RNA–Protein interactions for RNA: ENST00000510526.2

HMGB3P3-201, Transcript of high mobility group box 3 pseudogene 3, humanhuman

BASIC

Gene HMGB3P3, Length 400 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P3-201ENST00000510526 NLRP6P59044 892 aa6.68□□□□□ -1.34
HMGB3P3-201ENST00000510526 GPR153Q6NV75 609 aa6.68□□□□□ -1.34
HMGB3P3-201ENST00000510526 TMEM92Q6UXU6 159 aa6.68□□□□□ -1.34
HMGB3P3-201ENST00000510526 RNF166Q96A37 237 aaPredicted RBP6.68□□□□□ -1.34
HMGB3P3-201ENST00000510526 RNF25Q96BH1 459 aaPredicted RBP6.68□□□□□ -1.34
HMGB3P3-201ENST00000510526 MS4A4AQ96JQ5 239 aa6.68□□□□□ -1.34
HMGB3P3-201ENST00000510526 PHF8Q9UPP1 1060 aa6.68□□□□□ -1.34
HMGB3P3-201ENST00000510526 MYT1LQ9UL68 1186 aa6.66□□□□□ -1.34
HMGB3P3-201ENST00000510526 BCL11BQ9C0K0 894 aaPredicted RBP6.63□□□□□ -1.35
HMGB3P3-201ENST00000510526 ARSIQ5FYB1 569 aa6.62□□□□□ -1.35
HMGB3P3-201ENST00000510526 ZNF316A6NFI3 1004 aaPredicted RBP6.61□□□□□ -1.35
HMGB3P3-201ENST00000510526 FBXO22Q8NEZ5 403 aa6.61□□□□□ -1.35
HMGB3P3-201ENST00000510526 STK24Q9Y6E0 443 aa6.61□□□□□ -1.35
HMGB3P3-201ENST00000510526 STK25O00506 426 aa6.58□□□□□ -1.36
HMGB3P3-201ENST00000510526 PBX2P40425 430 aa6.58□□□□□ -1.36
HMGB3P3-201ENST00000510526 ANKRD13DQ6ZTN6 518 aa6.58□□□□□ -1.36
HMGB3P3-201ENST00000510526 LSM11P83369 360 aaKnown RBP eCLIP6.57□□□□□ -1.36
HMGB3P3-201ENST00000510526 MFRPQ9BY79 579 aa6.57□□□□□ -1.36
HMGB3P3-201ENST00000510526 C2orf72A6NCS6 295 aa6.56□□□□□ -1.36
HMGB3P3-201ENST00000510526 KIF3CO14782 793 aa6.56□□□□□ -1.36
HMGB3P3-201ENST00000510526 SLC34A2O95436 690 aa6.56□□□□□ -1.36
HMGB3P3-201ENST00000510526 TMC2Q8TDI7 906 aa6.55□□□□□ -1.36
HMGB3P3-201ENST00000510526 KHSRPQ92945 711 aaKnown RBP eCLIP6.55□□□□□ -1.36
HMGB3P3-201ENST00000510526 ECM2O94769 699 aaPredicted RBP6.54□□□□□ -1.36
HMGB3P3-201ENST00000510526 PSDA5PKW4 1024 aaPredicted RBP6.53□□□□□ -1.36
HMGB3P3-201ENST00000510526 NUDT7P0C024 238 aa6.53□□□□□ -1.36
HMGB3P3-201ENST00000510526 PCDHGA4Q9Y5G9 962 aa6.52□□□□□ -1.37
HMGB3P3-201ENST00000510526 LHX6Q9UPM6 363 aa6.51□□□□□ -1.37
HMGB3P3-201ENST00000510526 HCSTQ9UBK5 93 aa6.48□□□□□ -1.37
HMGB3P3-201ENST00000510526 ARHGAP33O14559 1287 aa6.47□□□□□ -1.37
HMGB3P3-201ENST00000510526 AXIN2Q9Y2T1 843 aa6.46□□□□□ -1.38
HMGB3P3-201ENST00000510526 TK2O00142 265 aa6.45□□□□□ -1.38
HMGB3P3-201ENST00000510526 RGL2O15211 777 aa6.45□□□□□ -1.38
HMGB3P3-201ENST00000510526 PKD2Q13563 968 aa6.45□□□□□ -1.38
HMGB3P3-201ENST00000510526 PTCD2Q8WV60 388 aaKnown RBP6.45□□□□□ -1.38
HMGB3P3-201ENST00000510526 TBC1D12O60347 775 aa6.44□□□□□ -1.38
HMGB3P3-201ENST00000510526 ADGRD1Q6QNK2 874 aa6.44□□□□□ -1.38
HMGB3P3-201ENST00000510526 POTEEQ6S8J3 1075 aa6.44□□□□□ -1.38
HMGB3P3-201ENST00000510526 FOXK1P85037 733 aa6.43□□□□□ -1.38
HMGB3P3-201ENST00000510526 KCNH8Q96L42 1107 aa6.42□□□□□ -1.38
HMGB3P3-201ENST00000510526 PLA2G2EQ9NZK7 142 aa6.42□□□□□ -1.38
HMGB3P3-201ENST00000510526 PPP1R37O75864 691 aa6.41□□□□□ -1.38
HMGB3P3-201ENST00000510526 PPP4R3BQ5MIZ7 849 aa6.41□□□□□ -1.38
HMGB3P3-201ENST00000510526 STAC3Q96MF2 364 aa6.41□□□□□ -1.38
HMGB3P3-201ENST00000510526 KDM4FA0A1W2PPD8 638 aa6.4□□□□□ -1.38
HMGB3P3-201ENST00000510526 PLPP6Q8IY26 295 aa6.4□□□□□ -1.38
HMGB3P3-201ENST00000510526 GPHNQ9NQX3 736 aaPredicted RBP6.4□□□□□ -1.38
HMGB3P3-201ENST00000510526 HRO43593 1189 aa6.38□□□□□ -1.39
HMGB3P3-201ENST00000510526 RYDENQ9NUL5 291 aaKnown RBP6.38□□□□□ -1.39
HMGB3P3-201ENST00000510526 HS6ST3Q8IZP7 471 aa6.37□□□□□ -1.39
HMGB3P3-201ENST00000510526 PSEN2P49810 448 aa6.36□□□□□ -1.39
HMGB3P3-201ENST00000510526 DSG2Q14126 1118 aa6.35□□□□□ -1.39
HMGB3P3-201ENST00000510526 DMRTA1Q5VZB9 504 aa6.35□□□□□ -1.39
HMGB3P3-201ENST00000510526 KCTD12Q96CX2 325 aaKnown RBP6.33□□□□□ -1.4
HMGB3P3-201ENST00000510526 KCNK17Q96T54 332 aa6.33□□□□□ -1.4
HMGB3P3-201ENST00000510526 SLC4A5Q9BY07 1137 aa6.32□□□□□ -1.4
HMGB3P3-201ENST00000510526 CHGAP10645 457 aaKnown RBP6.31□□□□□ -1.4
HMGB3P3-201ENST00000510526 OXER1Q8TDS5 423 aa6.31□□□□□ -1.4
HMGB3P3-201ENST00000510526 DNAJC5Q9H3Z4 198 aa6.31□□□□□ -1.4
HMGB3P3-201ENST00000510526 VPS9D1Q9Y2B5 631 aa6.31□□□□□ -1.4
HMGB3P3-201ENST00000510526 ZNF454Q8N9F8 522 aa6.3□□□□□ -1.4
HMGB3P3-201ENST00000510526 BCL2L12Q9HB09 334 aa6.3□□□□□ -1.4
HMGB3P3-201ENST00000510526 RGS20O76081 388 aa6.29□□□□□ -1.4
HMGB3P3-201ENST00000510526 PTPREP23469 700 aa6.28□□□□□ -1.4
HMGB3P3-201ENST00000510526 PDE4AP27815 886 aa6.28□□□□□ -1.4
HMGB3P3-201ENST00000510526 PPP1R15BQ5SWA1 713 aa6.28□□□□□ -1.4
HMGB3P3-201ENST00000510526 IFFO2Q5TF58 517 aa6.28□□□□□ -1.4
HMGB3P3-201ENST00000510526 UPF1Q92900 1129 aaKnown RBP eCLIP6.28□□□□□ -1.4
HMGB3P3-201ENST00000510526 CRISPLD2Q9H0B8 497 aa6.28□□□□□ -1.4
HMGB3P3-201ENST00000510526 GOLGA8CPA6NN73 597 aa6.27□□□□□ -1.41
HMGB3P3-201ENST00000510526 PTPN5P54829 565 aa6.27□□□□□ -1.41
HMGB3P3-201ENST00000510526 FOSBP53539 338 aa6.26□□□□□ -1.41
HMGB3P3-201ENST00000510526 BHMG1C9JSJ3 638 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P3-201ENST00000510526 MRPL50Q8N5N7 158 aaKnown RBP6.25□□□□□ -1.41
HMGB3P3-201ENST00000510526 JPH4Q96JJ6 628 aa6.25□□□□□ -1.41
HMGB3P3-201ENST00000510526 NBPF3Q9H094 633 aa6.25□□□□□ -1.41
HMGB3P3-201ENST00000510526 ANO8Q9HCE9 1232 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P3-201ENST00000510526 THSD4Q6ZMP0 1018 aa6.24□□□□□ -1.41
HMGB3P3-201ENST00000510526 ZBED2Q9BTP6 218 aa6.24□□□□□ -1.41
HMGB3P3-201ENST00000510526 NKX1-1Q15270 411 aaPredicted RBP6.23□□□□□ -1.41
HMGB3P3-201ENST00000510526 WNT2BQ93097 391 aa6.23□□□□□ -1.41
HMGB3P3-201ENST00000510526 ZDHHC16Q969W1 377 aa6.23□□□□□ -1.41
HMGB3P3-201ENST00000510526 EVI5O60447 810 aa6.22□□□□□ -1.41
HMGB3P3-201ENST00000510526 MAP3K9P80192 1104 aa6.21□□□□□ -1.42
HMGB3P3-201ENST00000510526 DDX27Q96GQ7 796 aaKnown RBP6.2□□□□□ -1.42
HMGB3P3-201ENST00000510526 NCKAP5LQ9HCH0 1330 aa6.2□□□□□ -1.42
HMGB3P3-201ENST00000510526 A0A0G2JS52 829 aa6.19□□□□□ -1.42
HMGB3P3-201ENST00000510526 LARP6Q9BRS8 491 aaKnown RBP6.19□□□□□ -1.42
HMGB3P3-201ENST00000510526 PPP1R3GB7ZBB8 358 aa6.18□□□□□ -1.42
HMGB3P3-201ENST00000510526 ADAM33Q9BZ11 813 aa6.18□□□□□ -1.42
HMGB3P3-201ENST00000510526 IRX2Q9BZI1 471 aaPredicted RBP6.18□□□□□ -1.42
HMGB3P3-201ENST00000510526 ANKK1Q8NFD2 765 aa6.17□□□□□ -1.42
HMGB3P3-201ENST00000510526 FBXW7Q969H0 707 aa6.17□□□□□ -1.42
HMGB3P3-201ENST00000510526 RABGEF1Q9UJ41 708 aa6.17□□□□□ -1.42
HMGB3P3-201ENST00000510526 MFSD10Q14728 455 aa6.16□□□□□ -1.42
HMGB3P3-201ENST00000510526 NYAP1Q6ZVC0 841 aa6.16□□□□□ -1.42
HMGB3P3-201ENST00000510526 LAPTM4BQ86VI4 370 aa6.16□□□□□ -1.42
HMGB3P3-201ENST00000510526 GTPBP6O43824 516 aaPredicted RBP6.15□□□□□ -1.42
HMGB3P3-201ENST00000510526 TYW1BQ6NUM6 668 aa6.15□□□□□ -1.42
HMGB3P3-201ENST00000510526 ONECUT3O60422 494 aaPredicted RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms