RNA–Protein interactions for RNA: ENST00000510997.1

CALCOCO2-218, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 674 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-218ENST00000510997 CADPS2Q86UW7 1296 aa12.42□□□□□ -0.42
CALCOCO2-218ENST00000510997 TSHZ2Q9NRE2 1034 aa12.41□□□□□ -0.42
CALCOCO2-218ENST00000510997 KIF3CO14782 793 aa12.39□□□□□ -0.43
CALCOCO2-218ENST00000510997 SLAIN1Q8ND83 568 aa12.39□□□□□ -0.43
CALCOCO2-218ENST00000510997 CRISPLD2Q9H0B8 497 aa12.38□□□□□ -0.43
CALCOCO2-218ENST00000510997 NCKAP5LQ9HCH0 1330 aa12.37□□□□□ -0.43
CALCOCO2-218ENST00000510997 GPHNQ9NQX3 736 aaPredicted RBP12.36□□□□□ -0.43
CALCOCO2-218ENST00000510997 C2orf72A6NCS6 295 aa12.35□□□□□ -0.43
CALCOCO2-218ENST00000510997 PDE4AP27815 886 aa12.34□□□□□ -0.43
CALCOCO2-218ENST00000510997 TMC2Q8TDI7 906 aa12.34□□□□□ -0.43
CALCOCO2-218ENST00000510997 HAP1P54257 671 aaPredicted RBP12.32□□□□□ -0.44
CALCOCO2-218ENST00000510997 FOXK1P85037 733 aa12.29□□□□□ -0.44
CALCOCO2-218ENST00000510997 MFSD10Q14728 455 aa12.29□□□□□ -0.44
CALCOCO2-218ENST00000510997 LARP6Q9BRS8 491 aaKnown RBP12.28□□□□□ -0.44
CALCOCO2-218ENST00000510997 DSG2Q14126 1118 aa12.27□□□□□ -0.45
CALCOCO2-218ENST00000510997 DDX27Q96GQ7 796 aaKnown RBP12.24□□□□□ -0.45
CALCOCO2-218ENST00000510997 PPP1R15BQ5SWA1 713 aa12.23□□□□□ -0.45
CALCOCO2-218ENST00000510997 PLPP6Q8IY26 295 aa12.23□□□□□ -0.45
CALCOCO2-218ENST00000510997 HOXB3P14651 431 aaPredicted RBP12.22□□□□□ -0.45
CALCOCO2-218ENST00000510997 SNPHO15079 494 aa12.21□□□□□ -0.45
CALCOCO2-218ENST00000510997 VSIG10Q8N0Z9 540 aa12.19□□□□□ -0.46
CALCOCO2-218ENST00000510997 KDM2AQ9Y2K7 1162 aa12.19□□□□□ -0.46
CALCOCO2-218ENST00000510997 SLC34A2O95436 690 aa12.17□□□□□ -0.46
CALCOCO2-218ENST00000510997 DOK7Q18PE1 504 aa12.16□□□□□ -0.46
CALCOCO2-218ENST00000510997 WDR70Q9NW82 654 aa12.16□□□□□ -0.46
CALCOCO2-218ENST00000510997 CAMK2BQ13554 666 aa12.15□□□□□ -0.46
CALCOCO2-218ENST00000510997 PTCD2Q8WV60 388 aaKnown RBP12.11□□□□□ -0.47
CALCOCO2-218ENST00000510997 ZSWIM6Q9HCJ5 1215 aa12.11□□□□□ -0.47
CALCOCO2-218ENST00000510997 E2F4Q16254 413 aa12.1□□□□□ -0.47
CALCOCO2-218ENST00000510997 RIMBP2O15034 1052 aa12.09□□□□□ -0.47
CALCOCO2-218ENST00000510997 OXER1Q8TDS5 423 aa12.09□□□□□ -0.47
CALCOCO2-218ENST00000510997 EMILIN3Q9NT22 766 aa12.09□□□□□ -0.47
CALCOCO2-218ENST00000510997 ZNF710Q8N1W2 664 aa12.08□□□□□ -0.48
CALCOCO2-218ENST00000510997 ST18O60284 1047 aa12.07□□□□□ -0.48
CALCOCO2-218ENST00000510997 LCE2DQ5TA82 110 aaPredicted RBP12.07□□□□□ -0.48
CALCOCO2-218ENST00000510997 GPR153Q6NV75 609 aa12.07□□□□□ -0.48
CALCOCO2-218ENST00000510997 FAM163AQ96GL9 167 aaPredicted RBP12.07□□□□□ -0.48
CALCOCO2-218ENST00000510997 PCDHGA4Q9Y5G9 962 aa12.06□□□□□ -0.48
CALCOCO2-218ENST00000510997 HOXB1P14653 301 aaPredicted RBP12.04□□□□□ -0.48
CALCOCO2-218ENST00000510997 ARIH1Q9Y4X5 557 aaPredicted RBP12.04□□□□□ -0.48
CALCOCO2-218ENST00000510997 ARSIQ5FYB1 569 aa12.03□□□□□ -0.48
CALCOCO2-218ENST00000510997 UPF1Q92900 1129 aaKnown RBP eCLIP12.03□□□□□ -0.489e-9■■■■■ 36.6
CALCOCO2-218ENST00000510997 TBC1D12O60347 775 aa12.02□□□□□ -0.49
CALCOCO2-218ENST00000510997 KDM4FA0A1W2PPD8 638 aa12.01□□□□□ -0.49
CALCOCO2-218ENST00000510997 KCNV2Q8TDN2 545 aa12.01□□□□□ -0.49
CALCOCO2-218ENST00000510997 KHSRPQ92945 711 aaKnown RBP eCLIP11.99□□□□□ -0.49
CALCOCO2-218ENST00000510997 NISCHQ9Y2I1 1504 aa11.98□□□□□ -0.49
CALCOCO2-218ENST00000510997 DPYSL4O14531 572 aa11.98□□□□□ -0.49
CALCOCO2-218ENST00000510997 MAP3K9P80192 1104 aa11.98□□□□□ -0.49
CALCOCO2-218ENST00000510997 P3H3Q8IVL6 736 aa11.98□□□□□ -0.49
CALCOCO2-218ENST00000510997 ARHGEF1Q92888 912 aaKnown RBP11.98□□□□□ -0.49
CALCOCO2-218ENST00000510997 NUDT7P0C024 238 aa11.95□□□□□ -0.5
CALCOCO2-218ENST00000510997 ANO8Q9HCE9 1232 aaPredicted RBP11.95□□□□□ -0.5
CALCOCO2-218ENST00000510997 EVI5O60447 810 aa11.93□□□□□ -0.5
CALCOCO2-218ENST00000510997 MARVELD3Q96A59 401 aa11.92□□□□□ -0.5
CALCOCO2-218ENST00000510997 PDIA6Q15084 440 aa11.91□□□□□ -0.5
CALCOCO2-218ENST00000510997 SPDYE16A6NNV3 312 aaPredicted RBP11.9□□□□□ -0.5
CALCOCO2-218ENST00000510997 EMP3P54852 163 aa11.9□□□□□ -0.5
CALCOCO2-218ENST00000510997 ZNF316A6NFI3 1004 aaPredicted RBP11.88□□□□□ -0.51
CALCOCO2-218ENST00000510997 LHX6Q9UPM6 363 aa11.88□□□□□ -0.51
CALCOCO2-218ENST00000510997 PTGER2P43116 358 aa11.86□□□□□ -0.51
CALCOCO2-218ENST00000510997 ERBB3P21860 1342 aa11.85□□□□□ -0.51
CALCOCO2-218ENST00000510997 POTEB3A0JP26 581 aa11.83□□□□□ -0.52
CALCOCO2-218ENST00000510997 FAM205CA6NFA0 338 aa11.83□□□□□ -0.52
CALCOCO2-218ENST00000510997 POTEBQ6S5H4 581 aa11.83□□□□□ -0.52
CALCOCO2-218ENST00000510997 PSDA5PKW4 1024 aaPredicted RBP11.82□□□□□ -0.52
CALCOCO2-218ENST00000510997 POTEMA6NI47 508 aa11.82□□□□□ -0.52
CALCOCO2-218ENST00000510997 POTEGQ6S5H5 508 aa11.82□□□□□ -0.52
CALCOCO2-218ENST00000510997 HS3ST6Q96QI5 342 aa11.81□□□□□ -0.52
CALCOCO2-218ENST00000510997 FOSBP53539 338 aa11.8□□□□□ -0.52
CALCOCO2-218ENST00000510997 VARS2Q5ST30 1063 aaKnown RBP11.8□□□□□ -0.52
CALCOCO2-218ENST00000510997 JPH4Q96JJ6 628 aa11.8□□□□□ -0.52
CALCOCO2-218ENST00000510997 BCANQ96GW7 911 aa11.78□□□□□ -0.52
CALCOCO2-218ENST00000510997 SEMA3EO15041 775 aa11.77□□□□□ -0.53
CALCOCO2-218ENST00000510997 PHF14O94880 888 aa11.77□□□□□ -0.53
CALCOCO2-218ENST00000510997 PCDHGA10Q9Y5H3 936 aa11.77□□□□□ -0.53
CALCOCO2-218ENST00000510997 ZNF454Q8N9F8 522 aa11.76□□□□□ -0.53
CALCOCO2-218ENST00000510997 DDX12PQ92771 950 aa11.76□□□□□ -0.53
CALCOCO2-218ENST00000510997 PPP4R3BQ5MIZ7 849 aa11.75□□□□□ -0.53
CALCOCO2-218ENST00000510997 ZNF687Q8N1G0 1237 aa11.75□□□□□ -0.53
CALCOCO2-218ENST00000510997 TESPA1A2RU30 521 aaPredicted RBP11.74□□□□□ -0.53
CALCOCO2-218ENST00000510997 PRKCSHP14314 528 aaPredicted RBP11.74□□□□□ -0.53
CALCOCO2-218ENST00000510997 MLLT3P42568 568 aaPredicted RBP11.74□□□□□ -0.53
CALCOCO2-218ENST00000510997 EPAS1Q99814 870 aa11.73□□□□□ -0.53
CALCOCO2-218ENST00000510997 GRXCR2A6NFK2 248 aa11.72□□□□□ -0.53
CALCOCO2-218ENST00000510997 TYW1BQ6NUM6 668 aa11.72□□□□□ -0.53
CALCOCO2-218ENST00000510997 ZDHHC16Q969W1 377 aa11.72□□□□□ -0.53
CALCOCO2-218ENST00000510997 FBXW7Q969H0 707 aa11.71□□□□□ -0.53
CALCOCO2-218ENST00000510997 OSBPP22059 807 aa11.7□□□□□ -0.54
CALCOCO2-218ENST00000510997 NBR1Q14596 966 aa11.69□□□□□ -0.54
CALCOCO2-218ENST00000510997 ADAM33Q9BZ11 813 aa11.69□□□□□ -0.54
CALCOCO2-218ENST00000510997 BCL2L12Q9HB09 334 aa11.69□□□□□ -0.54
CALCOCO2-218ENST00000510997 PRIM1P49642 420 aaKnown RBP11.68□□□□□ -0.54
CALCOCO2-218ENST00000510997 POTEEQ6S8J3 1075 aa11.68□□□□□ -0.54
CALCOCO2-218ENST00000510997 CDAN1Q8IWY9 1227 aa11.67□□□□□ -0.54
CALCOCO2-218ENST00000510997 PBX2P40425 430 aa11.66□□□□□ -0.54
CALCOCO2-218ENST00000510997 EN1Q05925 392 aaPredicted RBP11.66□□□□□ -0.54
CALCOCO2-218ENST00000510997 SMYD5Q6GMV2 418 aa11.64□□□□□ -0.55
CALCOCO2-218ENST00000510997 ARHGAP33O14559 1287 aa11.63□□□□□ -0.55
CALCOCO2-218ENST00000510997 PCDH10Q9P2E7 1040 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms