RNA–Protein interactions for RNA: ENST00000509978.1

SPOCK1-207, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 4

Gene SPOCK1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-207ENST00000509978 SPDYE16A6NNV3 312 aaPredicted RBP15.81■□□□□ 0.12
SPOCK1-207ENST00000509978 MLLT3P42568 568 aaPredicted RBP15.81■□□□□ 0.12
SPOCK1-207ENST00000509978 RBM26Q5T8P6 1007 aaKnown RBP15.8■□□□□ 0.12
SPOCK1-207ENST00000509978 GPIHBP1Q8IV16 184 aa15.8■□□□□ 0.12
SPOCK1-207ENST00000509978 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.79■□□□□ 0.12
SPOCK1-207ENST00000509978 TTLL13PA6NNM8 815 aa15.77■□□□□ 0.12
SPOCK1-207ENST00000509978 C19orf67A6NJJ6 358 aa15.76■□□□□ 0.11
SPOCK1-207ENST00000509978 PDIA6Q15084 440 aa15.75■□□□□ 0.11
SPOCK1-207ENST00000509978 EMILIN3Q9NT22 766 aa15.74■□□□□ 0.11
SPOCK1-207ENST00000509978 KRI1Q8N9T8 703 aaKnown RBP15.73■□□□□ 0.11
SPOCK1-207ENST00000509978 FOXK1P85037 733 aa15.71■□□□□ 0.11
SPOCK1-207ENST00000509978 DPYSL4O14531 572 aa15.7■□□□□ 0.1
SPOCK1-207ENST00000509978 DSG2Q14126 1118 aa15.7■□□□□ 0.1
SPOCK1-207ENST00000509978 BMP2KQ9NSY1 1161 aaPredicted RBP15.69■□□□□ 0.1
SPOCK1-207ENST00000509978 MICALL2Q8IY33 904 aa15.66■□□□□ 0.1
SPOCK1-207ENST00000509978 TRIM66O15016 1216 aa15.65■□□□□ 0.1
SPOCK1-207ENST00000509978 HOMEZQ8IX15 550 aa15.65■□□□□ 0.1
SPOCK1-207ENST00000509978 TMC2Q8TDI7 906 aa15.65■□□□□ 0.1
SPOCK1-207ENST00000509978 TRIM35Q9UPQ4 493 aa15.65■□□□□ 0.1
SPOCK1-207ENST00000509978 GPBP1L1Q9HC44 474 aaPredicted RBP15.64■□□□□ 0.09
SPOCK1-207ENST00000509978 KDM4CQ9H3R0 1056 aa15.63■□□□□ 0.09
SPOCK1-207ENST00000509978 DPY19L2Q6NUT2 758 aa15.62■□□□□ 0.09
SPOCK1-207ENST00000509978 PDE4DQ08499 809 aa15.61■□□□□ 0.09
SPOCK1-207ENST00000509978 TMEM121BQ9BXQ6 578 aaPredicted RBP15.6■□□□□ 0.09
SPOCK1-207ENST00000509978 GPR37O15354 613 aa15.59■□□□□ 0.09
SPOCK1-207ENST00000509978 CLCN6P51797 869 aa15.59■□□□□ 0.09
SPOCK1-207ENST00000509978 PDCD7Q8N8D1 485 aaKnown RBP15.58■□□□□ 0.08
SPOCK1-207ENST00000509978 IL27Q8NEV9 243 aa15.57■□□□□ 0.08
SPOCK1-207ENST00000509978 PLPP6Q8IY26 295 aa15.56■□□□□ 0.08
SPOCK1-207ENST00000509978 KIF3CO14782 793 aa15.55■□□□□ 0.08
SPOCK1-207ENST00000509978 MINK1Q8N4C8 1332 aaPredicted RBP15.54■□□□□ 0.08
SPOCK1-207ENST00000509978 C2orf72A6NCS6 295 aa15.5■□□□□ 0.07
SPOCK1-207ENST00000509978 GALR2O43603 387 aaPredicted RBP15.5■□□□□ 0.07
SPOCK1-207ENST00000509978 IRX5P78411 483 aaPredicted RBP15.5■□□□□ 0.07
SPOCK1-207ENST00000509978 IER5LQ5T953 404 aa15.5■□□□□ 0.07
SPOCK1-207ENST00000509978 OCEL1Q9H607 264 aa15.5■□□□□ 0.07
SPOCK1-207ENST00000509978 BOLA1Q9Y3E2 137 aa15.5■□□□□ 0.07
SPOCK1-207ENST00000509978 MAP3K9P80192 1104 aa15.49■□□□□ 0.07
SPOCK1-207ENST00000509978 SUPT5HO00267 1087 aaKnown RBP15.48■□□□□ 0.07
SPOCK1-207ENST00000509978 PTGER2P43116 358 aa15.48■□□□□ 0.07
SPOCK1-207ENST00000509978 MAP2K5Q13163 448 aa15.47■□□□□ 0.07
SPOCK1-207ENST00000509978 GRXCR2A6NFK2 248 aa15.44■□□□□ 0.06
SPOCK1-207ENST00000509978 IRF6O14896 467 aa15.44■□□□□ 0.06
SPOCK1-207ENST00000509978 OSBPP22059 807 aa15.44■□□□□ 0.06
SPOCK1-207ENST00000509978 ATN1P54259 1190 aaPredicted RBP15.43■□□□□ 0.06
SPOCK1-207ENST00000509978 AMHR2Q16671 573 aa15.43■□□□□ 0.06
SPOCK1-207ENST00000509978 NUTM2FA1L443 756 aa15.42■□□□□ 0.06
SPOCK1-207ENST00000509978 G3V3G9 751 aa15.42■□□□□ 0.06
SPOCK1-207ENST00000509978 ZMYND15Q9H091 742 aa15.42■□□□□ 0.06
SPOCK1-207ENST00000509978 GNPATO15228 680 aa15.4■□□□□ 0.06
SPOCK1-207ENST00000509978 HIC1Q14526 733 aa15.4■□□□□ 0.06
SPOCK1-207ENST00000509978 ASTLQ6HA08 431 aaPredicted RBP15.4■□□□□ 0.06
SPOCK1-207ENST00000509978 OXER1Q8TDS5 423 aa15.4■□□□□ 0.06
SPOCK1-207ENST00000509978 CCDC102AQ96A19 550 aa15.4■□□□□ 0.06
SPOCK1-207ENST00000509978 DDRGK1Q96HY6 314 aa15.4■□□□□ 0.06
SPOCK1-207ENST00000509978 FAM117AQ9C073 453 aa15.4■□□□□ 0.06
SPOCK1-207ENST00000509978 ATMINO43313 823 aaPredicted RBP15.39■□□□□ 0.05
SPOCK1-207ENST00000509978 FCHSD2O94868 740 aa15.38■□□□□ 0.05
SPOCK1-207ENST00000509978 L3MBTL3Q96JM7 780 aaPredicted RBP15.37■□□□□ 0.05
SPOCK1-207ENST00000509978 PLEKHG3A1L390 1219 aa15.34■□□□□ 0.05
SPOCK1-207ENST00000509978 ZNF316A6NFI3 1004 aaPredicted RBP15.34■□□□□ 0.05
SPOCK1-207ENST00000509978 TBC1D12O60347 775 aa15.33■□□□□ 0.04
SPOCK1-207ENST00000509978 PLCG2P16885 1265 aa15.32■□□□□ 0.04
SPOCK1-207ENST00000509978 PARP9Q8IXQ6 854 aa15.32■□□□□ 0.04
SPOCK1-207ENST00000509978 RSPH6AQ9H0K4 717 aa15.32■□□□□ 0.04
SPOCK1-207ENST00000509978 GOPCQ9HD26 462 aa15.31■□□□□ 0.04
SPOCK1-207ENST00000509978 UPF1Q92900 1129 aaKnown RBP eCLIP15.3■□□□□ 0.04
SPOCK1-207ENST00000509978 TMEM92Q6UXU6 159 aa15.28■□□□□ 0.04
SPOCK1-207ENST00000509978 DDX12PQ92771 950 aa15.27■□□□□ 0.04
SPOCK1-207ENST00000509978 FECHP22830 423 aa15.26■□□□□ 0.03
SPOCK1-207ENST00000509978 PTGDRQ13258 359 aa15.26■□□□□ 0.03
SPOCK1-207ENST00000509978 EVI5O60447 810 aa15.25■□□□□ 0.03
SPOCK1-207ENST00000509978 HAX1O00165 279 aa15.23■□□□□ 0.03
SPOCK1-207ENST00000509978 PTCD2Q8WV60 388 aaKnown RBP15.23■□□□□ 0.03
SPOCK1-207ENST00000509978 ANO8Q9HCE9 1232 aaPredicted RBP15.22■□□□□ 0.03
SPOCK1-207ENST00000509978 PRIM1P49642 420 aaKnown RBP15.21■□□□□ 0.03
SPOCK1-207ENST00000509978 EVX2Q03828 476 aa15.21■□□□□ 0.03
SPOCK1-207ENST00000509978 FLIIQ13045 1269 aa15.21■□□□□ 0.03
SPOCK1-207ENST00000509978 SLC34A2O95436 690 aa15.17■□□□□ 0.02
SPOCK1-207ENST00000509978 TTLL12Q14166 644 aaPredicted RBP15.17■□□□□ 0.02
SPOCK1-207ENST00000509978 GIGYF2Q6Y7W6 1299 aaKnown RBP15.14■□□□□ 0.01
SPOCK1-207ENST00000509978 EPAS1Q99814 870 aa15.14■□□□□ 0.01
SPOCK1-207ENST00000509978 SEC24BO95487 1268 aa15.13■□□□□ 0.01
SPOCK1-207ENST00000509978 NPDC1Q9NQX5 325 aaPredicted RBP15.12■□□□□ 0.01
SPOCK1-207ENST00000509978 PHF14O94880 888 aa15.11■□□□□ 0.01
SPOCK1-207ENST00000509978 TMUB1Q9BVT8 246 aa15.11■□□□□ 0.01
SPOCK1-207ENST00000509978 COLQQ9Y215 455 aaPredicted RBP15.11■□□□□ 0.01
SPOCK1-207ENST00000509978 ONECUT3O60422 494 aaPredicted RBP15.1■□□□□ 0.01
SPOCK1-207ENST00000509978 MS4A1P11836 297 aa15.1■□□□□ 0.01
SPOCK1-207ENST00000509978 EN1Q05925 392 aaPredicted RBP15.1■□□□□ 0.01
SPOCK1-207ENST00000509978 PCMTD1Q96MG8 357 aaPredicted RBP15.08■□□□□ 0
SPOCK1-207ENST00000509978 CLCN1P35523 988 aa15.07■□□□□ 0
SPOCK1-207ENST00000509978 REPIN1Q9BWE0 567 aaKnown RBP15.07■□□□□ 0
SPOCK1-207ENST00000509978 UBTFP17480 764 aaKnown RBP15.05■□□□□ -0
SPOCK1-207ENST00000509978 PELP1Q8IZL8 1130 aaKnown RBP15.05■□□□□ -0
SPOCK1-207ENST00000509978 SLC39A7Q92504 469 aa15.05■□□□□ -0
SPOCK1-207ENST00000509978 SH3D19Q5HYK7 790 aa15.04■□□□□ -0
SPOCK1-207ENST00000509978 C7P10643 843 aa15.02■□□□□ -0
SPOCK1-207ENST00000509978 CDHR5Q9HBB8 845 aa15.02■□□□□ -0
SPOCK1-207ENST00000509978 GPCPD1Q9NPB8 672 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 577.9 ms