RNA–Protein interactions for RNA: ENST00000510783.5

RFC1-212, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 723 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-212ENST00000510783 C2orf72A6NCS6 295 aa13.98□□□□□ -0.17
RFC1-212ENST00000510783 DOK7Q18PE1 504 aa13.98□□□□□ -0.17
RFC1-212ENST00000510783 KIF3CO14782 793 aa13.97□□□□□ -0.17
RFC1-212ENST00000510783 ZNF710Q8N1W2 664 aa13.97□□□□□ -0.17
RFC1-212ENST00000510783 RYDENQ9NUL5 291 aaKnown RBP13.97□□□□□ -0.17
RFC1-212ENST00000510783 GTPBP6O43824 516 aaPredicted RBP13.94□□□□□ -0.18
RFC1-212ENST00000510783 TMC2Q8TDI7 906 aa13.93□□□□□ -0.18
RFC1-212ENST00000510783 RIMBP2O15034 1052 aa13.91□□□□□ -0.18
RFC1-212ENST00000510783 EMP3P54852 163 aa13.91□□□□□ -0.18
RFC1-212ENST00000510783 PCDH10Q9P2E7 1040 aa13.9□□□□□ -0.18
RFC1-212ENST00000510783 HOXB1P14653 301 aaPredicted RBP13.89□□□□□ -0.19
RFC1-212ENST00000510783 CDAN1Q8IWY9 1227 aa13.87□□□□□ -0.19
RFC1-212ENST00000510783 ZSWIM6Q9HCJ5 1215 aa13.85□□□□□ -0.19
RFC1-212ENST00000510783 FAM205CA6NFA0 338 aa13.84□□□□□ -0.19
RFC1-212ENST00000510783 GPR153Q6NV75 609 aa13.83□□□□□ -0.2
RFC1-212ENST00000510783 BBXQ8WY36 941 aaPredicted RBP13.82□□□□□ -0.2
RFC1-212ENST00000510783 GPHNQ9NQX3 736 aaPredicted RBP13.82□□□□□ -0.2
RFC1-212ENST00000510783 HS3ST6Q96QI5 342 aa13.81□□□□□ -0.2
RFC1-212ENST00000510783 POTEB3A0JP26 581 aa13.8□□□□□ -0.2
RFC1-212ENST00000510783 ARSIQ5FYB1 569 aa13.8□□□□□ -0.2
RFC1-212ENST00000510783 POTEBQ6S5H4 581 aa13.8□□□□□ -0.2
RFC1-212ENST00000510783 FOXK1P85037 733 aa13.78□□□□□ -0.2
RFC1-212ENST00000510783 KHSRPQ92945 711 aaKnown RBP eCLIP13.77□□□□□ -0.21
RFC1-212ENST00000510783 PLSCR2Q9NRY7 297 aa13.77□□□□□ -0.21
RFC1-212ENST00000510783 ERBB3P21860 1342 aa13.76□□□□□ -0.21
RFC1-212ENST00000510783 DSG2Q14126 1118 aa13.76□□□□□ -0.21
RFC1-212ENST00000510783 PLPP6Q8IY26 295 aa13.76□□□□□ -0.21
RFC1-212ENST00000510783 SLC34A2O95436 690 aa13.74□□□□□ -0.21
RFC1-212ENST00000510783 CRISPLD2Q9H0B8 497 aa13.74□□□□□ -0.21
RFC1-212ENST00000510783 NCKAP5LQ9HCH0 1330 aa13.72□□□□□ -0.21
RFC1-212ENST00000510783 PCDHGA4Q9Y5G9 962 aa13.72□□□□□ -0.21
RFC1-212ENST00000510783 PDE4AP27815 886 aa13.7□□□□□ -0.22
RFC1-212ENST00000510783 VARS2Q5ST30 1063 aaKnown RBP13.7□□□□□ -0.22
RFC1-212ENST00000510783 NUDT7P0C024 238 aa13.69□□□□□ -0.22
RFC1-212ENST00000510783 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.69□□□□□ -0.22
RFC1-212ENST00000510783 CADPS2Q86UW7 1296 aa13.67□□□□□ -0.22
RFC1-212ENST00000510783 SPRYD3Q8NCJ5 442 aa13.67□□□□□ -0.22
RFC1-212ENST00000510783 PPP1R15BQ5SWA1 713 aa13.66□□□□□ -0.22
RFC1-212ENST00000510783 PTCD2Q8WV60 388 aaKnown RBP13.65□□□□□ -0.22
RFC1-212ENST00000510783 LARP6Q9BRS8 491 aaKnown RBP13.65□□□□□ -0.22
RFC1-212ENST00000510783 ZNF316A6NFI3 1004 aaPredicted RBP13.64□□□□□ -0.23
RFC1-212ENST00000510783 KRTAP3-3Q9BYR6 98 aa13.62□□□□□ -0.23
RFC1-212ENST00000510783 KRTAP3-2Q9BYR7 98 aa13.62□□□□□ -0.23
RFC1-212ENST00000510783 PAXIP1Q6ZW49 1069 aaPredicted RBP13.61□□□□□ -0.23
RFC1-212ENST00000510783 CFAP44Q96MT7 982 aa13.61□□□□□ -0.23
RFC1-212ENST00000510783 DDX27Q96GQ7 796 aaKnown RBP13.6□□□□□ -0.23
RFC1-212ENST00000510783 LHX6Q9UPM6 363 aa13.6□□□□□ -0.23
RFC1-212ENST00000510783 ZNF687Q8N1G0 1237 aa13.59□□□□□ -0.23
RFC1-212ENST00000510783 UPF1Q92900 1129 aaKnown RBP eCLIP13.58□□□□□ -0.24
RFC1-212ENST00000510783 TBC1D12O60347 775 aa13.57□□□□□ -0.24
RFC1-212ENST00000510783 MFSD10Q14728 455 aa13.57□□□□□ -0.24
RFC1-212ENST00000510783 KDM4FA0A1W2PPD8 638 aa13.56□□□□□ -0.24
RFC1-212ENST00000510783 OXER1Q8TDS5 423 aa13.56□□□□□ -0.24
RFC1-212ENST00000510783 SPNS2Q8IVW8 549 aa13.52□□□□□ -0.25
RFC1-212ENST00000510783 EMILIN3Q9NT22 766 aa13.46□□□□□ -0.25
RFC1-212ENST00000510783 PSDA5PKW4 1024 aaPredicted RBP13.44□□□□□ -0.26
RFC1-212ENST00000510783 MMRN1Q13201 1228 aa13.43□□□□□ -0.26
RFC1-212ENST00000510783 POTEEQ6S8J3 1075 aa13.43□□□□□ -0.26
RFC1-212ENST00000510783 MAP3K9P80192 1104 aa13.42□□□□□ -0.26
RFC1-212ENST00000510783 AXIN2Q9Y2T1 843 aa13.42□□□□□ -0.26
RFC1-212ENST00000510783 EVI5O60447 810 aa13.4□□□□□ -0.26
RFC1-212ENST00000510783 PBX2P40425 430 aa13.39□□□□□ -0.27
RFC1-212ENST00000510783 CAMK2BQ13554 666 aa13.38□□□□□ -0.27
RFC1-212ENST00000510783 PPP4R3BQ5MIZ7 849 aa13.38□□□□□ -0.27
RFC1-212ENST00000510783 ANKRD13DQ6ZTN6 518 aa13.38□□□□□ -0.27
RFC1-212ENST00000510783 LSM11P83369 360 aaKnown RBP eCLIP13.37□□□□□ -0.27
RFC1-212ENST00000510783 ANO8Q9HCE9 1232 aaPredicted RBP13.37□□□□□ -0.27
RFC1-212ENST00000510783 ZNF454Q8N9F8 522 aa13.35□□□□□ -0.27
RFC1-212ENST00000510783 ARHGAP33O14559 1287 aa13.34□□□□□ -0.27
RFC1-212ENST00000510783 DPYSL4O14531 572 aa13.32□□□□□ -0.28
RFC1-212ENST00000510783 PSEN2P49810 448 aa13.31□□□□□ -0.28
RFC1-212ENST00000510783 FOSBP53539 338 aa13.31□□□□□ -0.28
RFC1-212ENST00000510783 TSHZ2Q9NRE2 1034 aa13.31□□□□□ -0.28
RFC1-212ENST00000510783 WDR70Q9NW82 654 aa13.31□□□□□ -0.28
RFC1-212ENST00000510783 JPH4Q96JJ6 628 aa13.28□□□□□ -0.28
RFC1-212ENST00000510783 E2F4Q16254 413 aa13.27□□□□□ -0.29
RFC1-212ENST00000510783 DMRTA1Q5VZB9 504 aa13.27□□□□□ -0.29
RFC1-212ENST00000510783 KCNK17Q96T54 332 aa13.26□□□□□ -0.29
RFC1-212ENST00000510783 ZDHHC16Q969W1 377 aa13.24□□□□□ -0.29
RFC1-212ENST00000510783 BCL2L12Q9HB09 334 aa13.24□□□□□ -0.29
RFC1-212ENST00000510783 MYT1LQ9UL68 1186 aa13.24□□□□□ -0.29
RFC1-212ENST00000510783 PCDHGA10Q9Y5H3 936 aa13.23□□□□□ -0.29
RFC1-212ENST00000510783 PTGER2P43116 358 aa13.22□□□□□ -0.29
RFC1-212ENST00000510783 ADGRD1Q6QNK2 874 aa13.22□□□□□ -0.29
RFC1-212ENST00000510783 KCNH8Q96L42 1107 aa13.22□□□□□ -0.29
RFC1-212ENST00000510783 ADAM33Q9BZ11 813 aa13.22□□□□□ -0.29
RFC1-212ENST00000510783 RNF166Q96A37 237 aaPredicted RBP13.21□□□□□ -0.29
RFC1-212ENST00000510783 PTPREP23469 700 aa13.19□□□□□ -0.3
RFC1-212ENST00000510783 TK2O00142 265 aa13.18□□□□□ -0.3
RFC1-212ENST00000510783 PHF14O94880 888 aa13.18□□□□□ -0.3
RFC1-212ENST00000510783 PLCB2Q00722 1185 aa13.18□□□□□ -0.3
RFC1-212ENST00000510783 PDIA6Q15084 440 aa13.17□□□□□ -0.3
RFC1-212ENST00000510783 TYW1BQ6NUM6 668 aa13.16□□□□□ -0.3
RFC1-212ENST00000510783 DDX12PQ92771 950 aa13.16□□□□□ -0.3
RFC1-212ENST00000510783 ARIH1Q9Y4X5 557 aaPredicted RBP13.14□□□□□ -0.31
RFC1-212ENST00000510783 SPDYE16A6NNV3 312 aaPredicted RBP13.13□□□□□ -0.31
RFC1-212ENST00000510783 HRO43593 1189 aa13.13□□□□□ -0.31
RFC1-212ENST00000510783 FBXW7Q969H0 707 aa13.13□□□□□ -0.31
RFC1-212ENST00000510783 EPAS1Q99814 870 aa13.12□□□□□ -0.31
RFC1-212ENST00000510783 VPS9D1Q9Y2B5 631 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms