RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 BBXQ8WY36 941 aaPredicted RBP8.39□□□□□ -1.07
TRAPPC11-207ENST00000511409 STK25O00506 426 aa8.38□□□□□ -1.07
TRAPPC11-207ENST00000511409 HS6ST3Q8IZP7 471 aa8.38□□□□□ -1.07
TRAPPC11-207ENST00000511409 EFCAB3Q8N7B9 438 aa8.38□□□□□ -1.07
TRAPPC11-207ENST00000511409 G3V3G9 751 aa8.37□□□□□ -1.07
TRAPPC11-207ENST00000511409 HOXB1P14653 301 aaPredicted RBP8.37□□□□□ -1.07
TRAPPC11-207ENST00000511409 HAP1P54257 671 aaPredicted RBP8.37□□□□□ -1.07
TRAPPC11-207ENST00000511409 DPY19L2Q6NUT2 758 aa8.37□□□□□ -1.07
TRAPPC11-207ENST00000511409 STK24Q9Y6E0 443 aa8.36□□□□□ -1.07
TRAPPC11-207ENST00000511409 DOK7Q18PE1 504 aa8.35□□□□□ -1.07
TRAPPC11-207ENST00000511409 CFAP44Q96MT7 982 aa8.35□□□□□ -1.07
TRAPPC11-207ENST00000511409 PAXIP1Q6ZW49 1069 aaPredicted RBP8.34□□□□□ -1.07
TRAPPC11-207ENST00000511409 NLRP6P59044 892 aa8.31□□□□□ -1.08
TRAPPC11-207ENST00000511409 FBXO22Q8NEZ5 403 aa8.31□□□□□ -1.08
TRAPPC11-207ENST00000511409 ZNF710Q8N1W2 664 aa8.3□□□□□ -1.08
TRAPPC11-207ENST00000511409 MFRPQ9BY79 579 aa8.3□□□□□ -1.08
TRAPPC11-207ENST00000511409 ZSWIM6Q9HCJ5 1215 aa8.3□□□□□ -1.08
TRAPPC11-207ENST00000511409 RIMBP2O15034 1052 aa8.29□□□□□ -1.08
TRAPPC11-207ENST00000511409 SPRYD3Q8NCJ5 442 aa8.29□□□□□ -1.08
TRAPPC11-207ENST00000511409 MS4A4AQ96JQ5 239 aa8.29□□□□□ -1.08
TRAPPC11-207ENST00000511409 PHF8Q9UPP1 1060 aa8.29□□□□□ -1.08
TRAPPC11-207ENST00000511409 ERBB3P21860 1342 aa8.27□□□□□ -1.09
TRAPPC11-207ENST00000511409 MICALL2Q8IY33 904 aa8.25□□□□□ -1.09
TRAPPC11-207ENST00000511409 RYDENQ9NUL5 291 aaKnown RBP8.24□□□□□ -1.09
TRAPPC11-207ENST00000511409 NKX1-1Q15270 411 aaPredicted RBP8.23□□□□□ -1.09
TRAPPC11-207ENST00000511409 RNF166Q96A37 237 aaPredicted RBP8.23□□□□□ -1.09
TRAPPC11-207ENST00000511409 PTGER2P43116 358 aa8.22□□□□□ -1.09
TRAPPC11-207ENST00000511409 TMEM92Q6UXU6 159 aa8.22□□□□□ -1.09
TRAPPC11-207ENST00000511409 VARS2Q5ST30 1063 aaKnown RBP8.21□□□□□ -1.1
TRAPPC11-207ENST00000511409 ZNF687Q8N1G0 1237 aa8.21□□□□□ -1.1
TRAPPC11-207ENST00000511409 GPR153Q6NV75 609 aa8.19□□□□□ -1.1
TRAPPC11-207ENST00000511409 VSIG10Q8N0Z9 540 aa8.18□□□□□ -1.1
TRAPPC11-207ENST00000511409 MYT1LQ9UL68 1186 aa8.17□□□□□ -1.1
TRAPPC11-207ENST00000511409 GTPBP6O43824 516 aaPredicted RBP8.16□□□□□ -1.1
TRAPPC11-207ENST00000511409 TSHZ2Q9NRE2 1034 aa8.16□□□□□ -1.1
TRAPPC11-207ENST00000511409 PPP1R37O75864 691 aa8.14□□□□□ -1.11
TRAPPC11-207ENST00000511409 KIF3CO14782 793 aa8.1□□□□□ -1.11
TRAPPC11-207ENST00000511409 KDM2AQ9Y2K7 1162 aa8.1□□□□□ -1.11
TRAPPC11-207ENST00000511409 ZNF316A6NFI3 1004 aaPredicted RBP8.09□□□□□ -1.11
TRAPPC11-207ENST00000511409 ARSIQ5FYB1 569 aa8.07□□□□□ -1.12
TRAPPC11-207ENST00000511409 PBX2P40425 430 aa8.06□□□□□ -1.12
TRAPPC11-207ENST00000511409 LSM11P83369 360 aaKnown RBP eCLIP8.05□□□□□ -1.12
TRAPPC11-207ENST00000511409 C2orf72A6NCS6 295 aa8.02□□□□□ -1.13
TRAPPC11-207ENST00000511409 SLC34A2O95436 690 aa8.02□□□□□ -1.13
TRAPPC11-207ENST00000511409 GPHNQ9NQX3 736 aaPredicted RBP8.02□□□□□ -1.13
TRAPPC11-207ENST00000511409 TMC2Q8TDI7 906 aa8.01□□□□□ -1.13
TRAPPC11-207ENST00000511409 CRISPLD2Q9H0B8 497 aa8.01□□□□□ -1.13
TRAPPC11-207ENST00000511409 FOXK1P85037 733 aa8□□□□□ -1.13
TRAPPC11-207ENST00000511409 ANKRD13DQ6ZTN6 518 aa8□□□□□ -1.13
TRAPPC11-207ENST00000511409 KHSRPQ92945 711 aaKnown RBP eCLIP8□□□□□ -1.13
TRAPPC11-207ENST00000511409 BCANQ96GW7 911 aa8□□□□□ -1.13
TRAPPC11-207ENST00000511409 PDE4AP27815 886 aa7.98□□□□□ -1.13
TRAPPC11-207ENST00000511409 NUDT7P0C024 238 aa7.96□□□□□ -1.14
TRAPPC11-207ENST00000511409 POTEEQ6S8J3 1075 aa7.96□□□□□ -1.14
TRAPPC11-207ENST00000511409 NCKAP5LQ9HCH0 1330 aa7.96□□□□□ -1.14
TRAPPC11-207ENST00000511409 MFSD10Q14728 455 aa7.95□□□□□ -1.14
TRAPPC11-207ENST00000511409 PCDHGA4Q9Y5G9 962 aa7.95□□□□□ -1.14
TRAPPC11-207ENST00000511409 PSDA5PKW4 1024 aaPredicted RBP7.94□□□□□ -1.14
TRAPPC11-207ENST00000511409 DSG2Q14126 1118 aa7.94□□□□□ -1.14
TRAPPC11-207ENST00000511409 LHX6Q9UPM6 363 aa7.94□□□□□ -1.14
TRAPPC11-207ENST00000511409 CADPS2Q86UW7 1296 aa7.92□□□□□ -1.14
TRAPPC11-207ENST00000511409 PLPP6Q8IY26 295 aa7.92□□□□□ -1.14
TRAPPC11-207ENST00000511409 WDR70Q9NW82 654 aa7.92□□□□□ -1.14
TRAPPC11-207ENST00000511409 HCSTQ9UBK5 93 aa7.92□□□□□ -1.14
TRAPPC11-207ENST00000511409 PTCD2Q8WV60 388 aaKnown RBP7.91□□□□□ -1.14
TRAPPC11-207ENST00000511409 KDM4FA0A1W2PPD8 638 aa7.9□□□□□ -1.14
TRAPPC11-207ENST00000511409 NBR1Q14596 966 aa7.9□□□□□ -1.14
TRAPPC11-207ENST00000511409 PPP1R15BQ5SWA1 713 aa7.9□□□□□ -1.14
TRAPPC11-207ENST00000511409 ADGRD1Q6QNK2 874 aa7.9□□□□□ -1.14
TRAPPC11-207ENST00000511409 TK2O00142 265 aa7.89□□□□□ -1.15
TRAPPC11-207ENST00000511409 DDX27Q96GQ7 796 aaKnown RBP7.89□□□□□ -1.15
TRAPPC11-207ENST00000511409 LARP6Q9BRS8 491 aaKnown RBP7.89□□□□□ -1.15
TRAPPC11-207ENST00000511409 PLA2G2EQ9NZK7 142 aa7.89□□□□□ -1.15
TRAPPC11-207ENST00000511409 ARHGAP33O14559 1287 aa7.88□□□□□ -1.15
TRAPPC11-207ENST00000511409 AXIN2Q9Y2T1 843 aa7.87□□□□□ -1.15
TRAPPC11-207ENST00000511409 OXER1Q8TDS5 423 aa7.86□□□□□ -1.15
TRAPPC11-207ENST00000511409 HRO43593 1189 aa7.85□□□□□ -1.15
TRAPPC11-207ENST00000511409 CAMK2BQ13554 666 aa7.85□□□□□ -1.15
TRAPPC11-207ENST00000511409 TBC1D12O60347 775 aa7.84□□□□□ -1.15
TRAPPC11-207ENST00000511409 P3H3Q8IVL6 736 aa7.83□□□□□ -1.16
TRAPPC11-207ENST00000511409 PPP4R3BQ5MIZ7 849 aa7.8□□□□□ -1.16
TRAPPC11-207ENST00000511409 ANO8Q9HCE9 1232 aaPredicted RBP7.8□□□□□ -1.16
TRAPPC11-207ENST00000511409 ARIH1Q9Y4X5 557 aaPredicted RBP7.8□□□□□ -1.16
TRAPPC11-207ENST00000511409 DMRTA1Q5VZB9 504 aa7.79□□□□□ -1.16
TRAPPC11-207ENST00000511409 EMILIN3Q9NT22 766 aa7.79□□□□□ -1.16
TRAPPC11-207ENST00000511409 KCNV2Q8TDN2 545 aa7.78□□□□□ -1.16
TRAPPC11-207ENST00000511409 PSEN2P49810 448 aa7.76□□□□□ -1.17
TRAPPC11-207ENST00000511409 E2F4Q16254 413 aa7.76□□□□□ -1.17
TRAPPC11-207ENST00000511409 IFFO2Q5TF58 517 aa7.76□□□□□ -1.17
TRAPPC11-207ENST00000511409 RGS20O76081 388 aa7.75□□□□□ -1.17
TRAPPC11-207ENST00000511409 PRKCSHP14314 528 aaPredicted RBP7.75□□□□□ -1.17
TRAPPC11-207ENST00000511409 TPRNQ4KMQ1 711 aa7.75□□□□□ -1.17
TRAPPC11-207ENST00000511409 UPF1Q92900 1129 aaKnown RBP eCLIP7.75□□□□□ -1.17
TRAPPC11-207ENST00000511409 MAP3K9P80192 1104 aa7.74□□□□□ -1.17
TRAPPC11-207ENST00000511409 KCNH8Q96L42 1107 aa7.74□□□□□ -1.17
TRAPPC11-207ENST00000511409 SLC4A5Q9BY07 1137 aa7.74□□□□□ -1.17
TRAPPC11-207ENST00000511409 EVI5O60447 810 aa7.73□□□□□ -1.17
TRAPPC11-207ENST00000511409 KCTD12Q96CX2 325 aaKnown RBP7.73□□□□□ -1.17
TRAPPC11-207ENST00000511409 VPS9D1Q9Y2B5 631 aa7.71□□□□□ -1.18
TRAPPC11-207ENST00000511409 SPDYE16A6NNV3 312 aaPredicted RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms