RNA–Protein interactions for RNA: ENST00000509165.1

NFKB1-208, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 5

Gene NFKB1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-208ENST00000509165 PHF8Q9UPP1 1060 aa11.51□□□□□ -0.57
NFKB1-208ENST00000509165 FBXO22Q8NEZ5 403 aa11.5□□□□□ -0.57
NFKB1-208ENST00000509165 MS4A4AQ96JQ5 239 aa11.49□□□□□ -0.57
NFKB1-208ENST00000509165 L3MBTL3Q96JM7 780 aaPredicted RBP11.48□□□□□ -0.57
NFKB1-208ENST00000509165 DPY19L2Q6NUT2 758 aa11.46□□□□□ -0.57
NFKB1-208ENST00000509165 NLRP6P59044 892 aa11.45□□□□□ -0.58
NFKB1-208ENST00000509165 RNF166Q96A37 237 aaPredicted RBP11.44□□□□□ -0.58
NFKB1-208ENST00000509165 BBXQ8WY36 941 aaPredicted RBP11.4□□□□□ -0.58
NFKB1-208ENST00000509165 GTPBP6O43824 516 aaPredicted RBP11.38□□□□□ -0.59
NFKB1-208ENST00000509165 HOXB3P14651 431 aaPredicted RBP11.38□□□□□ -0.59
NFKB1-208ENST00000509165 ERBB3P21860 1342 aa11.36□□□□□ -0.59
NFKB1-208ENST00000509165 PPP1R37O75864 691 aa11.35□□□□□ -0.59
NFKB1-208ENST00000509165 HOXB1P14653 301 aaPredicted RBP11.34□□□□□ -0.59
NFKB1-208ENST00000509165 MYT1LQ9UL68 1186 aa11.34□□□□□ -0.59
NFKB1-208ENST00000509165 BOLA1Q9Y3E2 137 aa11.34□□□□□ -0.59
NFKB1-208ENST00000509165 ZNF710Q8N1W2 664 aa11.33□□□□□ -0.6
NFKB1-208ENST00000509165 MICALL2Q8IY33 904 aa11.31□□□□□ -0.6
NFKB1-208ENST00000509165 RYDENQ9NUL5 291 aaKnown RBP11.31□□□□□ -0.6
NFKB1-208ENST00000509165 VARS2Q5ST30 1063 aaKnown RBP11.28□□□□□ -0.6
NFKB1-208ENST00000509165 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.26□□□□□ -0.61
NFKB1-208ENST00000509165 G3V3G9 751 aa11.24□□□□□ -0.61
NFKB1-208ENST00000509165 DOK7Q18PE1 504 aa11.23□□□□□ -0.61
NFKB1-208ENST00000509165 SPRYD3Q8NCJ5 442 aa11.23□□□□□ -0.61
NFKB1-208ENST00000509165 TMEM92Q6UXU6 159 aa11.22□□□□□ -0.61
NFKB1-208ENST00000509165 PAXIP1Q6ZW49 1069 aaPredicted RBP11.2□□□□□ -0.62
NFKB1-208ENST00000509165 ZNF687Q8N1G0 1237 aa11.17□□□□□ -0.62
NFKB1-208ENST00000509165 CFAP44Q96MT7 982 aa11.17□□□□□ -0.62
NFKB1-208ENST00000509165 KIF3CO14782 793 aa11.14□□□□□ -0.63
NFKB1-208ENST00000509165 RIMBP2O15034 1052 aa11.14□□□□□ -0.63
NFKB1-208ENST00000509165 ANKRD13DQ6ZTN6 518 aa11.12□□□□□ -0.63
NFKB1-208ENST00000509165 CADPS2Q86UW7 1296 aa11.11□□□□□ -0.63
NFKB1-208ENST00000509165 C2orf72A6NCS6 295 aa11.1□□□□□ -0.63
NFKB1-208ENST00000509165 PTGER2P43116 358 aa11.1□□□□□ -0.63
NFKB1-208ENST00000509165 PLCB2Q00722 1185 aa11.1□□□□□ -0.63
NFKB1-208ENST00000509165 CRISPLD2Q9H0B8 497 aa11.09□□□□□ -0.63
NFKB1-208ENST00000509165 NCKAP5LQ9HCH0 1330 aa11.09□□□□□ -0.63
NFKB1-208ENST00000509165 GPHNQ9NQX3 736 aaPredicted RBP11.07□□□□□ -0.64
NFKB1-208ENST00000509165 GPR153Q6NV75 609 aa11.06□□□□□ -0.64
NFKB1-208ENST00000509165 TMC2Q8TDI7 906 aa11.05□□□□□ -0.64
NFKB1-208ENST00000509165 ZSWIM6Q9HCJ5 1215 aa11.04□□□□□ -0.64
NFKB1-208ENST00000509165 FOXK1P85037 733 aa11.02□□□□□ -0.65
NFKB1-208ENST00000509165 TSHZ2Q9NRE2 1034 aa11.02□□□□□ -0.65
NFKB1-208ENST00000509165 PLA2G2EQ9NZK7 142 aa11.02□□□□□ -0.65
NFKB1-208ENST00000509165 PDE4AP27815 886 aa11.01□□□□□ -0.65
NFKB1-208ENST00000509165 DSG2Q14126 1118 aa11□□□□□ -0.65
NFKB1-208ENST00000509165 MFSD10Q14728 455 aa11□□□□□ -0.65
NFKB1-208ENST00000509165 ARSIQ5FYB1 569 aa10.98□□□□□ -0.65
NFKB1-208ENST00000509165 LARP6Q9BRS8 491 aaKnown RBP10.97□□□□□ -0.65
NFKB1-208ENST00000509165 LSM11P83369 360 aaKnown RBP eCLIP10.96□□□□□ -0.65
NFKB1-208ENST00000509165 PLPP6Q8IY26 295 aa10.96□□□□□ -0.65
NFKB1-208ENST00000509165 PPP1R15BQ5SWA1 713 aa10.95□□□□□ -0.66
NFKB1-208ENST00000509165 KHSRPQ92945 711 aaKnown RBP eCLIP10.95□□□□□ -0.66
NFKB1-208ENST00000509165 DDX27Q96GQ7 796 aaKnown RBP10.93□□□□□ -0.66
NFKB1-208ENST00000509165 ZNF316A6NFI3 1004 aaPredicted RBP10.92□□□□□ -0.66
NFKB1-208ENST00000509165 SLC34A2O95436 690 aa10.92□□□□□ -0.66
NFKB1-208ENST00000509165 HAP1P54257 671 aaPredicted RBP10.87□□□□□ -0.67
NFKB1-208ENST00000509165 PTCD2Q8WV60 388 aaKnown RBP10.87□□□□□ -0.67
NFKB1-208ENST00000509165 HCSTQ9UBK5 93 aa10.87□□□□□ -0.67
NFKB1-208ENST00000509165 CAMK2BQ13554 666 aa10.86□□□□□ -0.67
NFKB1-208ENST00000509165 OXER1Q8TDS5 423 aa10.85□□□□□ -0.67
NFKB1-208ENST00000509165 AXIN2Q9Y2T1 843 aa10.85□□□□□ -0.67
NFKB1-208ENST00000509165 EMILIN3Q9NT22 766 aa10.84□□□□□ -0.67
NFKB1-208ENST00000509165 PCDHGA4Q9Y5G9 962 aa10.84□□□□□ -0.67
NFKB1-208ENST00000509165 POTEEQ6S8J3 1075 aa10.83□□□□□ -0.68
NFKB1-208ENST00000509165 KDM4FA0A1W2PPD8 638 aa10.82□□□□□ -0.68
NFKB1-208ENST00000509165 KDM2AQ9Y2K7 1162 aa10.8□□□□□ -0.68
NFKB1-208ENST00000509165 UPF1Q92900 1129 aaKnown RBP eCLIP10.79□□□□□ -0.68
NFKB1-208ENST00000509165 WDR70Q9NW82 654 aa10.79□□□□□ -0.68
NFKB1-208ENST00000509165 PBX2P40425 430 aa10.78□□□□□ -0.68
NFKB1-208ENST00000509165 E2F4Q16254 413 aa10.77□□□□□ -0.69
NFKB1-208ENST00000509165 NUDT7P0C024 238 aa10.76□□□□□ -0.69
NFKB1-208ENST00000509165 TBC1D12O60347 775 aa10.74□□□□□ -0.69
NFKB1-208ENST00000509165 VSIG10Q8N0Z9 540 aa10.74□□□□□ -0.69
NFKB1-208ENST00000509165 ARIH1Q9Y4X5 557 aaPredicted RBP10.74□□□□□ -0.69
NFKB1-208ENST00000509165 LHX6Q9UPM6 363 aa10.73□□□□□ -0.69
NFKB1-208ENST00000509165 ADGRD1Q6QNK2 874 aa10.72□□□□□ -0.69
NFKB1-208ENST00000509165 DPYSL4O14531 572 aa10.71□□□□□ -0.69
NFKB1-208ENST00000509165 MAP3K9P80192 1104 aa10.7□□□□□ -0.7
NFKB1-208ENST00000509165 KCNV2Q8TDN2 545 aa10.7□□□□□ -0.7
NFKB1-208ENST00000509165 ANO8Q9HCE9 1232 aaPredicted RBP10.7□□□□□ -0.7
NFKB1-208ENST00000509165 EVI5O60447 810 aa10.69□□□□□ -0.7
NFKB1-208ENST00000509165 PDIA6Q15084 440 aa10.65□□□□□ -0.7
NFKB1-208ENST00000509165 ARHGEF1Q92888 912 aaKnown RBP10.64□□□□□ -0.71
NFKB1-208ENST00000509165 KCTD12Q96CX2 325 aaKnown RBP10.64□□□□□ -0.71
NFKB1-208ENST00000509165 IRX2Q9BZI1 471 aaPredicted RBP10.64□□□□□ -0.71
NFKB1-208ENST00000509165 ARHGAP33O14559 1287 aa10.63□□□□□ -0.71
NFKB1-208ENST00000509165 SPDYE16A6NNV3 312 aaPredicted RBP10.62□□□□□ -0.71
NFKB1-208ENST00000509165 P3H3Q8IVL6 736 aa10.62□□□□□ -0.71
NFKB1-208ENST00000509165 HRO43593 1189 aa10.6□□□□□ -0.71
NFKB1-208ENST00000509165 PSDA5PKW4 1024 aaPredicted RBP10.59□□□□□ -0.71
NFKB1-208ENST00000509165 FOSBP53539 338 aa10.59□□□□□ -0.71
NFKB1-208ENST00000509165 DMRTA1Q5VZB9 504 aa10.59□□□□□ -0.71
NFKB1-208ENST00000509165 JPH4Q96JJ6 628 aa10.58□□□□□ -0.72
NFKB1-208ENST00000509165 PSEN2P49810 448 aa10.57□□□□□ -0.72
NFKB1-208ENST00000509165 TK2O00142 265 aa10.56□□□□□ -0.72
NFKB1-208ENST00000509165 PCDHGA10Q9Y5H3 936 aa10.56□□□□□ -0.72
NFKB1-208ENST00000509165 ZNF454Q8N9F8 522 aa10.55□□□□□ -0.72
NFKB1-208ENST00000509165 SLC24A1O60721 1099 aa10.54□□□□□ -0.72
NFKB1-208ENST00000509165 RGS20O76081 388 aa10.54□□□□□ -0.72
NFKB1-208ENST00000509165 PTPN5P54829 565 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms