RNA–Protein interactions for RNA: ENST00000509882.5

GRAMD2B-209, Transcript of GRAM domain containing 2B, humanhuman

TSL 4

Gene GRAMD2B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD2B-209ENST00000509882 C2orf72A6NCS6 295 aa11.85□□□□□ -0.51
GRAMD2B-209ENST00000509882 CADPS2Q86UW7 1296 aa11.84□□□□□ -0.51
GRAMD2B-209ENST00000509882 KIF3CO14782 793 aa11.82□□□□□ -0.52
GRAMD2B-209ENST00000509882 LCE2DQ5TA82 110 aaPredicted RBP11.8□□□□□ -0.52
GRAMD2B-209ENST00000509882 FAM163AQ96GL9 167 aaPredicted RBP11.79□□□□□ -0.52
GRAMD2B-209ENST00000509882 TMC2Q8TDI7 906 aa11.78□□□□□ -0.52
GRAMD2B-209ENST00000509882 NCKAP5LQ9HCH0 1330 aa11.78□□□□□ -0.52
GRAMD2B-209ENST00000509882 HOXB3P14651 431 aaPredicted RBP11.77□□□□□ -0.53
GRAMD2B-209ENST00000509882 CRISPLD2Q9H0B8 497 aa11.75□□□□□ -0.53
GRAMD2B-209ENST00000509882 GPHNQ9NQX3 736 aaPredicted RBP11.74□□□□□ -0.53
GRAMD2B-209ENST00000509882 ST18O60284 1047 aa11.73□□□□□ -0.53
GRAMD2B-209ENST00000509882 DSG2Q14126 1118 aa11.73□□□□□ -0.53
GRAMD2B-209ENST00000509882 POTEMA6NI47 508 aa11.71□□□□□ -0.53
GRAMD2B-209ENST00000509882 SNPHO15079 494 aa11.7□□□□□ -0.54
GRAMD2B-209ENST00000509882 TSHZ2Q9NRE2 1034 aa11.7□□□□□ -0.54
GRAMD2B-209ENST00000509882 PLCB2Q00722 1185 aa11.69□□□□□ -0.54
GRAMD2B-209ENST00000509882 PLPP6Q8IY26 295 aa11.69□□□□□ -0.54
GRAMD2B-209ENST00000509882 LARP6Q9BRS8 491 aaKnown RBP11.69□□□□□ -0.54
GRAMD2B-209ENST00000509882 FOXK1P85037 733 aa11.68□□□□□ -0.54
GRAMD2B-209ENST00000509882 PDE4AP27815 886 aa11.66□□□□□ -0.54
GRAMD2B-209ENST00000509882 DOK7Q18PE1 504 aa11.66□□□□□ -0.54
GRAMD2B-209ENST00000509882 PPP1R15BQ5SWA1 713 aa11.66□□□□□ -0.54
GRAMD2B-209ENST00000509882 POTEGQ6S5H5 508 aa11.65□□□□□ -0.54
GRAMD2B-209ENST00000509882 MARVELD3Q96A59 401 aa11.65□□□□□ -0.54
GRAMD2B-209ENST00000509882 MFSD10Q14728 455 aa11.63□□□□□ -0.55
GRAMD2B-209ENST00000509882 ZNF710Q8N1W2 664 aa11.63□□□□□ -0.55
GRAMD2B-209ENST00000509882 KHSRPQ92945 711 aaKnown RBP eCLIP11.63□□□□□ -0.55
GRAMD2B-209ENST00000509882 DDX27Q96GQ7 796 aaKnown RBP11.62□□□□□ -0.55
GRAMD2B-209ENST00000509882 ARSIQ5FYB1 569 aa11.6□□□□□ -0.55
GRAMD2B-209ENST00000509882 GPR153Q6NV75 609 aa11.59□□□□□ -0.55
GRAMD2B-209ENST00000509882 UPF1Q92900 1129 aaKnown RBP eCLIP11.58□□□□□ -0.56
GRAMD2B-209ENST00000509882 RIMBP2O15034 1052 aa11.57□□□□□ -0.56
GRAMD2B-209ENST00000509882 HOXB1P14653 301 aaPredicted RBP11.57□□□□□ -0.56
GRAMD2B-209ENST00000509882 PCDHGA4Q9Y5G9 962 aa11.57□□□□□ -0.56
GRAMD2B-209ENST00000509882 SLC34A2O95436 690 aa11.55□□□□□ -0.56
GRAMD2B-209ENST00000509882 HAP1P54257 671 aaPredicted RBP11.55□□□□□ -0.56
GRAMD2B-209ENST00000509882 EMP3P54852 163 aa11.54□□□□□ -0.56
GRAMD2B-209ENST00000509882 ZSWIM6Q9HCJ5 1215 aa11.54□□□□□ -0.56
GRAMD2B-209ENST00000509882 EMILIN3Q9NT22 766 aa11.54□□□□□ -0.56
GRAMD2B-209ENST00000509882 NUDT7P0C024 238 aa11.53□□□□□ -0.56
GRAMD2B-209ENST00000509882 PTCD2Q8WV60 388 aaKnown RBP11.53□□□□□ -0.56
GRAMD2B-209ENST00000509882 POTEB3A0JP26 581 aa11.51□□□□□ -0.57
GRAMD2B-209ENST00000509882 POTEBQ6S5H4 581 aa11.51□□□□□ -0.57
GRAMD2B-209ENST00000509882 OXER1Q8TDS5 423 aa11.51□□□□□ -0.57
GRAMD2B-209ENST00000509882 FAM205CA6NFA0 338 aa11.5□□□□□ -0.57
GRAMD2B-209ENST00000509882 CAMK2BQ13554 666 aa11.47□□□□□ -0.57
GRAMD2B-209ENST00000509882 HS3ST6Q96QI5 342 aa11.47□□□□□ -0.57
GRAMD2B-209ENST00000509882 ERBB3P21860 1342 aa11.45□□□□□ -0.58
GRAMD2B-209ENST00000509882 KDM4FA0A1W2PPD8 638 aa11.45□□□□□ -0.58
GRAMD2B-209ENST00000509882 WDR70Q9NW82 654 aa11.45□□□□□ -0.58
GRAMD2B-209ENST00000509882 PCDH10Q9P2E7 1040 aa11.45□□□□□ -0.58
GRAMD2B-209ENST00000509882 VARS2Q5ST30 1063 aaKnown RBP11.44□□□□□ -0.58
GRAMD2B-209ENST00000509882 LHX6Q9UPM6 363 aa11.44□□□□□ -0.58
GRAMD2B-209ENST00000509882 DPYSL4O14531 572 aa11.43□□□□□ -0.58
GRAMD2B-209ENST00000509882 ZNF316A6NFI3 1004 aaPredicted RBP11.42□□□□□ -0.58
GRAMD2B-209ENST00000509882 E2F4Q16254 413 aa11.42□□□□□ -0.58
GRAMD2B-209ENST00000509882 KDM2AQ9Y2K7 1162 aa11.41□□□□□ -0.58
GRAMD2B-209ENST00000509882 TBC1D12O60347 775 aa11.4□□□□□ -0.58
GRAMD2B-209ENST00000509882 MAP3K9P80192 1104 aa11.4□□□□□ -0.58
GRAMD2B-209ENST00000509882 EVI5O60447 810 aa11.38□□□□□ -0.59
GRAMD2B-209ENST00000509882 CDAN1Q8IWY9 1227 aa11.38□□□□□ -0.59
GRAMD2B-209ENST00000509882 KCNV2Q8TDN2 545 aa11.37□□□□□ -0.59
GRAMD2B-209ENST00000509882 ANO8Q9HCE9 1232 aaPredicted RBP11.31□□□□□ -0.6
GRAMD2B-209ENST00000509882 KRTAP3-3Q9BYR6 98 aa11.3□□□□□ -0.6
GRAMD2B-209ENST00000509882 KRTAP3-2Q9BYR7 98 aa11.3□□□□□ -0.6
GRAMD2B-209ENST00000509882 PDIA6Q15084 440 aa11.29□□□□□ -0.6
GRAMD2B-209ENST00000509882 POTEEQ6S8J3 1075 aa11.29□□□□□ -0.6
GRAMD2B-209ENST00000509882 ZNF687Q8N1G0 1237 aa11.29□□□□□ -0.6
GRAMD2B-209ENST00000509882 ZNF454Q8N9F8 522 aa11.29□□□□□ -0.6
GRAMD2B-209ENST00000509882 AXIN2Q9Y2T1 843 aa11.27□□□□□ -0.61
GRAMD2B-209ENST00000509882 ARIH1Q9Y4X5 557 aaPredicted RBP11.27□□□□□ -0.61
GRAMD2B-209ENST00000509882 FOSBP53539 338 aa11.26□□□□□ -0.61
GRAMD2B-209ENST00000509882 VSIG10Q8N0Z9 540 aa11.26□□□□□ -0.61
GRAMD2B-209ENST00000509882 DDX12PQ92771 950 aa11.26□□□□□ -0.61
GRAMD2B-209ENST00000509882 PPP4R3BQ5MIZ7 849 aa11.24□□□□□ -0.61
GRAMD2B-209ENST00000509882 JPH4Q96JJ6 628 aa11.24□□□□□ -0.61
GRAMD2B-209ENST00000509882 PCDHGA10Q9Y5H3 936 aa11.24□□□□□ -0.61
GRAMD2B-209ENST00000509882 PSDA5PKW4 1024 aaPredicted RBP11.23□□□□□ -0.61
GRAMD2B-209ENST00000509882 ARHGEF1Q92888 912 aaKnown RBP11.22□□□□□ -0.61
GRAMD2B-209ENST00000509882 SPDYE16A6NNV3 312 aaPredicted RBP11.21□□□□□ -0.61
GRAMD2B-209ENST00000509882 PSEN2P49810 448 aa11.21□□□□□ -0.61
GRAMD2B-209ENST00000509882 ADAM33Q9BZ11 813 aa11.21□□□□□ -0.61
GRAMD2B-209ENST00000509882 P3H3Q8IVL6 736 aa11.2□□□□□ -0.62
GRAMD2B-209ENST00000509882 GRXCR2A6NFK2 248 aa11.19□□□□□ -0.62
GRAMD2B-209ENST00000509882 PHF14O94880 888 aa11.18□□□□□ -0.62
GRAMD2B-209ENST00000509882 PTGER2P43116 358 aa11.18□□□□□ -0.62
GRAMD2B-209ENST00000509882 PRIM1P49642 420 aaKnown RBP11.18□□□□□ -0.62
GRAMD2B-209ENST00000509882 DMRTA1Q5VZB9 504 aa11.18□□□□□ -0.62
GRAMD2B-209ENST00000509882 ZDHHC16Q969W1 377 aa11.18□□□□□ -0.62
GRAMD2B-209ENST00000509882 KCNK17Q96T54 332 aa11.18□□□□□ -0.62
GRAMD2B-209ENST00000509882 MLLT3P42568 568 aaPredicted RBP11.17□□□□□ -0.62
GRAMD2B-209ENST00000509882 NBR1Q14596 966 aa11.17□□□□□ -0.62
GRAMD2B-209ENST00000509882 RBM33Q96EV2 1170 aaKnown RBP11.17□□□□□ -0.62
GRAMD2B-209ENST00000509882 TYW1BQ6NUM6 668 aa11.16□□□□□ -0.62
GRAMD2B-209ENST00000509882 ARHGAP33O14559 1287 aa11.15□□□□□ -0.62
GRAMD2B-209ENST00000509882 SEMA3EO15041 775 aa11.15□□□□□ -0.62
GRAMD2B-209ENST00000509882 BCL2L12Q9HB09 334 aa11.15□□□□□ -0.62
GRAMD2B-209ENST00000509882 PBX2P40425 430 aa11.14□□□□□ -0.63
GRAMD2B-209ENST00000509882 LSM11P83369 360 aaKnown RBP eCLIP11.14□□□□□ -0.63
GRAMD2B-209ENST00000509882 ANKRD13DQ6ZTN6 518 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms