RNA–Protein interactions for RNA: ENST00000510948.1

SMAD1-208, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-208ENST00000510948 EVX2Q03828 476 aa8.64□□□□□ -1.03
SMAD1-208ENST00000510948 ZMYND10O75800 440 aa8.63□□□□□ -1.03
SMAD1-208ENST00000510948 DPY19L2Q6NUT2 758 aa8.63□□□□□ -1.03
SMAD1-208ENST00000510948 SLC24A3Q9HC58 644 aa8.63□□□□□ -1.03
SMAD1-208ENST00000510948 BRPF1P55201 1214 aaPredicted RBP8.62□□□□□ -1.03
SMAD1-208ENST00000510948 ERICH6Q7L0X2 663 aa8.6□□□□□ -1.03
SMAD1-208ENST00000510948 MICALL2Q8IY33 904 aa8.6□□□□□ -1.03
SMAD1-208ENST00000510948 MLLT3P42568 568 aaPredicted RBP8.59□□□□□ -1.03
SMAD1-208ENST00000510948 DSG2Q14126 1118 aa8.59□□□□□ -1.03
SMAD1-208ENST00000510948 BARGINQ6ZT62 677 aa8.58□□□□□ -1.04
SMAD1-208ENST00000510948 TMC2Q8TDI7 906 aa8.58□□□□□ -1.04
SMAD1-208ENST00000510948 EMILIN3Q9NT22 766 aa8.58□□□□□ -1.04
SMAD1-208ENST00000510948 TIMELESSQ9UNS1 1208 aa8.58□□□□□ -1.04
SMAD1-208ENST00000510948 SPDYE16A6NNV3 312 aaPredicted RBP8.57□□□□□ -1.04
SMAD1-208ENST00000510948 DPYSL4O14531 572 aa8.57□□□□□ -1.04
SMAD1-208ENST00000510948 ATN1P54259 1190 aaPredicted RBP8.57□□□□□ -1.04
SMAD1-208ENST00000510948 FOXK1P85037 733 aa8.57□□□□□ -1.04
SMAD1-208ENST00000510948 NEUROD2Q15784 382 aa8.57□□□□□ -1.04
SMAD1-208ENST00000510948 RBM26Q5T8P6 1007 aaKnown RBP8.57□□□□□ -1.04
SMAD1-208ENST00000510948 PDCD7Q8N8D1 485 aaKnown RBP8.57□□□□□ -1.04
SMAD1-208ENST00000510948 IRX5P78411 483 aaPredicted RBP8.56□□□□□ -1.04
SMAD1-208ENST00000510948 TMEM121BQ9BXQ6 578 aaPredicted RBP8.56□□□□□ -1.04
SMAD1-208ENST00000510948 OCEL1Q9H607 264 aa8.56□□□□□ -1.04
SMAD1-208ENST00000510948 ATMINO43313 823 aaPredicted RBP8.55□□□□□ -1.04
SMAD1-208ENST00000510948 BOLA1Q9Y3E2 137 aa8.55□□□□□ -1.04
SMAD1-208ENST00000510948 PDIA6Q15084 440 aa8.54□□□□□ -1.04
SMAD1-208ENST00000510948 IER5LQ5T953 404 aa8.54□□□□□ -1.04
SMAD1-208ENST00000510948 ASTLQ6HA08 431 aaPredicted RBP8.54□□□□□ -1.04
SMAD1-208ENST00000510948 G3V3G9 751 aa8.53□□□□□ -1.04
SMAD1-208ENST00000510948 GPIHBP1Q8IV16 184 aa8.53□□□□□ -1.04
SMAD1-208ENST00000510948 PLPP6Q8IY26 295 aa8.52□□□□□ -1.05
SMAD1-208ENST00000510948 AK7Q96M32 723 aa8.52□□□□□ -1.05
SMAD1-208ENST00000510948 C2orf72A6NCS6 295 aa8.51□□□□□ -1.05
SMAD1-208ENST00000510948 KIF3CO14782 793 aa8.51□□□□□ -1.05
SMAD1-208ENST00000510948 KRI1Q8N9T8 703 aaKnown RBP8.51□□□□□ -1.05
SMAD1-208ENST00000510948 L3MBTL3Q96JM7 780 aaPredicted RBP8.49□□□□□ -1.05
SMAD1-208ENST00000510948 GABBR2O75899 941 aa8.48□□□□□ -1.05
SMAD1-208ENST00000510948 PLCG2P16885 1265 aa8.48□□□□□ -1.05
SMAD1-208ENST00000510948 MAP3K9P80192 1104 aa8.48□□□□□ -1.05
SMAD1-208ENST00000510948 GRXCR2A6NFK2 248 aa8.44□□□□□ -1.06
SMAD1-208ENST00000510948 DAXXQ9UER7 740 aaPredicted RBP8.44□□□□□ -1.06
SMAD1-208ENST00000510948 C14orf37Q86TY3 774 aa8.43□□□□□ -1.06
SMAD1-208ENST00000510948 TRIM66O15016 1216 aa8.42□□□□□ -1.06
SMAD1-208ENST00000510948 SEC24BO95487 1268 aa8.42□□□□□ -1.06
SMAD1-208ENST00000510948 TMEM92Q6UXU6 159 aa8.42□□□□□ -1.06
SMAD1-208ENST00000510948 OXER1Q8TDS5 423 aa8.42□□□□□ -1.06
SMAD1-208ENST00000510948 GPR37O15354 613 aa8.41□□□□□ -1.06
SMAD1-208ENST00000510948 UPF1Q92900 1129 aaKnown RBP eCLIP8.41□□□□□ -1.06
SMAD1-208ENST00000510948 TBC1D12O60347 775 aa8.4□□□□□ -1.06
SMAD1-208ENST00000510948 OSBPP22059 807 aa8.4□□□□□ -1.06
SMAD1-208ENST00000510948 PTGER2P43116 358 aa8.4□□□□□ -1.06
SMAD1-208ENST00000510948 PELP1Q8IZL8 1130 aaKnown RBP8.4□□□□□ -1.06
SMAD1-208ENST00000510948 DCBLD2Q96PD2 775 aa8.4□□□□□ -1.06
SMAD1-208ENST00000510948 GPBP1L1Q9HC44 474 aaPredicted RBP8.4□□□□□ -1.06
SMAD1-208ENST00000510948 NUTM2FA1L443 756 aa8.39□□□□□ -1.07
SMAD1-208ENST00000510948 PDE4DQ08499 809 aa8.39□□□□□ -1.07
SMAD1-208ENST00000510948 COLQQ9Y215 455 aaPredicted RBP8.39□□□□□ -1.07
SMAD1-208ENST00000510948 MINK1Q8N4C8 1332 aaPredicted RBP8.38□□□□□ -1.07
SMAD1-208ENST00000510948 KDM4CQ9H3R0 1056 aa8.38□□□□□ -1.07
SMAD1-208ENST00000510948 IL27Q8NEV9 243 aa8.37□□□□□ -1.07
SMAD1-208ENST00000510948 SLC39A7Q92504 469 aa8.37□□□□□ -1.07
SMAD1-208ENST00000510948 IRF6O14896 467 aa8.35□□□□□ -1.07
SMAD1-208ENST00000510948 GNPATO15228 680 aa8.35□□□□□ -1.07
SMAD1-208ENST00000510948 EVI5O60447 810 aa8.35□□□□□ -1.07
SMAD1-208ENST00000510948 C7P10643 843 aa8.35□□□□□ -1.07
SMAD1-208ENST00000510948 MAP2K5Q13163 448 aa8.35□□□□□ -1.07
SMAD1-208ENST00000510948 DDX12PQ92771 950 aa8.35□□□□□ -1.07
SMAD1-208ENST00000510948 FCHSD2O94868 740 aa8.34□□□□□ -1.07
SMAD1-208ENST00000510948 PTCD2Q8WV60 388 aaKnown RBP8.34□□□□□ -1.07
SMAD1-208ENST00000510948 POTEFA5A3E0 1075 aa8.33□□□□□ -1.08
SMAD1-208ENST00000510948 HIC1Q14526 733 aa8.33□□□□□ -1.08
SMAD1-208ENST00000510948 SLC34A2O95436 690 aa8.31□□□□□ -1.08
SMAD1-208ENST00000510948 CCDC102AQ96A19 550 aa8.31□□□□□ -1.08
SMAD1-208ENST00000510948 ANO8Q9HCE9 1232 aaPredicted RBP8.31□□□□□ -1.08
SMAD1-208ENST00000510948 ZNF316A6NFI3 1004 aaPredicted RBP8.3□□□□□ -1.08
SMAD1-208ENST00000510948 C3orf67Q6ZVT6 689 aa8.3□□□□□ -1.08
SMAD1-208ENST00000510948 FECHP22830 423 aa8.29□□□□□ -1.08
SMAD1-208ENST00000510948 PRIM1P49642 420 aaKnown RBP8.29□□□□□ -1.08
SMAD1-208ENST00000510948 AMHR2Q16671 573 aa8.29□□□□□ -1.08
SMAD1-208ENST00000510948 METRNQ9UJH8 293 aa8.29□□□□□ -1.08
SMAD1-208ENST00000510948 POTEIP0CG38 1075 aa8.28□□□□□ -1.08
SMAD1-208ENST00000510948 PTGDRQ13258 359 aa8.28□□□□□ -1.08
SMAD1-208ENST00000510948 FAM117AQ9C073 453 aa8.28□□□□□ -1.08
SMAD1-208ENST00000510948 CCDC180Q9P1Z9 1646 aa8.27□□□□□ -1.09
SMAD1-208ENST00000510948 LHX8Q68G74 356 aa8.26□□□□□ -1.09
SMAD1-208ENST00000510948 DDRGK1Q96HY6 314 aa8.26□□□□□ -1.09
SMAD1-208ENST00000510948 EPAS1Q99814 870 aa8.26□□□□□ -1.09
SMAD1-208ENST00000510948 PHF14O94880 888 aa8.25□□□□□ -1.09
SMAD1-208ENST00000510948 PARP9Q8IXQ6 854 aa8.25□□□□□ -1.09
SMAD1-208ENST00000510948 ARXQ96QS3 562 aa8.25□□□□□ -1.09
SMAD1-208ENST00000510948 PLEKHG3A1L390 1219 aa8.23□□□□□ -1.09
SMAD1-208ENST00000510948 EN1Q05925 392 aaPredicted RBP8.23□□□□□ -1.09
SMAD1-208ENST00000510948 NPDC1Q9NQX5 325 aaPredicted RBP8.23□□□□□ -1.09
SMAD1-208ENST00000510948 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.23□□□□□ -1.09
SMAD1-208ENST00000510948 TTLL12Q14166 644 aaPredicted RBP8.21□□□□□ -1.1
SMAD1-208ENST00000510948 SLAIN1Q8ND83 568 aa8.21□□□□□ -1.1
SMAD1-208ENST00000510948 PCDHGA4Q9Y5G9 962 aa8.21□□□□□ -1.1
SMAD1-208ENST00000510948 PCDHGA10Q9Y5H3 936 aa8.21□□□□□ -1.1
SMAD1-208ENST00000510948 MAP3K7O43318 606 aa8.2□□□□□ -1.1
SMAD1-208ENST00000510948 SUPT5HO00267 1087 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms