RNA–Protein interactions for RNA: ENST00000510526.2

HMGB3P3-201, Transcript of high mobility group box 3 pseudogene 3, humanhuman

BASIC

Gene HMGB3P3, Length 400 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P3-201ENST00000510526 NLRP6P59044 892 aa6.68□□□□□ -1.34
HMGB3P3-201ENST00000510526 GPR153Q6NV75 609 aa6.68□□□□□ -1.34
HMGB3P3-201ENST00000510526 TMEM92Q6UXU6 159 aa6.68□□□□□ -1.34
HMGB3P3-201ENST00000510526 RNF166Q96A37 237 aaPredicted RBP6.68□□□□□ -1.34
HMGB3P3-201ENST00000510526 RNF25Q96BH1 459 aaPredicted RBP6.68□□□□□ -1.34
HMGB3P3-201ENST00000510526 MS4A4AQ96JQ5 239 aa6.68□□□□□ -1.34
HMGB3P3-201ENST00000510526 PHF8Q9UPP1 1060 aa6.68□□□□□ -1.34
HMGB3P3-201ENST00000510526 MYT1LQ9UL68 1186 aa6.66□□□□□ -1.34
HMGB3P3-201ENST00000510526 BCL11BQ9C0K0 894 aaPredicted RBP6.63□□□□□ -1.35
HMGB3P3-201ENST00000510526 ARSIQ5FYB1 569 aa6.62□□□□□ -1.35
HMGB3P3-201ENST00000510526 ZNF316A6NFI3 1004 aaPredicted RBP6.61□□□□□ -1.35
HMGB3P3-201ENST00000510526 FBXO22Q8NEZ5 403 aa6.61□□□□□ -1.35
HMGB3P3-201ENST00000510526 STK24Q9Y6E0 443 aa6.61□□□□□ -1.35
HMGB3P3-201ENST00000510526 STK25O00506 426 aa6.58□□□□□ -1.36
HMGB3P3-201ENST00000510526 PBX2P40425 430 aa6.58□□□□□ -1.36
HMGB3P3-201ENST00000510526 ANKRD13DQ6ZTN6 518 aa6.58□□□□□ -1.36
HMGB3P3-201ENST00000510526 LSM11P83369 360 aaKnown RBP eCLIP6.57□□□□□ -1.36
HMGB3P3-201ENST00000510526 MFRPQ9BY79 579 aa6.57□□□□□ -1.36
HMGB3P3-201ENST00000510526 C2orf72A6NCS6 295 aa6.56□□□□□ -1.36
HMGB3P3-201ENST00000510526 KIF3CO14782 793 aa6.56□□□□□ -1.36
HMGB3P3-201ENST00000510526 SLC34A2O95436 690 aa6.56□□□□□ -1.36
HMGB3P3-201ENST00000510526 TMC2Q8TDI7 906 aa6.55□□□□□ -1.36
HMGB3P3-201ENST00000510526 KHSRPQ92945 711 aaKnown RBP eCLIP6.55□□□□□ -1.36
HMGB3P3-201ENST00000510526 ECM2O94769 699 aaPredicted RBP6.54□□□□□ -1.36
HMGB3P3-201ENST00000510526 PSDA5PKW4 1024 aaPredicted RBP6.53□□□□□ -1.36
HMGB3P3-201ENST00000510526 NUDT7P0C024 238 aa6.53□□□□□ -1.36
HMGB3P3-201ENST00000510526 PCDHGA4Q9Y5G9 962 aa6.52□□□□□ -1.37
HMGB3P3-201ENST00000510526 LHX6Q9UPM6 363 aa6.51□□□□□ -1.37
HMGB3P3-201ENST00000510526 HCSTQ9UBK5 93 aa6.48□□□□□ -1.37
HMGB3P3-201ENST00000510526 ARHGAP33O14559 1287 aa6.47□□□□□ -1.37
HMGB3P3-201ENST00000510526 AXIN2Q9Y2T1 843 aa6.46□□□□□ -1.38
HMGB3P3-201ENST00000510526 TK2O00142 265 aa6.45□□□□□ -1.38
HMGB3P3-201ENST00000510526 RGL2O15211 777 aa6.45□□□□□ -1.38
HMGB3P3-201ENST00000510526 PKD2Q13563 968 aa6.45□□□□□ -1.38
HMGB3P3-201ENST00000510526 PTCD2Q8WV60 388 aaKnown RBP6.45□□□□□ -1.38
HMGB3P3-201ENST00000510526 TBC1D12O60347 775 aa6.44□□□□□ -1.38
HMGB3P3-201ENST00000510526 ADGRD1Q6QNK2 874 aa6.44□□□□□ -1.38
HMGB3P3-201ENST00000510526 POTEEQ6S8J3 1075 aa6.44□□□□□ -1.38
HMGB3P3-201ENST00000510526 FOXK1P85037 733 aa6.43□□□□□ -1.38
HMGB3P3-201ENST00000510526 KCNH8Q96L42 1107 aa6.42□□□□□ -1.38
HMGB3P3-201ENST00000510526 PLA2G2EQ9NZK7 142 aa6.42□□□□□ -1.38
HMGB3P3-201ENST00000510526 PPP1R37O75864 691 aa6.41□□□□□ -1.38
HMGB3P3-201ENST00000510526 PPP4R3BQ5MIZ7 849 aa6.41□□□□□ -1.38
HMGB3P3-201ENST00000510526 STAC3Q96MF2 364 aa6.41□□□□□ -1.38
HMGB3P3-201ENST00000510526 KDM4FA0A1W2PPD8 638 aa6.4□□□□□ -1.38
HMGB3P3-201ENST00000510526 PLPP6Q8IY26 295 aa6.4□□□□□ -1.38
HMGB3P3-201ENST00000510526 GPHNQ9NQX3 736 aaPredicted RBP6.4□□□□□ -1.38
HMGB3P3-201ENST00000510526 HRO43593 1189 aa6.38□□□□□ -1.39
HMGB3P3-201ENST00000510526 RYDENQ9NUL5 291 aaKnown RBP6.38□□□□□ -1.39
HMGB3P3-201ENST00000510526 HS6ST3Q8IZP7 471 aa6.37□□□□□ -1.39
HMGB3P3-201ENST00000510526 PSEN2P49810 448 aa6.36□□□□□ -1.39
HMGB3P3-201ENST00000510526 DSG2Q14126 1118 aa6.35□□□□□ -1.39
HMGB3P3-201ENST00000510526 DMRTA1Q5VZB9 504 aa6.35□□□□□ -1.39
HMGB3P3-201ENST00000510526 KCTD12Q96CX2 325 aaKnown RBP6.33□□□□□ -1.4
HMGB3P3-201ENST00000510526 KCNK17Q96T54 332 aa6.33□□□□□ -1.4
HMGB3P3-201ENST00000510526 SLC4A5Q9BY07 1137 aa6.32□□□□□ -1.4
HMGB3P3-201ENST00000510526 CHGAP10645 457 aaKnown RBP6.31□□□□□ -1.4
HMGB3P3-201ENST00000510526 OXER1Q8TDS5 423 aa6.31□□□□□ -1.4
HMGB3P3-201ENST00000510526 DNAJC5Q9H3Z4 198 aa6.31□□□□□ -1.4
HMGB3P3-201ENST00000510526 VPS9D1Q9Y2B5 631 aa6.31□□□□□ -1.4
HMGB3P3-201ENST00000510526 ZNF454Q8N9F8 522 aa6.3□□□□□ -1.4
HMGB3P3-201ENST00000510526 BCL2L12Q9HB09 334 aa6.3□□□□□ -1.4
HMGB3P3-201ENST00000510526 RGS20O76081 388 aa6.29□□□□□ -1.4
HMGB3P3-201ENST00000510526 PTPREP23469 700 aa6.28□□□□□ -1.4
HMGB3P3-201ENST00000510526 PDE4AP27815 886 aa6.28□□□□□ -1.4
HMGB3P3-201ENST00000510526 PPP1R15BQ5SWA1 713 aa6.28□□□□□ -1.4
HMGB3P3-201ENST00000510526 IFFO2Q5TF58 517 aa6.28□□□□□ -1.4
HMGB3P3-201ENST00000510526 UPF1Q92900 1129 aaKnown RBP eCLIP6.28□□□□□ -1.4
HMGB3P3-201ENST00000510526 CRISPLD2Q9H0B8 497 aa6.28□□□□□ -1.4
HMGB3P3-201ENST00000510526 GOLGA8CPA6NN73 597 aa6.27□□□□□ -1.41
HMGB3P3-201ENST00000510526 PTPN5P54829 565 aa6.27□□□□□ -1.41
HMGB3P3-201ENST00000510526 FOSBP53539 338 aa6.26□□□□□ -1.41
HMGB3P3-201ENST00000510526 BHMG1C9JSJ3 638 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P3-201ENST00000510526 MRPL50Q8N5N7 158 aaKnown RBP6.25□□□□□ -1.41
HMGB3P3-201ENST00000510526 JPH4Q96JJ6 628 aa6.25□□□□□ -1.41
HMGB3P3-201ENST00000510526 NBPF3Q9H094 633 aa6.25□□□□□ -1.41
HMGB3P3-201ENST00000510526 ANO8Q9HCE9 1232 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P3-201ENST00000510526 THSD4Q6ZMP0 1018 aa6.24□□□□□ -1.41
HMGB3P3-201ENST00000510526 ZBED2Q9BTP6 218 aa6.24□□□□□ -1.41
HMGB3P3-201ENST00000510526 NKX1-1Q15270 411 aaPredicted RBP6.23□□□□□ -1.41
HMGB3P3-201ENST00000510526 WNT2BQ93097 391 aa6.23□□□□□ -1.41
HMGB3P3-201ENST00000510526 ZDHHC16Q969W1 377 aa6.23□□□□□ -1.41
HMGB3P3-201ENST00000510526 EVI5O60447 810 aa6.22□□□□□ -1.41
HMGB3P3-201ENST00000510526 MAP3K9P80192 1104 aa6.21□□□□□ -1.42
HMGB3P3-201ENST00000510526 DDX27Q96GQ7 796 aaKnown RBP6.2□□□□□ -1.42
HMGB3P3-201ENST00000510526 NCKAP5LQ9HCH0 1330 aa6.2□□□□□ -1.42
HMGB3P3-201ENST00000510526 A0A0G2JS52 829 aa6.19□□□□□ -1.42
HMGB3P3-201ENST00000510526 LARP6Q9BRS8 491 aaKnown RBP6.19□□□□□ -1.42
HMGB3P3-201ENST00000510526 PPP1R3GB7ZBB8 358 aa6.18□□□□□ -1.42
HMGB3P3-201ENST00000510526 ADAM33Q9BZ11 813 aa6.18□□□□□ -1.42
HMGB3P3-201ENST00000510526 IRX2Q9BZI1 471 aaPredicted RBP6.18□□□□□ -1.42
HMGB3P3-201ENST00000510526 ANKK1Q8NFD2 765 aa6.17□□□□□ -1.42
HMGB3P3-201ENST00000510526 FBXW7Q969H0 707 aa6.17□□□□□ -1.42
HMGB3P3-201ENST00000510526 RABGEF1Q9UJ41 708 aa6.17□□□□□ -1.42
HMGB3P3-201ENST00000510526 MFSD10Q14728 455 aa6.16□□□□□ -1.42
HMGB3P3-201ENST00000510526 NYAP1Q6ZVC0 841 aa6.16□□□□□ -1.42
HMGB3P3-201ENST00000510526 LAPTM4BQ86VI4 370 aa6.16□□□□□ -1.42
HMGB3P3-201ENST00000510526 GTPBP6O43824 516 aaPredicted RBP6.15□□□□□ -1.42
HMGB3P3-201ENST00000510526 TYW1BQ6NUM6 668 aa6.15□□□□□ -1.42
HMGB3P3-201ENST00000510526 ONECUT3O60422 494 aaPredicted RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms