RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 SPDYE16A6NNV3 312 aaPredicted RBP11.04□□□□□ -0.64
HMGB1P47-201ENST00000511281 CLCN6P51797 869 aa11.03□□□□□ -0.64
HMGB1P47-201ENST00000511281 POTEHQ6S545 545 aa11.03□□□□□ -0.64
HMGB1P47-201ENST00000511281 PDIA6Q15084 440 aa11.02□□□□□ -0.65
HMGB1P47-201ENST00000511281 EMILIN3Q9NT22 766 aa11.01□□□□□ -0.65
HMGB1P47-201ENST00000511281 MLLT3P42568 568 aaPredicted RBP11□□□□□ -0.65
HMGB1P47-201ENST00000511281 FOXK1P85037 733 aa11□□□□□ -0.65
HMGB1P47-201ENST00000511281 TRIM35Q9UPQ4 493 aa11□□□□□ -0.65
HMGB1P47-201ENST00000511281 GPIHBP1Q8IV16 184 aa10.99□□□□□ -0.65
HMGB1P47-201ENST00000511281 MICALL2Q8IY33 904 aa10.99□□□□□ -0.65
HMGB1P47-201ENST00000511281 DSG2Q14126 1118 aa10.98□□□□□ -0.65
HMGB1P47-201ENST00000511281 RBM26Q5T8P6 1007 aaKnown RBP10.98□□□□□ -0.65
HMGB1P47-201ENST00000511281 PDCD7Q8N8D1 485 aaKnown RBP10.98□□□□□ -0.65
HMGB1P47-201ENST00000511281 AK7Q96M32 723 aa10.98□□□□□ -0.65
HMGB1P47-201ENST00000511281 TMEM121BQ9BXQ6 578 aaPredicted RBP10.98□□□□□ -0.65
HMGB1P47-201ENST00000511281 DAXXQ9UER7 740 aaPredicted RBP10.97□□□□□ -0.65
HMGB1P47-201ENST00000511281 DPYSL4O14531 572 aa10.96□□□□□ -0.65
HMGB1P47-201ENST00000511281 KIF3CO14782 793 aa10.94□□□□□ -0.66
HMGB1P47-201ENST00000511281 GALR2O43603 387 aaPredicted RBP10.94□□□□□ -0.66
HMGB1P47-201ENST00000511281 DPY19L2Q6NUT2 758 aa10.94□□□□□ -0.66
HMGB1P47-201ENST00000511281 C14orf37Q86TY3 774 aa10.94□□□□□ -0.66
HMGB1P47-201ENST00000511281 IRX5P78411 483 aaPredicted RBP10.93□□□□□ -0.66
HMGB1P47-201ENST00000511281 IER5LQ5T953 404 aa10.93□□□□□ -0.66
HMGB1P47-201ENST00000511281 TMC2Q8TDI7 906 aa10.93□□□□□ -0.66
HMGB1P47-201ENST00000511281 GPR37O15354 613 aa10.91□□□□□ -0.66
HMGB1P47-201ENST00000511281 ARXQ96QS3 562 aa10.91□□□□□ -0.66
HMGB1P47-201ENST00000511281 ASTLQ6HA08 431 aaPredicted RBP10.89□□□□□ -0.67
HMGB1P47-201ENST00000511281 OCEL1Q9H607 264 aa10.89□□□□□ -0.67
HMGB1P47-201ENST00000511281 PLPP6Q8IY26 295 aa10.88□□□□□ -0.67
HMGB1P47-201ENST00000511281 BOLA1Q9Y3E2 137 aa10.88□□□□□ -0.67
HMGB1P47-201ENST00000511281 TRIM66O15016 1216 aa10.87□□□□□ -0.67
HMGB1P47-201ENST00000511281 ATN1P54259 1190 aaPredicted RBP10.87□□□□□ -0.67
HMGB1P47-201ENST00000511281 C2orf72A6NCS6 295 aa10.86□□□□□ -0.67
HMGB1P47-201ENST00000511281 ATMINO43313 823 aaPredicted RBP10.86□□□□□ -0.67
HMGB1P47-201ENST00000511281 KRI1Q8N9T8 703 aaKnown RBP10.86□□□□□ -0.67
HMGB1P47-201ENST00000511281 PTGER2P43116 358 aa10.83□□□□□ -0.68
HMGB1P47-201ENST00000511281 PDE4DQ08499 809 aa10.83□□□□□ -0.68
HMGB1P47-201ENST00000511281 KDM4CQ9H3R0 1056 aa10.83□□□□□ -0.68
HMGB1P47-201ENST00000511281 GPBP1L1Q9HC44 474 aaPredicted RBP10.83□□□□□ -0.68
HMGB1P47-201ENST00000511281 MINK1Q8N4C8 1332 aaPredicted RBP10.81□□□□□ -0.68
HMGB1P47-201ENST00000511281 OXER1Q8TDS5 423 aa10.8□□□□□ -0.68
HMGB1P47-201ENST00000511281 L3MBTL3Q96JM7 780 aaPredicted RBP10.79□□□□□ -0.68
HMGB1P47-201ENST00000511281 OSBPP22059 807 aa10.78□□□□□ -0.68
HMGB1P47-201ENST00000511281 MAP3K9P80192 1104 aa10.78□□□□□ -0.68
HMGB1P47-201ENST00000511281 MAP2K5Q13163 448 aa10.78□□□□□ -0.68
HMGB1P47-201ENST00000511281 G3V3G9 751 aa10.77□□□□□ -0.69
HMGB1P47-201ENST00000511281 EVX2Q03828 476 aa10.76□□□□□ -0.69
HMGB1P47-201ENST00000511281 AMHR2Q16671 573 aa10.76□□□□□ -0.69
HMGB1P47-201ENST00000511281 PLCG2P16885 1265 aa10.75□□□□□ -0.69
HMGB1P47-201ENST00000511281 TMEM92Q6UXU6 159 aa10.75□□□□□ -0.69
HMGB1P47-201ENST00000511281 HAX1O00165 279 aa10.74□□□□□ -0.69
HMGB1P47-201ENST00000511281 HIC1Q14526 733 aa10.74□□□□□ -0.69
HMGB1P47-201ENST00000511281 GRXCR2A6NFK2 248 aa10.73□□□□□ -0.69
HMGB1P47-201ENST00000511281 IRF6O14896 467 aa10.73□□□□□ -0.69
HMGB1P47-201ENST00000511281 GNPATO15228 680 aa10.73□□□□□ -0.69
HMGB1P47-201ENST00000511281 IL27Q8NEV9 243 aa10.72□□□□□ -0.69
HMGB1P47-201ENST00000511281 CCDC102AQ96A19 550 aa10.72□□□□□ -0.69
HMGB1P47-201ENST00000511281 NUTM2FA1L443 756 aa10.7□□□□□ -0.7
HMGB1P47-201ENST00000511281 TBC1D12O60347 775 aa10.7□□□□□ -0.7
HMGB1P47-201ENST00000511281 FCHSD2O94868 740 aa10.7□□□□□ -0.7
HMGB1P47-201ENST00000511281 DDRGK1Q96HY6 314 aa10.69□□□□□ -0.7
HMGB1P47-201ENST00000511281 PTCD2Q8WV60 388 aaKnown RBP10.68□□□□□ -0.7
HMGB1P47-201ENST00000511281 UPF1Q92900 1129 aaKnown RBP eCLIP10.68□□□□□ -0.7
HMGB1P47-201ENST00000511281 SLC34A2O95436 690 aa10.67□□□□□ -0.7
HMGB1P47-201ENST00000511281 HOMEZQ8IX15 550 aa10.67□□□□□ -0.7
HMGB1P47-201ENST00000511281 FAM117AQ9C073 453 aa10.67□□□□□ -0.7
HMGB1P47-201ENST00000511281 ANO8Q9HCE9 1232 aaPredicted RBP10.67□□□□□ -0.7
HMGB1P47-201ENST00000511281 EVI5O60447 810 aa10.66□□□□□ -0.7
HMGB1P47-201ENST00000511281 PARP9Q8IXQ6 854 aa10.66□□□□□ -0.7
HMGB1P47-201ENST00000511281 PLEKHG3A1L390 1219 aa10.65□□□□□ -0.7
HMGB1P47-201ENST00000511281 PRIM1P49642 420 aaKnown RBP10.65□□□□□ -0.7
HMGB1P47-201ENST00000511281 PTGDRQ13258 359 aa10.65□□□□□ -0.7
HMGB1P47-201ENST00000511281 GOPCQ9HD26 462 aa10.65□□□□□ -0.7
HMGB1P47-201ENST00000511281 DDX12PQ92771 950 aa10.64□□□□□ -0.71
HMGB1P47-201ENST00000511281 COLQQ9Y215 455 aaPredicted RBP10.64□□□□□ -0.71
HMGB1P47-201ENST00000511281 FECHP22830 423 aa10.62□□□□□ -0.71
HMGB1P47-201ENST00000511281 PELP1Q8IZL8 1130 aaKnown RBP10.62□□□□□ -0.71
HMGB1P47-201ENST00000511281 SLC39A7Q92504 469 aa10.62□□□□□ -0.71
HMGB1P47-201ENST00000511281 ZNF316A6NFI3 1004 aaPredicted RBP10.61□□□□□ -0.71
HMGB1P47-201ENST00000511281 GABBR2O75899 941 aa10.61□□□□□ -0.71
HMGB1P47-201ENST00000511281 SEC24BO95487 1268 aa10.61□□□□□ -0.71
HMGB1P47-201ENST00000511281 POTEFA5A3E0 1075 aa10.6□□□□□ -0.71
HMGB1P47-201ENST00000511281 ZMYND15Q9H091 742 aa10.6□□□□□ -0.71
HMGB1P47-201ENST00000511281 C7P10643 843 aa10.59□□□□□ -0.71
HMGB1P47-201ENST00000511281 PHF14O94880 888 aa10.58□□□□□ -0.72
HMGB1P47-201ENST00000511281 EPAS1Q99814 870 aa10.58□□□□□ -0.72
HMGB1P47-201ENST00000511281 SUPT5HO00267 1087 aaKnown RBP10.57□□□□□ -0.72
HMGB1P47-201ENST00000511281 EN1Q05925 392 aaPredicted RBP10.57□□□□□ -0.72
HMGB1P47-201ENST00000511281 TMUB1Q9BVT8 246 aa10.56□□□□□ -0.72
HMGB1P47-201ENST00000511281 NPDC1Q9NQX5 325 aaPredicted RBP10.56□□□□□ -0.72
HMGB1P47-201ENST00000511281 DCBLD2Q96PD2 775 aa10.55□□□□□ -0.72
HMGB1P47-201ENST00000511281 RSPH6AQ9H0K4 717 aa10.55□□□□□ -0.72
HMGB1P47-201ENST00000511281 TTLL12Q14166 644 aaPredicted RBP10.53□□□□□ -0.72
HMGB1P47-201ENST00000511281 GIGYF2Q6Y7W6 1299 aaKnown RBP10.53□□□□□ -0.72
HMGB1P47-201ENST00000511281 C3orf67Q6ZVT6 689 aa10.53□□□□□ -0.72
HMGB1P47-201ENST00000511281 KDM4FA0A1W2PPD8 638 aa10.51□□□□□ -0.73
HMGB1P47-201ENST00000511281 FLIIQ13045 1269 aa10.51□□□□□ -0.73
HMGB1P47-201ENST00000511281 ONECUT3O60422 494 aaPredicted RBP10.5□□□□□ -0.73
HMGB1P47-201ENST00000511281 MS4A1P11836 297 aa10.5□□□□□ -0.73
HMGB1P47-201ENST00000511281 CDHR5Q9HBB8 845 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms