RNA–Protein interactions for RNA: ENST00000509625.1

PACRGL-222, Transcript of parkin coregulated like, human

TSL 4

Gene PACRGL, Length 543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PACRGL-222	ENST00000509625	CDC42BPB	Q9Y5S2	1711 aa		34.3	■■■■□ 3.08
PACRGL-222	ENST00000509625	PTPRM	P28827	1452 aa		34.3	■■■■□ 3.08
PACRGL-222	ENST00000509625	POGZ	Q7Z3K3	1410 aa		34.29	■■■■□ 3.08
PACRGL-222	ENST00000509625	SCAPER	Q9BY12	1400 aa		34.29	■■■■□ 3.08
PACRGL-222	ENST00000509625	YEATS2	Q9ULM3	1422 aa		34.29	■■■■□ 3.08
PACRGL-222	ENST00000509625	CLIP1	P30622	1438 aa		34.28	■■■■□ 3.08
PACRGL-222	ENST00000509625	RIMS1	Q86UR5	1692 aa	Known RBP	34.27	■■■■□ 3.08
PACRGL-222	ENST00000509625	ARID4B	Q4LE39	1312 aa	Predicted RBP	34.27	■■■■□ 3.08
PACRGL-222	ENST00000509625	CCDC18	Q5T9S5	1454 aa		34.26	■■■■□ 3.07
PACRGL-222	ENST00000509625	ARHGAP5	Q13017	1502 aa		34.24	■■■■□ 3.07
PACRGL-222	ENST00000509625	MAGI2	Q86UL8	1455 aa		34.23	■■■■□ 3.07
PACRGL-222	ENST00000509625	PREX2	Q70Z35	1606 aa		34.22	■■■■□ 3.07
PACRGL-222	ENST00000509625	FYCO1	Q9BQS8	1478 aa		34.21	■■■■□ 3.07
PACRGL-222	ENST00000509625	EFCAB2	Q5VUJ9	269 aa		34.2	■■■■□ 3.07
PACRGL-222	ENST00000509625	CDC42BPA	Q5VT25	1732 aa		34.18	■■■■□ 3.06
PACRGL-222	ENST00000509625	FER1L4	A9Z1Z3	1794 aa		34.13	■■■■□ 3.05
PACRGL-222	ENST00000509625	KDM5C	P41229	1560 aa		34.13	■■■■□ 3.05
PACRGL-222	ENST00000509625	ZNF518A	Q6AHZ1	1483 aa		34.11	■■■■□ 3.05
PACRGL-222	ENST00000509625	ITSN2	Q9NZM3	1697 aa		34.1	■■■■□ 3.05
PACRGL-222	ENST00000509625	ABCC1	P33527	1531 aa		34.06	■■■■□ 3.04
PACRGL-222	ENST00000509625	ATP10A	O60312	1499 aa		34.06	■■■■□ 3.04
PACRGL-222	ENST00000509625	C9orf84	Q5VXU9	1444 aa		34.04	■■■■□ 3.04
PACRGL-222	ENST00000509625	DIP2C	Q9Y2E4	1556 aa		34.02	■■■■□ 3.04
PACRGL-222	ENST00000509625	ARHGEF12	Q9NZN5	1544 aa		34.01	■■■■□ 3.04
PACRGL-222	ENST00000509625	AFAP1	Q8N556	730 aa		34.01	■■■■□ 3.03
PACRGL-222	ENST00000509625	ABCA6	Q8N139	1617 aa		34.01	■■■■□ 3.03
PACRGL-222	ENST00000509625	MLEC	Q14165	292 aa		33.99	■■■■□ 3.03
PACRGL-222	ENST00000509625	LMTK3	Q96Q04	1460 aa		33.97	■■■■□ 3.03
PACRGL-222	ENST00000509625	TRAPPC8	Q9Y2L5	1435 aa		33.96	■■■■□ 3.03
PACRGL-222	ENST00000509625	SAMD9L	Q8IVG5	1584 aa		33.94	■■■■□ 3.02
PACRGL-222	ENST00000509625	KIDINS220	Q9ULH0	1771 aa		33.93	■■■■□ 3.02
PACRGL-222	ENST00000509625	MLH3	Q9UHC1	1453 aa		33.92	■■■■□ 3.02
PACRGL-222	ENST00000509625	RERE	Q9P2R6	1566 aa		33.92	■■■■□ 3.02
PACRGL-222	ENST00000509625	PLPPR3	Q6T4P5	718 aa		33.91	■■■■□ 3.02
PACRGL-222	ENST00000509625	GPATCH8	Q9UKJ3	1502 aa	Known RBP	33.89	■■■■□ 3.02
PACRGL-222	ENST00000509625	CEP162	Q5TB80	1403 aa		33.88	■■■■□ 3.01
PACRGL-222	ENST00000509625	ILDR1	Q86SU0	546 aa	Predicted RBP	33.87	■■■■□ 3.01
PACRGL-222	ENST00000509625	MYT1L	Q9UL68	1186 aa		33.87	■■■■□ 3.01
PACRGL-222	ENST00000509625	SYCP2	Q9BX26	1530 aa		33.86	■■■■□ 3.01
PACRGL-222	ENST00000509625	ZNF777	Q9ULD5	760 aa	Predicted RBP	33.8	■■■■□ 3
PACRGL-222	ENST00000509625	MTUS2	Q5JR59	1369 aa		33.8	■■■■□ 3
PACRGL-222	ENST00000509625	PREX1	Q8TCU6	1659 aa		33.79	■■■■□ 3
PACRGL-222	ENST00000509625	EHBP1L1	Q8N3D4	1523 aa		33.79	■■■■□ 3
PACRGL-222	ENST00000509625	TIAM1	Q13009	1591 aa		33.77	■■■■□ 3
PACRGL-222	ENST00000509625	AGL	P35573	1532 aa		33.77	■■■■□ 3
PACRGL-222	ENST00000509625	CCNB3	Q8WWL7	1395 aa		33.74	■■■□□ 2.99
PACRGL-222	ENST00000509625	C3	P01024	1663 aa		33.74	■■■□□ 2.99
PACRGL-222	ENST00000509625	HSPA2	P54652	639 aa		33.73	■■■□□ 2.99
PACRGL-222	ENST00000509625	INO80	Q9ULG1	1556 aa	Predicted RBP	33.72	■■■□□ 2.99
PACRGL-222	ENST00000509625	SUPT6H	Q7KZ85	1726 aa	Known RBP	33.7	■■■□□ 2.99
PACRGL-222	ENST00000509625	CEBPA	P49715	358 aa	Predicted RBP	33.7	■■■□□ 2.99
PACRGL-222	ENST00000509625	HNRNPM	P52272	730 aa	Known RBP eCLIP	33.7	■■■□□ 2.99
PACRGL-222	ENST00000509625	SETD1B	Q9UPS6	1966 aa	Known RBP	33.69	■■■□□ 2.98
PACRGL-222	ENST00000509625	CFDP1	Q9UEE9	299 aa	Predicted RBP	33.69	■■■□□ 2.98
PACRGL-222	ENST00000509625	PLEKHH2	Q8IVE3	1493 aa		33.69	■■■□□ 2.98
PACRGL-222	ENST00000509625	ATP7A	Q04656	1500 aa		33.69	■■■□□ 2.98
PACRGL-222	ENST00000509625	KIAA1107	Q9UPP5	1409 aa		33.68	■■■□□ 2.98
PACRGL-222	ENST00000509625	SPAG9	O60271	1321 aa	Known RBP	33.63	■■■□□ 2.97
PACRGL-222	ENST00000509625	PLXNC1	O60486	1568 aa		33.6	■■■□□ 2.97
PACRGL-222	ENST00000509625	LOC105371045	A0A1W2PR82	267 aa		33.6	■■■□□ 2.97
PACRGL-222	ENST00000509625	ADGB	Q8N7X0	1667 aa		33.58	■■■□□ 2.97
PACRGL-222	ENST00000509625	ZNF644	Q9H582	1327 aa	Predicted RBP	33.57	■■■□□ 2.97
PACRGL-222	ENST00000509625	MROH2A	A6NES4	1674 aa		33.57	■■■□□ 2.96
PACRGL-222	ENST00000509625	STRC	Q7RTU9	1775 aa		33.55	■■■□□ 2.96
PACRGL-222	ENST00000509625	NCOA2	Q15596	1464 aa		33.54	■■■□□ 2.96
PACRGL-222	ENST00000509625	MBD5	Q9P267	1494 aa		33.54	■■■□□ 2.96
PACRGL-222	ENST00000509625	A2M	P01023	1474 aa		33.52	■■■□□ 2.96
PACRGL-222	ENST00000509625	CLTC	Q00610	1675 aa	Known RBP	33.52	■■■□□ 2.96
PACRGL-222	ENST00000509625	UHRF1BP1	Q6BDS2	1440 aa		33.51	■■■□□ 2.95
PACRGL-222	ENST00000509625	VPS8	Q8N3P4	1428 aa		33.51	■■■□□ 2.95
PACRGL-222	ENST00000509625	ESF1	Q9H501	851 aa	Known RBP	33.5	■■■□□ 2.95
PACRGL-222	ENST00000509625	CNTLN	Q9NXG0	1405 aa		33.5	■■■□□ 2.95
PACRGL-222	ENST00000509625	CAMSAP2	Q08AD1	1489 aa		33.46	■■■□□ 2.95
PACRGL-222	ENST00000509625	FBXO41	Q8TF61	875 aa		33.42	■■■□□ 2.94
PACRGL-222	ENST00000509625	LRRC9	Q6ZRR7	1453 aa		33.42	■■■□□ 2.94
PACRGL-222	ENST00000509625	CCDC141	Q6ZP82	1450 aa		33.39	■■■□□ 2.94
PACRGL-222	ENST00000509625	RTEL1-TNFRSF6B	F6WH68	1400 aa		33.38	■■■□□ 2.93
PACRGL-222	ENST00000509625	ZMYM3	Q14202	1370 aa		33.34	■■■□□ 2.93
PACRGL-222	ENST00000509625	ARHGEF5	Q12774	1597 aa		33.34	■■■□□ 2.93
PACRGL-222	ENST00000509625	MAP3K1	Q13233	1512 aa		33.33	■■■□□ 2.93
PACRGL-222	ENST00000509625	NPAT	Q14207	1427 aa		33.32	■■■□□ 2.92
PACRGL-222	ENST00000509625	GGT6	Q6P531	493 aa		33.31	■■■□□ 2.92
PACRGL-222	ENST00000509625	MYO3A	Q8NEV4	1616 aa		33.31	■■■□□ 2.92
PACRGL-222	ENST00000509625	ZNF142	P52746	1687 aa	Predicted RBP	33.29	■■■□□ 2.92
PACRGL-222	ENST00000509625	DHX29	Q7Z478	1369 aa	Known RBP	33.27	■■■□□ 2.92
PACRGL-222	ENST00000509625	KANK4	Q5T7N3	995 aa	Predicted RBP	33.27	■■■□□ 2.92
PACRGL-222	ENST00000509625	PTPRK	Q15262	1439 aa		33.23	■■■□□ 2.91
PACRGL-222	ENST00000509625	CAMSAP1	Q5T5Y3	1602 aa		33.23	■■■□□ 2.91
PACRGL-222	ENST00000509625	NCOA1	Q15788	1441 aa		33.21	■■■□□ 2.91
PACRGL-222	ENST00000509625	RSPH4A	Q5TD94	716 aa		33.21	■■■□□ 2.91
PACRGL-222	ENST00000509625	CERK	Q8TCT0	537 aa		33.2	■■■□□ 2.91
PACRGL-222	ENST00000509625	DMRT2	Q9Y5R5	561 aa		33.2	■■■□□ 2.91
PACRGL-222	ENST00000509625	MAST1	Q9Y2H9	1570 aa		33.19	■■■□□ 2.9
PACRGL-222	ENST00000509625	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	33.19	■■■□□ 2.9
PACRGL-222	ENST00000509625	PPP6R1	Q9UPN7	881 aa		33.18	■■■□□ 2.9
PACRGL-222	ENST00000509625	PTPRT	O14522	1441 aa		33.18	■■■□□ 2.9
PACRGL-222	ENST00000509625	MYOM3	Q5VTT5	1437 aa		33.17	■■■□□ 2.9
PACRGL-222	ENST00000509625	KDM5D	Q9BY66	1539 aa		33.15	■■■□□ 2.9
PACRGL-222	ENST00000509625	KIF3B	O15066	747 aa		33.14	■■■□□ 2.9
PACRGL-222	ENST00000509625	FAM135A	Q9P2D6	1515 aa		33.12	■■■□□ 2.89

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