RNA–Protein interactions for RNA: ENST00000509090.1

COL6A4P2-204, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

TSL 3

Gene COL6A4P2, Length 455 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-204ENST00000509090 TMEM92Q6UXU6 159 aa13.5□□□□□ -0.25
COL6A4P2-204ENST00000509090 HAP1P54257 671 aaPredicted RBP13.45□□□□□ -0.26
COL6A4P2-204ENST00000509090 CRISPLD2Q9H0B8 497 aa13.45□□□□□ -0.26
COL6A4P2-204ENST00000509090 NCKAP5LQ9HCH0 1330 aa13.44□□□□□ -0.26
COL6A4P2-204ENST00000509090 KIF3CO14782 793 aa13.44□□□□□ -0.26
COL6A4P2-204ENST00000509090 SLAIN1Q8ND83 568 aa13.43□□□□□ -0.26
COL6A4P2-204ENST00000509090 GPHNQ9NQX3 736 aaPredicted RBP13.42□□□□□ -0.26
COL6A4P2-204ENST00000509090 C2orf72A6NCS6 295 aa13.41□□□□□ -0.26
COL6A4P2-204ENST00000509090 PDE4AP27815 886 aa13.41□□□□□ -0.26
COL6A4P2-204ENST00000509090 TMC2Q8TDI7 906 aa13.4□□□□□ -0.26
COL6A4P2-204ENST00000509090 LARP6Q9BRS8 491 aaKnown RBP13.36□□□□□ -0.27
COL6A4P2-204ENST00000509090 FOXK1P85037 733 aa13.35□□□□□ -0.27
COL6A4P2-204ENST00000509090 MFSD10Q14728 455 aa13.35□□□□□ -0.27
COL6A4P2-204ENST00000509090 DSG2Q14126 1118 aa13.33□□□□□ -0.28
COL6A4P2-204ENST00000509090 VSIG10Q8N0Z9 540 aa13.3□□□□□ -0.28
COL6A4P2-204ENST00000509090 DDX27Q96GQ7 796 aaKnown RBP13.3□□□□□ -0.28
COL6A4P2-204ENST00000509090 PPP1R15BQ5SWA1 713 aa13.29□□□□□ -0.28
COL6A4P2-204ENST00000509090 KDM2AQ9Y2K7 1162 aa13.29□□□□□ -0.28
COL6A4P2-204ENST00000509090 PLPP6Q8IY26 295 aa13.28□□□□□ -0.28
COL6A4P2-204ENST00000509090 WDR70Q9NW82 654 aa13.24□□□□□ -0.29
COL6A4P2-204ENST00000509090 SLC24A1O60721 1099 aa13.23□□□□□ -0.29
COL6A4P2-204ENST00000509090 HOXB3P14651 431 aaPredicted RBP13.23□□□□□ -0.29
COL6A4P2-204ENST00000509090 SNPHO15079 494 aa13.22□□□□□ -0.29
COL6A4P2-204ENST00000509090 CAMK2BQ13554 666 aa13.2□□□□□ -0.3
COL6A4P2-204ENST00000509090 SLC34A2O95436 690 aa13.19□□□□□ -0.3
COL6A4P2-204ENST00000509090 DOK7Q18PE1 504 aa13.18□□□□□ -0.3
COL6A4P2-204ENST00000509090 E2F4Q16254 413 aa13.16□□□□□ -0.3
COL6A4P2-204ENST00000509090 PTCD2Q8WV60 388 aaKnown RBP13.14□□□□□ -0.31
COL6A4P2-204ENST00000509090 EMILIN3Q9NT22 766 aa13.14□□□□□ -0.31
COL6A4P2-204ENST00000509090 OXER1Q8TDS5 423 aa13.12□□□□□ -0.31
COL6A4P2-204ENST00000509090 ZSWIM6Q9HCJ5 1215 aa13.12□□□□□ -0.31
COL6A4P2-204ENST00000509090 RIMBP2O15034 1052 aa13.1□□□□□ -0.31
COL6A4P2-204ENST00000509090 GPR153Q6NV75 609 aa13.09□□□□□ -0.31
COL6A4P2-204ENST00000509090 ZNF710Q8N1W2 664 aa13.09□□□□□ -0.31
COL6A4P2-204ENST00000509090 FAM163AQ96GL9 167 aaPredicted RBP13.09□□□□□ -0.31
COL6A4P2-204ENST00000509090 ARIH1Q9Y4X5 557 aaPredicted RBP13.08□□□□□ -0.32
COL6A4P2-204ENST00000509090 PCDHGA4Q9Y5G9 962 aa13.08□□□□□ -0.32
COL6A4P2-204ENST00000509090 ST18O60284 1047 aa13.07□□□□□ -0.32
COL6A4P2-204ENST00000509090 KCNV2Q8TDN2 545 aa13.07□□□□□ -0.32
COL6A4P2-204ENST00000509090 UPF1Q92900 1129 aaKnown RBP eCLIP13.07□□□□□ -0.32
COL6A4P2-204ENST00000509090 LCE2DQ5TA82 110 aaPredicted RBP13.06□□□□□ -0.32
COL6A4P2-204ENST00000509090 TBC1D12O60347 775 aa13.05□□□□□ -0.32
COL6A4P2-204ENST00000509090 HOXB1P14653 301 aaPredicted RBP13.05□□□□□ -0.32
COL6A4P2-204ENST00000509090 ARSIQ5FYB1 569 aa13.05□□□□□ -0.32
COL6A4P2-204ENST00000509090 P3H3Q8IVL6 736 aa13.04□□□□□ -0.32
COL6A4P2-204ENST00000509090 KDM4FA0A1W2PPD8 638 aa13.03□□□□□ -0.32
COL6A4P2-204ENST00000509090 MAP3K9P80192 1104 aa13.02□□□□□ -0.33
COL6A4P2-204ENST00000509090 ARHGEF1Q92888 912 aaKnown RBP13.02□□□□□ -0.33
COL6A4P2-204ENST00000509090 KHSRPQ92945 711 aaKnown RBP eCLIP13.02□□□□□ -0.33
COL6A4P2-204ENST00000509090 DPYSL4O14531 572 aa13.01□□□□□ -0.33
COL6A4P2-204ENST00000509090 NUDT7P0C024 238 aa12.97□□□□□ -0.33
COL6A4P2-204ENST00000509090 ANO8Q9HCE9 1232 aaPredicted RBP12.97□□□□□ -0.33
COL6A4P2-204ENST00000509090 EVI5O60447 810 aa12.96□□□□□ -0.33
COL6A4P2-204ENST00000509090 SPDYE16A6NNV3 312 aaPredicted RBP12.94□□□□□ -0.34
COL6A4P2-204ENST00000509090 PDIA6Q15084 440 aa12.94□□□□□ -0.34
COL6A4P2-204ENST00000509090 MARVELD3Q96A59 401 aa12.92□□□□□ -0.34
COL6A4P2-204ENST00000509090 LHX6Q9UPM6 363 aa12.89□□□□□ -0.35
COL6A4P2-204ENST00000509090 ZNF316A6NFI3 1004 aaPredicted RBP12.88□□□□□ -0.35
COL6A4P2-204ENST00000509090 EMP3P54852 163 aa12.88□□□□□ -0.35
COL6A4P2-204ENST00000509090 PTGER2P43116 358 aa12.87□□□□□ -0.35
COL6A4P2-204ENST00000509090 ERBB3P21860 1342 aa12.84□□□□□ -0.35
COL6A4P2-204ENST00000509090 FAM205CA6NFA0 338 aa12.82□□□□□ -0.36
COL6A4P2-204ENST00000509090 POTEB3A0JP26 581 aa12.81□□□□□ -0.36
COL6A4P2-204ENST00000509090 SEMA3EO15041 775 aa12.81□□□□□ -0.36
COL6A4P2-204ENST00000509090 POTEBQ6S5H4 581 aa12.81□□□□□ -0.36
COL6A4P2-204ENST00000509090 PSDA5PKW4 1024 aaPredicted RBP12.8□□□□□ -0.36
COL6A4P2-204ENST00000509090 FOSBP53539 338 aa12.8□□□□□ -0.36
COL6A4P2-204ENST00000509090 VARS2Q5ST30 1063 aaKnown RBP12.8□□□□□ -0.36
COL6A4P2-204ENST00000509090 JPH4Q96JJ6 628 aa12.79□□□□□ -0.36
COL6A4P2-204ENST00000509090 HS3ST6Q96QI5 342 aa12.79□□□□□ -0.36
COL6A4P2-204ENST00000509090 PHF14O94880 888 aa12.78□□□□□ -0.36
COL6A4P2-204ENST00000509090 POTEGQ6S5H5 508 aa12.78□□□□□ -0.36
COL6A4P2-204ENST00000509090 DDX12PQ92771 950 aa12.78□□□□□ -0.36
COL6A4P2-204ENST00000509090 PCDHGA10Q9Y5H3 936 aa12.78□□□□□ -0.36
COL6A4P2-204ENST00000509090 TESPA1A2RU30 521 aaPredicted RBP12.77□□□□□ -0.37
COL6A4P2-204ENST00000509090 POTEMA6NI47 508 aa12.77□□□□□ -0.37
COL6A4P2-204ENST00000509090 MLLT3P42568 568 aaPredicted RBP12.77□□□□□ -0.37
COL6A4P2-204ENST00000509090 ZNF454Q8N9F8 522 aa12.77□□□□□ -0.37
COL6A4P2-204ENST00000509090 EPAS1Q99814 870 aa12.75□□□□□ -0.37
COL6A4P2-204ENST00000509090 GRXCR2A6NFK2 248 aa12.74□□□□□ -0.37
COL6A4P2-204ENST00000509090 PPP4R3BQ5MIZ7 849 aa12.74□□□□□ -0.37
COL6A4P2-204ENST00000509090 NBR1Q14596 966 aa12.73□□□□□ -0.37
COL6A4P2-204ENST00000509090 TYW1BQ6NUM6 668 aa12.73□□□□□ -0.37
COL6A4P2-204ENST00000509090 ZNF687Q8N1G0 1237 aa12.73□□□□□ -0.37
COL6A4P2-204ENST00000509090 OSBPP22059 807 aa12.72□□□□□ -0.37
COL6A4P2-204ENST00000509090 ZDHHC16Q969W1 377 aa12.72□□□□□ -0.37
COL6A4P2-204ENST00000509090 FBXW7Q969H0 707 aa12.71□□□□□ -0.37
COL6A4P2-204ENST00000509090 PRIM1P49642 420 aaKnown RBP12.69□□□□□ -0.38
COL6A4P2-204ENST00000509090 ADAM33Q9BZ11 813 aa12.69□□□□□ -0.38
COL6A4P2-204ENST00000509090 POTEEQ6S8J3 1075 aa12.68□□□□□ -0.38
COL6A4P2-204ENST00000509090 BCL2L12Q9HB09 334 aa12.68□□□□□ -0.38
COL6A4P2-204ENST00000509090 SMYD5Q6GMV2 418 aa12.67□□□□□ -0.38
COL6A4P2-204ENST00000509090 EN1Q05925 392 aaPredicted RBP12.66□□□□□ -0.38
COL6A4P2-204ENST00000509090 BCANQ96GW7 911 aa12.65□□□□□ -0.38
COL6A4P2-204ENST00000509090 PBX2P40425 430 aa12.63□□□□□ -0.39
COL6A4P2-204ENST00000509090 RBM33Q96EV2 1170 aaKnown RBP12.63□□□□□ -0.39
COL6A4P2-204ENST00000509090 C6orf132Q5T0Z8 1188 aa12.62□□□□□ -0.39
COL6A4P2-204ENST00000509090 CDAN1Q8IWY9 1227 aa12.62□□□□□ -0.39
COL6A4P2-204ENST00000509090 ARHGAP33O14559 1287 aa12.61□□□□□ -0.39
COL6A4P2-204ENST00000509090 MAP3K7O43318 606 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms