RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 ARID4BQ4LE39 1312 aaPredicted RBP22.38■■□□□ 1.17
DDX41-210ENST00000509576 FER1L4A9Z1Z3 1794 aa22.38■■□□□ 1.17
DDX41-210ENST00000509576 SCAPERQ9BY12 1400 aa22.36■■□□□ 1.17
DDX41-210ENST00000509576 CDC42BPBQ9Y5S2 1711 aa22.35■■□□□ 1.17
DDX41-210ENST00000509576 FMN1Q68DA7 1419 aa22.34■■□□□ 1.17
DDX41-210ENST00000509576 MAGI2Q86UL8 1455 aa22.34■■□□□ 1.17
DDX41-210ENST00000509576 UBTFP17480 764 aaKnown RBP22.33■■□□□ 1.17
DDX41-210ENST00000509576 ARHGEF12Q9NZN5 1544 aa22.3■■□□□ 1.16
DDX41-210ENST00000509576 KDM5CP41229 1560 aa22.29■■□□□ 1.16
DDX41-210ENST00000509576 TROQ12816 1431 aaPredicted RBP22.29■■□□□ 1.16
DDX41-210ENST00000509576 ATP1B4Q9UN42 357 aaPredicted RBP22.27■■□□□ 1.16
DDX41-210ENST00000509576 HSPA2P54652 639 aa22.26■■□□□ 1.15
DDX41-210ENST00000509576 ATP10AO60312 1499 aa22.25■■□□□ 1.15
DDX41-210ENST00000509576 DIP2CQ9Y2E4 1556 aa22.25■■□□□ 1.15
DDX41-210ENST00000509576 PREX2Q70Z35 1606 aa22.24■■□□□ 1.15
DDX41-210ENST00000509576 MLECQ14165 292 aa22.24■■□□□ 1.15
DDX41-210ENST00000509576 ABCA6Q8N139 1617 aa22.24■■□□□ 1.15
DDX41-210ENST00000509576 ARHGAP5Q13017 1502 aa22.23■■□□□ 1.15
DDX41-210ENST00000509576 PLPPR3Q6T4P5 718 aa22.23■■□□□ 1.15
DDX41-210ENST00000509576 CDC42BPAQ5VT25 1732 aa22.23■■□□□ 1.15
DDX41-210ENST00000509576 C9orf84Q5VXU9 1444 aa22.23■■□□□ 1.15
DDX41-210ENST00000509576 ITSN2Q9NZM3 1697 aa22.21■■□□□ 1.15
DDX41-210ENST00000509576 EFCAB2Q5VUJ9 269 aa22.2■■□□□ 1.14
DDX41-210ENST00000509576 AFAP1Q8N556 730 aa22.2■■□□□ 1.14
DDX41-210ENST00000509576 FBXO41Q8TF61 875 aa22.2■■□□□ 1.14
DDX41-210ENST00000509576 ZNF518AQ6AHZ1 1483 aa22.2■■□□□ 1.14
DDX41-210ENST00000509576 ABCC1P33527 1531 aa22.19■■□□□ 1.14
DDX41-210ENST00000509576 PREX1Q8TCU6 1659 aa22.18■■□□□ 1.14
DDX41-210ENST00000509576 CASKIN1Q8WXD9 1431 aa22.17■■□□□ 1.14
DDX41-210ENST00000509576 TRAPPC8Q9Y2L5 1435 aa22.16■■□□□ 1.14
DDX41-210ENST00000509576 STRCQ7RTU9 1775 aa22.16■■□□□ 1.14
DDX41-210ENST00000509576 KIDINS220Q9ULH0 1771 aa22.16■■□□□ 1.14
DDX41-210ENST00000509576 REREQ9P2R6 1566 aa22.16■■□□□ 1.14
DDX41-210ENST00000509576 CEBPAP49715 358 aaPredicted RBP22.14■■□□□ 1.13
DDX41-210ENST00000509576 CLIP1P30622 1438 aa22.14■■□□□ 1.13
DDX41-210ENST00000509576 C3P01024 1663 aa22.14■■□□□ 1.13
DDX41-210ENST00000509576 CDK11AQ9UQ88 783 aaPredicted RBP22.13■■□□□ 1.13
DDX41-210ENST00000509576 MLH3Q9UHC1 1453 aa22.12■■□□□ 1.13
DDX41-210ENST00000509576 CCDC18Q5T9S5 1454 aa22.1■■□□□ 1.13
DDX41-210ENST00000509576 SAMD9LQ8IVG5 1584 aa22.1■■□□□ 1.13
DDX41-210ENST00000509576 FYCO1Q9BQS8 1478 aa22.08■■□□□ 1.12
DDX41-210ENST00000509576 SETD1BQ9UPS6 1966 aaKnown RBP22.06■■□□□ 1.12
DDX41-210ENST00000509576 AGLP35573 1532 aa22.06■■□□□ 1.12
DDX41-210ENST00000509576 SYCP2Q9BX26 1530 aa22.02■■□□□ 1.12
DDX41-210ENST00000509576 GPATCH8Q9UKJ3 1502 aaKnown RBP22.02■■□□□ 1.12
DDX41-210ENST00000509576 SUPT6HQ7KZ85 1726 aaKnown RBP21.97■■□□□ 1.11
DDX41-210ENST00000509576 INO80Q9ULG1 1556 aaPredicted RBP21.97■■□□□ 1.11
DDX41-210ENST00000509576 CERKQ8TCT0 537 aa21.95■■□□□ 1.1
DDX41-210ENST00000509576 UHRF1BP1Q6BDS2 1440 aa21.94■■□□□ 1.1
DDX41-210ENST00000509576 PLXNC1O60486 1568 aa21.94■■□□□ 1.1
DDX41-210ENST00000509576 MROH2AA6NES4 1674 aa21.93■■□□□ 1.1
DDX41-210ENST00000509576 MYT1LQ9UL68 1186 aa21.93■■□□□ 1.1
DDX41-210ENST00000509576 ATP7AQ04656 1500 aa21.91■■□□□ 1.1
DDX41-210ENST00000509576 TIAM1Q13009 1591 aa21.91■■□□□ 1.1
DDX41-210ENST00000509576 HNRNPMP52272 730 aaKnown RBP eCLIP21.9■■□□□ 1.1
DDX41-210ENST00000509576 CLTCQ00610 1675 aaKnown RBP21.9■■□□□ 1.1
DDX41-210ENST00000509576 ZNF777Q9ULD5 760 aaPredicted RBP21.89■■□□□ 1.09
DDX41-210ENST00000509576 LTBP4Q8N2S1 1624 aa21.86■■□□□ 1.09
DDX41-210ENST00000509576 KIAA1107Q9UPP5 1409 aa21.85■■□□□ 1.09
DDX41-210ENST00000509576 ZNF644Q9H582 1327 aaPredicted RBP21.83■■□□□ 1.09
DDX41-210ENST00000509576 NCOA1Q15788 1441 aa21.83■■□□□ 1.09
DDX41-210ENST00000509576 ADGBQ8N7X0 1667 aa21.83■■□□□ 1.09
DDX41-210ENST00000509576 MBD5Q9P267 1494 aa21.83■■□□□ 1.08
DDX41-210ENST00000509576 SPAG9O60271 1321 aaKnown RBP21.82■■□□□ 1.08
DDX41-210ENST00000509576 PTPRTO14522 1441 aa21.82■■□□□ 1.08
DDX41-210ENST00000509576 CNTLNQ9NXG0 1405 aa21.82■■□□□ 1.08
DDX41-210ENST00000509576 A2MP01023 1474 aa21.82■■□□□ 1.08
DDX41-210ENST00000509576 ZNF142P52746 1687 aaPredicted RBP21.82■■□□□ 1.08
DDX41-210ENST00000509576 MYO3AQ8NEV4 1616 aa21.81■■□□□ 1.08
DDX41-210ENST00000509576 CAMSAP1Q5T5Y3 1602 aa21.8■■□□□ 1.08
DDX41-210ENST00000509576 CCNB3Q8WWL7 1395 aa21.8■■□□□ 1.08
DDX41-210ENST00000509576 EHBP1L1Q8N3D4 1523 aa21.8■■□□□ 1.08
DDX41-210ENST00000509576 ZMYM3Q14202 1370 aa21.79■■□□□ 1.08
DDX41-210ENST00000509576 CFDP1Q9UEE9 299 aaPredicted RBP21.79■■□□□ 1.08
DDX41-210ENST00000509576 NPATQ14207 1427 aa21.79■■□□□ 1.08
DDX41-210ENST00000509576 PLEKHH2Q8IVE3 1493 aa21.78■■□□□ 1.08
DDX41-210ENST00000509576 MTUS2Q5JR59 1369 aa21.77■■□□□ 1.08
DDX41-210ENST00000509576 PTPRKQ15262 1439 aa21.76■■□□□ 1.07
DDX41-210ENST00000509576 CEP162Q5TB80 1403 aa21.74■■□□□ 1.07
DDX41-210ENST00000509576 CEP170BQ9Y4F5 1589 aaPredicted RBP21.74■■□□□ 1.07
DDX41-210ENST00000509576 DMRT2Q9Y5R5 561 aa21.73■■□□□ 1.07
DDX41-210ENST00000509576 ESF1Q9H501 851 aaKnown RBP21.72■■□□□ 1.07
DDX41-210ENST00000509576 NCKAP5LQ9HCH0 1330 aa21.68■■□□□ 1.06
DDX41-210ENST00000509576 NCOA2Q15596 1464 aa21.68■■□□□ 1.06
DDX41-210ENST00000509576 CAMSAP2Q08AD1 1489 aa21.67■■□□□ 1.06
DDX41-210ENST00000509576 TCOF1Q13428 1488 aaKnown RBP21.67■■□□□ 1.06
DDX41-210ENST00000509576 GGT6Q6P531 493 aa21.67■■□□□ 1.06
DDX41-210ENST00000509576 RTEL1-TNFRSF6BF6WH68 1400 aa21.66■■□□□ 1.06
DDX41-210ENST00000509576 DNMT1P26358 1616 aaKnown RBP21.66■■□□□ 1.06
DDX41-210ENST00000509576 PLA2R1Q13018 1463 aa21.64■■□□□ 1.06
DDX41-210ENST00000509576 CCDC141Q6ZP82 1450 aa21.63■■□□□ 1.05
DDX41-210ENST00000509576 DHX29Q7Z478 1369 aaKnown RBP21.62■■□□□ 1.05
DDX41-210ENST00000509576 ZNF335Q9H4Z2 1342 aaPredicted RBP21.62■■□□□ 1.05
DDX41-210ENST00000509576 IQSEC2Q5JU85 1478 aa21.62■■□□□ 1.05
DDX41-210ENST00000509576 NEURL4Q96JN8 1562 aa21.61■■□□□ 1.05
DDX41-210ENST00000509576 POLR1AO95602 1720 aaPredicted RBP21.6■■□□□ 1.05
DDX41-210ENST00000509576 ILDR2Q71H61 639 aa21.6■■□□□ 1.05
DDX41-210ENST00000509576 ARHGEF5Q12774 1597 aa21.6■■□□□ 1.05
DDX41-210ENST00000509576 A2ML1A8K2U0 1454 aa21.58■■□□□ 1.05
DDX41-210ENST00000509576 FBXO31Q5XUX0 539 aaPredicted RBP21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms