RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 UHRF1BP1LA0JNW5 1464 aa8.5□□□□□ -1.05
PROM1-211ENST00000511153 EPRSP07814 1512 aaKnown RBP8.49□□□□□ -1.05
PROM1-211ENST00000511153 ASXL2Q76L83 1435 aa8.49□□□□□ -1.05
PROM1-211ENST00000511153 KANK4Q5T7N3 995 aaPredicted RBP8.48□□□□□ -1.05
PROM1-211ENST00000511153 FYCO1Q9BQS8 1478 aa8.48□□□□□ -1.05
PROM1-211ENST00000511153 KDM5BQ9UGL1 1544 aa8.48□□□□□ -1.05
PROM1-211ENST00000511153 TSPOAP1O95153 1857 aa8.48□□□□□ -1.05
PROM1-211ENST00000511153 FAM69CQ0P6D2 419 aa8.48□□□□□ -1.05
PROM1-211ENST00000511153 MAGI3Q5TCQ9 1506 aa8.47□□□□□ -1.05
PROM1-211ENST00000511153 PLEKHD1A6NEE1 506 aa8.47□□□□□ -1.05
PROM1-211ENST00000511153 SPDYE4A6NLX3 237 aa8.46□□□□□ -1.06
PROM1-211ENST00000511153 KIF14Q15058 1648 aa8.45□□□□□ -1.06
PROM1-211ENST00000511153 MTUS2Q5JR59 1369 aa8.44□□□□□ -1.06
PROM1-211ENST00000511153 WDR7Q9Y4E6 1490 aa8.44□□□□□ -1.06
PROM1-211ENST00000511153 CFAP43Q8NDM7 1665 aa8.44□□□□□ -1.06
PROM1-211ENST00000511153 TIAM1Q13009 1591 aa8.43□□□□□ -1.06
PROM1-211ENST00000511153 CCDC18Q5T9S5 1454 aa8.43□□□□□ -1.06
PROM1-211ENST00000511153 ZBTB12Q9Y330 459 aaPredicted RBP8.43□□□□□ -1.06
PROM1-211ENST00000511153 KIF13AQ9H1H9 1805 aa8.43□□□□□ -1.06
PROM1-211ENST00000511153 MAPKBP1O60336 1514 aa8.42□□□□□ -1.06
PROM1-211ENST00000511153 CDK11AQ9UQ88 783 aaPredicted RBP8.42□□□□□ -1.06
PROM1-211ENST00000511153 DIP2BQ9P265 1576 aa8.41□□□□□ -1.06
PROM1-211ENST00000511153 ZNF777Q9ULD5 760 aaPredicted RBP8.41□□□□□ -1.06
PROM1-211ENST00000511153 TROQ12816 1431 aaPredicted RBP8.41□□□□□ -1.06
PROM1-211ENST00000511153 TTC37Q6PGP7 1564 aa8.41□□□□□ -1.06
PROM1-211ENST00000511153 ABCC10Q5T3U5 1492 aa8.4□□□□□ -1.07
PROM1-211ENST00000511153 LRRC9Q6ZRR7 1453 aa8.4□□□□□ -1.07
PROM1-211ENST00000511153 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.39□□□□□ -1.07
PROM1-211ENST00000511153 CD109Q6YHK3 1445 aa8.38□□□□□ -1.07
PROM1-211ENST00000511153 EHBP1L1Q8N3D4 1523 aa8.38□□□□□ -1.07
PROM1-211ENST00000511153 SUPT6HQ7KZ85 1726 aaKnown RBP8.36□□□□□ -1.07
PROM1-211ENST00000511153 CCNB3Q8WWL7 1395 aa8.36□□□□□ -1.07
PROM1-211ENST00000511153 NCOA2Q15596 1464 aa8.36□□□□□ -1.07
PROM1-211ENST00000511153 ZNF644Q9H582 1327 aaPredicted RBP8.36□□□□□ -1.07
PROM1-211ENST00000511153 CDC42BPAQ5VT25 1732 aa8.35□□□□□ -1.07
PROM1-211ENST00000511153 ARHGAP5Q13017 1502 aa8.35□□□□□ -1.07
PROM1-211ENST00000511153 PPRC1Q5VV67 1664 aaKnown RBP8.35□□□□□ -1.07
PROM1-211ENST00000511153 PHLDB1Q86UU1 1377 aa8.35□□□□□ -1.07
PROM1-211ENST00000511153 MYO5CQ9NQX4 1742 aa8.35□□□□□ -1.07
PROM1-211ENST00000511153 SLC24A1O60721 1099 aa8.35□□□□□ -1.07
PROM1-211ENST00000511153 ITGAEP38570 1179 aa8.35□□□□□ -1.07
PROM1-211ENST00000511153 ABCA9Q8IUA7 1624 aa8.35□□□□□ -1.07
PROM1-211ENST00000511153 MAP3K4Q9Y6R4 1608 aa8.35□□□□□ -1.07
PROM1-211ENST00000511153 CFDP1Q9UEE9 299 aaPredicted RBP8.34□□□□□ -1.07
PROM1-211ENST00000511153 CDC42BPBQ9Y5S2 1711 aa8.33□□□□□ -1.08
PROM1-211ENST00000511153 MAP3K1Q13233 1512 aa8.33□□□□□ -1.08
PROM1-211ENST00000511153 FAM50AQ14320 339 aaKnown RBP8.33□□□□□ -1.08
PROM1-211ENST00000511153 ZNF692Q9BU19 519 aaPredicted RBP8.33□□□□□ -1.08
PROM1-211ENST00000511153 GLI2P10070 1586 aa8.33□□□□□ -1.08
PROM1-211ENST00000511153 GPATCH8Q9UKJ3 1502 aaKnown RBP8.32□□□□□ -1.08
PROM1-211ENST00000511153 RAPGEF3O95398 923 aa8.32□□□□□ -1.08
PROM1-211ENST00000511153 HNRNPMP52272 730 aaKnown RBP eCLIP8.32□□□□□ -1.08
PROM1-211ENST00000511153 MYT1LQ9UL68 1186 aa8.32□□□□□ -1.08
PROM1-211ENST00000511153 PREX2Q70Z35 1606 aa8.31□□□□□ -1.08
PROM1-211ENST00000511153 FANCAO15360 1455 aa8.31□□□□□ -1.08
PROM1-211ENST00000511153 PROM2Q8N271 834 aa8.31□□□□□ -1.08
PROM1-211ENST00000511153 PLCH2O75038 1416 aa8.3□□□□□ -1.08
PROM1-211ENST00000511153 EFCAB2Q5VUJ9 269 aa8.3□□□□□ -1.08
PROM1-211ENST00000511153 AKNAQ7Z591 1439 aa8.29□□□□□ -1.08
PROM1-211ENST00000511153 SAMD9LQ8IVG5 1584 aa8.29□□□□□ -1.08
PROM1-211ENST00000511153 ITSN2Q9NZM3 1697 aa8.29□□□□□ -1.08
PROM1-211ENST00000511153 MYOM3Q5VTT5 1437 aa8.29□□□□□ -1.08
PROM1-211ENST00000511153 COL17A1Q9UMD9 1497 aaPredicted RBP8.29□□□□□ -1.08
PROM1-211ENST00000511153 SYCP2Q9BX26 1530 aa8.28□□□□□ -1.08
PROM1-211ENST00000511153 ARHGEF12Q9NZN5 1544 aa8.28□□□□□ -1.08
PROM1-211ENST00000511153 AFAP1Q8N556 730 aa8.28□□□□□ -1.08
PROM1-211ENST00000511153 CHIC2Q9UKJ5 165 aa8.28□□□□□ -1.08
PROM1-211ENST00000511153 SCAPERQ9BY12 1400 aa8.28□□□□□ -1.08
PROM1-211ENST00000511153 ADGRL1O94910 1474 aa8.28□□□□□ -1.08
PROM1-211ENST00000511153 CAMSAP2Q08AD1 1489 aa8.28□□□□□ -1.08
PROM1-211ENST00000511153 PTPN23Q9H3S7 1636 aa8.28□□□□□ -1.08
PROM1-211ENST00000511153 SPDYE2BA6NHP3 402 aa8.27□□□□□ -1.09
PROM1-211ENST00000511153 SPDYE6P0CI01 402 aa8.27□□□□□ -1.09
PROM1-211ENST00000511153 SPDYE2Q495Y8 402 aa8.27□□□□□ -1.09
PROM1-211ENST00000511153 FGD6Q6ZV73 1430 aa8.27□□□□□ -1.09
PROM1-211ENST00000511153 TRAPPC8Q9Y2L5 1435 aa8.27□□□□□ -1.09
PROM1-211ENST00000511153 TEX14Q8IWB6 1497 aa8.27□□□□□ -1.09
PROM1-211ENST00000511153 SSUH2Q9Y2M2 353 aa8.27□□□□□ -1.09
PROM1-211ENST00000511153 KDM6BO15054 1643 aa8.26□□□□□ -1.09
PROM1-211ENST00000511153 ABCC1P33527 1531 aa8.25□□□□□ -1.09
PROM1-211ENST00000511153 CFAP74Q9C0B2 1584 aa8.24□□□□□ -1.09
PROM1-211ENST00000511153 DENND4BO75064 1496 aaPredicted RBP8.24□□□□□ -1.09
PROM1-211ENST00000511153 NEO1Q92859 1461 aa8.24□□□□□ -1.09
PROM1-211ENST00000511153 FRMPD1Q5SYB0 1578 aa8.23□□□□□ -1.09
PROM1-211ENST00000511153 RICTORQ6R327 1708 aa8.22□□□□□ -1.09
PROM1-211ENST00000511153 RRP7BPQ9NSQ0 103 aa8.22□□□□□ -1.09
PROM1-211ENST00000511153 POGZQ7Z3K3 1410 aa8.21□□□□□ -1.09
PROM1-211ENST00000511153 YEATS2Q9ULM3 1422 aa8.21□□□□□ -1.09
PROM1-211ENST00000511153 SPAG9O60271 1321 aaKnown RBP8.21□□□□□ -1.1
PROM1-211ENST00000511153 ARAP3Q8WWN8 1544 aa8.21□□□□□ -1.1
PROM1-211ENST00000511153 MBD5Q9P267 1494 aa8.21□□□□□ -1.1
PROM1-211ENST00000511153 PTPRKQ15262 1439 aa8.21□□□□□ -1.1
PROM1-211ENST00000511153 MIA2Q96PC5 1412 aa8.21□□□□□ -1.1
PROM1-211ENST00000511153 MLECQ14165 292 aa8.2□□□□□ -1.1
PROM1-211ENST00000511153 ABCC5O15440 1437 aa8.2□□□□□ -1.1
PROM1-211ENST00000511153 DAPK1P53355 1430 aa8.2□□□□□ -1.1
PROM1-211ENST00000511153 TCOF1Q13428 1488 aaKnown RBP8.19□□□□□ -1.1
PROM1-211ENST00000511153 CCDC141Q6ZP82 1450 aa8.19□□□□□ -1.1
PROM1-211ENST00000511153 TSPY4P0CV99 314 aa8.19□□□□□ -1.1
PROM1-211ENST00000511153 TSPY10P0CW01 314 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms