512189 MAP3K4Q9Y6R4 1608 aa23.29■■□□□ 1.32
LETM1-206ENST00000512189 ZNF644Q9H582 1327 aaPredicted RBP23.27■■□□□ 1.32
LETM1-206ENST00000512189 PLEKHH2Q8IVE3 1493 aa23.26■■□□□ 1.31
LETM1-206ENST00000512189 ABCC1P33527 1531 aa23.25■■□□□ 1.31
LETM1-206ENST00000512189 ARHGEF5Q12774 1597 aa23.25■■□□□ 1.31
LETM1-206ENST00000512189 CD109Q6YHK3 1445 aa23.25■■□□□ 1.31
LETM1-206ENST00000512189 DAPK1P53355 1430 aa23.24■■□□□ 1.31
LETM1-206ENST00000512189 PTPRKQ15262 1439 aa23.24■■□□□ 1.31
LETM1-206ENST00000512189 KIAA1107Q9UPP5 1409 aa23.23■■□□□ 1.31
LETM1-206ENST00000512189 FANCAO15360 1455 aa23.23■■□□□ 1.31
LETM1-206ENST00000512189 MBD5Q9P267 1494 aa23.23■■□□□ 1.31
LETM1-206ENST00000512189 CFAP74Q9C0B2 1584 aa23.23■■□□□ 1.31
LETM1-206ENST00000512189 CROCC2H7BZ55 1655 aa23.22■■□□□ 1.31
LETM1-206ENST00000512189 ABCC5O15440 1437 aa23.22■■□□□ 1.31
LETM1-206ENST00000512189 SYCP2Q9BX26 1530 aa23.22■■□□□ 1.31
LETM1-206ENST00000512189 EFCAB2Q5VUJ9 269 aa23.21■■□□□ 1.31
LETM1-206ENST00000512189 ZNF777Q9ULD5 760 aaPredicted RBP23.21■■□□□ 1.31
LETM1-206ENST00000512189 SHANK2Q9UPX8 1470 aa23.2■■□□□ 1.3
LETM1-206ENST00000512189 ARHGEF12Q9NZN5 1544 aa23.18■■□□□ 1.3
LETM1-206ENST00000512189 CCDC141Q6ZP82 1450 aa23.17■■□□□ 1.3
LETM1-206ENST00000512189 AKNAQ7Z591 1439 aa23.17■■□□□ 1.3
LETM1-206ENST00000512189 ITGAEP38570 1179 aa23.17■■□□□ 1.3
LETM1-206ENST00000512189 KIF13AQ9H1H9 1805 aa23.17■■□□□ 1.3
LETM1-206ENST00000512189 NEO1Q92859 1461 aa23.16■■□□□ 1.3
LETM1-206ENST00000512189 FAM69CQ0P6D2 419 aa23.14■■□□□ 1.29
LETM1-206ENST00000512189 PPRC1Q5VV67 1664 aaKnown RBP23.13■■□□□ 1.29
LETM1-206ENST00000512189 ADGRL1O94910 1474 aa23.13■■□□□ 1.29
LETM1-206ENST00000512189 ADGRL2O95490 1459 aa23.13■■□□□ 1.29
LETM1-206ENST00000512189 MAST1Q9Y2H9 1570 aa23.12■■□□□ 1.29
LETM1-206ENST00000512189 ROCK1Q13464 1354 aa23.12■■□□□ 1.29
LETM1-206ENST00000512189 HFM1A2PYH4 1435 aa23.11■■□□□ 1.29
LETM1-206ENST00000512189 ADGBQ8N7X0 1667 aa23.11■■□□□ 1.29
LETM1-206ENST00000512189 C9orf84Q5VXU9 1444 aa23.09■■□□□ 1.29
LETM1-206ENST00000512189 HNRNPMP52272 730 aaKnown RBP eCLIP23.09■■□□□ 1.29
LETM1-206ENST00000512189 RSPH4AQ5TD94 716 aa23.09■■□□□ 1.29
LETM1-206ENST00000512189 GCC2Q8IWJ2 1684 aa23.09■■□□□ 1.29
LETM1-206ENST00000512189 TRAPPC8Q9Y2L5 1435 aa23.08■■□□□ 1.29
LETM1-206ENST00000512189 TEX14Q8IWB6 1497 aa23.08■■□□□ 1.29
LETM1-206ENST00000512189 NAIPQ13075 1403 aa23.06■■□□□ 1.28
LETM1-206ENST00000512189 SCAPERQ9BY12 1400 aa23.06■■□□□ 1.28
LETM1-206ENST00000512189 SETD5Q9C0A6 1442 aa23.05■■□□□ 1.28
LETM1-206ENST00000512189 POGZQ7Z3K3 1410 aa23.04■■□□□ 1.28
LETM1-206ENST00000512189 PLXNC1O60486 1568 aa23.03■■□□□ 1.28
LETM1-206ENST00000512189 KDM5CP41229 1560 aa23.02■■□□□ 1.28
LETM1-206ENST00000512189 NCOA1Q15788 1441 aa23.02■■□□□ 1.28
LETM1-206ENST00000512189 ZNF518AQ6AHZ1 1483 aa23.02■■□□□ 1.28
LETM1-206ENST00000512189 ZFYVE16Q7Z3T8 1539 aa23.02■■□□□ 1.28
LETM1-206ENST00000512189 INO80Q9ULG1 1556 aaPredicted RBP23.01■■□□□ 1.27
LETM1-206ENST00000512189 CHIC2Q9UKJ5 165 aa23.01■■□□□ 1.27
LETM1-206ENST00000512189 ANKRD30AQ9BXX3 1397 aa23.01■■□□□ 1.27
LETM1-206ENST00000512189 RAB3GAP2Q9H2M9 1393 aa23■■□□□ 1.27
LETM1-206ENST00000512189 TSPY4P0CV99 314 aa22.99■■□□□ 1.27
LETM1-206ENST00000512189 TSPY10P0CW01 314 aa22.99■■□□□ 1.27
LETM1-206ENST00000512189 RTEL1-TNFRSF6BF6WH68 1400 aa22.99■■□□□ 1.27
LETM1-206ENST00000512189 TSPOAP1O95153 1857 aa22.98■■□□□ 1.27
LETM1-206ENST00000512189 DENND4BO75064 1496 aaPredicted RBP22.98■■□□□ 1.27
LETM1-206ENST00000512189 ATP7AQ04656 1500 aa22.96■■□□□ 1.27
LETM1-206ENST00000512189 FRMPD1Q5SYB0 1578 aa22.96■■□□□ 1.27
LETM1-206ENST00000512189 RICTORQ6R327 1708 aa22.95■■□□□ 1.26
LETM1-206ENST00000512189 RRP7BPQ9NSQ0 103 aa22.95■■□□□ 1.26
LETM1-206ENST00000512189 KIF15Q9NS87 1388 aa22.93■■□□□ 1.26
LETM1-206ENST00000512189 HRCP23327 699 aa22.93■■□□□ 1.26
LETM1-206ENST00000512189 AFAP1Q8N556 730 aa22.93■■□□□ 1.26
LETM1-206ENST00000512189 KDM6BO15054 1643 aa22.93■■□□□ 1.26
LETM1-206ENST00000512189 HECW2Q9P2P5 1572 aa22.93■■□□□ 1.26
LETM1-206ENST00000512189 SPAG9O60271 1321 aaKnown RBP22.92■■□□□ 1.26
LETM1-206ENST00000512189 ZMYM4Q5VZL5 1548 aa22.92■■□□□ 1.26
LETM1-206ENST00000512189 MLH3Q9UHC1 1453 aa22.92■■□□□ 1.26
LETM1-206ENST00000512189 KIDINS220Q9ULH0 1771 aa22.89■■□□□ 1.26
LETM1-206ENST00000512189 DUOX2Q9NRD8 1548 aa22.89■■□□□ 1.26
LETM1-206ENST00000512189 ANKRD50Q9ULJ7 1429 aa22.88■■□□□ 1.25
LETM1-206ENST00000512189 ERBINQ96RT1 1412 aa22.85■■□□□ 1.25
LETM1-206ENST00000512189 COL17A1Q9UMD9 1497 aaPredicted RBP22.83■■□□□ 1.25
LETM1-206ENST00000512189 ABCA6Q8N139 1617 aa22.82■■□□□ 1.24
LETM1-206ENST00000512189 DHX57Q6P158 1386 aaKnown RBP22.82■■□□□ 1.24
LETM1-206ENST00000512189 RAPGEF3O95398 923 aa22.82■■□□□ 1.24
LETM1-206ENST00000512189 TRHP20396 242 aaPredicted RBP22.82■■□□□ 1.24
LETM1-206ENST00000512189 ACIN1Q9UKV3 1341 aaKnown RBP22.81■■□□□ 1.24
LETM1-206ENST00000512189 DIP2CQ9Y2E4 1556 aa22.8■■□□□ 1.24
LETM1-206ENST00000512189 MAGI2Q86UL8 1455 aa22.8■■□□□ 1.24
LETM1-206ENST00000512189 KDM5DQ9BY66 1539 aa22.78■■□□□ 1.24
LETM1-206ENST00000512189 UNC13BO14795 1591 aa22.78■■□□□ 1.24
LETM1-206ENST00000512189 EIF2AK4Q9P2K8 1649 aaKnown RBP22.78■■□□□ 1.24
LETM1-206ENST00000512189 DHX29Q7Z478 1369 aaKnown RBP22.76■■□□□ 1.23
LETM1-206ENST00000512189 YEATS2Q9ULM3 1422 aa22.75■■□□□ 1.23
LETM1-206ENST00000512189 A2MP01023 1474 aa22.75■■□□□ 1.23
LETM1-206ENST00000512189 ARHGEF40Q8TER5 1519 aa22.74■■□□□ 1.23
LETM1-206ENST00000512189 REREQ9P2R6 1566 aa22.72■■□□□ 1.23
LETM1-206ENST00000512189 BCORL1Q5H9F3 1711 aa22.72■■□□□ 1.23
LETM1-206ENST00000512189 DEPDC5O75140 1603 aa22.71■■□□□ 1.23
LETM1-206ENST00000512189 CCER1Q8TC90 406 aaPredicted RBP22.71■■□□□ 1.23
LETM1-206ENST00000512189 MYT1LQ9UL68 1186 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms