RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 HOXB3P14651 431 aaPredicted RBP13.22□□□□□ -0.29
UBE2D3-225ENST00000508476 SNPHO15079 494 aa13.2□□□□□ -0.3
UBE2D3-225ENST00000508476 TMC2Q8TDI7 906 aa13.18□□□□□ -0.3
UBE2D3-225ENST00000508476 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.18□□□□□ -0.3
UBE2D3-225ENST00000508476 PAXIP1Q6ZW49 1069 aaPredicted RBP13.16□□□□□ -0.3
UBE2D3-225ENST00000508476 SPRYD3Q8NCJ5 442 aa13.16□□□□□ -0.3
UBE2D3-225ENST00000508476 CFAP44Q96MT7 982 aa13.15□□□□□ -0.3
UBE2D3-225ENST00000508476 CADPS2Q86UW7 1296 aa13.14□□□□□ -0.31
UBE2D3-225ENST00000508476 POTEMA6NI47 508 aa13.13□□□□□ -0.31
UBE2D3-225ENST00000508476 POTEGQ6S5H5 508 aa13.12□□□□□ -0.31
UBE2D3-225ENST00000508476 GPHNQ9NQX3 736 aaPredicted RBP13.12□□□□□ -0.31
UBE2D3-225ENST00000508476 NCKAP5LQ9HCH0 1330 aa13.12□□□□□ -0.31
UBE2D3-225ENST00000508476 DOK7Q18PE1 504 aa13.11□□□□□ -0.31
UBE2D3-225ENST00000508476 MARVELD3Q96A59 401 aa13.1□□□□□ -0.31
UBE2D3-225ENST00000508476 CRISPLD2Q9H0B8 497 aa13.1□□□□□ -0.31
UBE2D3-225ENST00000508476 DSG2Q14126 1118 aa13.09□□□□□ -0.31
UBE2D3-225ENST00000508476 ZNF710Q8N1W2 664 aa13.09□□□□□ -0.31
UBE2D3-225ENST00000508476 FOXK1P85037 733 aa13.06□□□□□ -0.32
UBE2D3-225ENST00000508476 PLPP6Q8IY26 295 aa13.05□□□□□ -0.32
UBE2D3-225ENST00000508476 KHSRPQ92945 711 aaKnown RBP eCLIP13.03□□□□□ -0.323e-7■■■□□ 19
UBE2D3-225ENST00000508476 RIMBP2O15034 1052 aa13.02□□□□□ -0.33
UBE2D3-225ENST00000508476 HOXB1P14653 301 aaPredicted RBP13.02□□□□□ -0.33
UBE2D3-225ENST00000508476 PDE4AP27815 886 aa13.02□□□□□ -0.33
UBE2D3-225ENST00000508476 GPR153Q6NV75 609 aa13.02□□□□□ -0.33
UBE2D3-225ENST00000508476 LARP6Q9BRS8 491 aaKnown RBP13.02□□□□□ -0.33
UBE2D3-225ENST00000508476 ARSIQ5FYB1 569 aa13.01□□□□□ -0.33
UBE2D3-225ENST00000508476 EMP3P54852 163 aa13□□□□□ -0.33
UBE2D3-225ENST00000508476 PPP1R15BQ5SWA1 713 aa13□□□□□ -0.33
UBE2D3-225ENST00000508476 ZSWIM6Q9HCJ5 1215 aa12.98□□□□□ -0.33
UBE2D3-225ENST00000508476 POTEB3A0JP26 581 aa12.96□□□□□ -0.33
UBE2D3-225ENST00000508476 SLC34A2O95436 690 aa12.96□□□□□ -0.33
UBE2D3-225ENST00000508476 POTEBQ6S5H4 581 aa12.96□□□□□ -0.33
UBE2D3-225ENST00000508476 MFSD10Q14728 455 aa12.95□□□□□ -0.34
UBE2D3-225ENST00000508476 DDX27Q96GQ7 796 aaKnown RBP12.95□□□□□ -0.34
UBE2D3-225ENST00000508476 PCDHGA4Q9Y5G9 962 aa12.95□□□□□ -0.34
UBE2D3-225ENST00000508476 FAM205CA6NFA0 338 aa12.94□□□□□ -0.34
UBE2D3-225ENST00000508476 TSHZ2Q9NRE2 1034 aa12.92□□□□□ -0.34
UBE2D3-225ENST00000508476 NUDT7P0C024 238 aa12.91□□□□□ -0.34
UBE2D3-225ENST00000508476 PTCD2Q8WV60 388 aaKnown RBP12.91□□□□□ -0.34
UBE2D3-225ENST00000508476 UPF1Q92900 1129 aaKnown RBP eCLIP12.9□□□□□ -0.34
UBE2D3-225ENST00000508476 HS3ST6Q96QI5 342 aa12.9□□□□□ -0.34
UBE2D3-225ENST00000508476 ERBB3P21860 1342 aa12.88□□□□□ -0.35
UBE2D3-225ENST00000508476 CDAN1Q8IWY9 1227 aa12.87□□□□□ -0.35
UBE2D3-225ENST00000508476 OXER1Q8TDS5 423 aa12.87□□□□□ -0.35
UBE2D3-225ENST00000508476 PLCB2Q00722 1185 aa12.86□□□□□ -0.35
UBE2D3-225ENST00000508476 VARS2Q5ST30 1063 aaKnown RBP12.85□□□□□ -0.35
UBE2D3-225ENST00000508476 EMILIN3Q9NT22 766 aa12.85□□□□□ -0.35
UBE2D3-225ENST00000508476 KDM4FA0A1W2PPD8 638 aa12.84□□□□□ -0.35
UBE2D3-225ENST00000508476 ZNF316A6NFI3 1004 aaPredicted RBP12.83□□□□□ -0.36
UBE2D3-225ENST00000508476 LHX6Q9UPM6 363 aa12.82□□□□□ -0.36
UBE2D3-225ENST00000508476 TBC1D12O60347 775 aa12.79□□□□□ -0.36
UBE2D3-225ENST00000508476 CAMK2BQ13554 666 aa12.78□□□□□ -0.36
UBE2D3-225ENST00000508476 PCDH10Q9P2E7 1040 aa12.77□□□□□ -0.37
UBE2D3-225ENST00000508476 KRTAP3-3Q9BYR6 98 aa12.74□□□□□ -0.37
UBE2D3-225ENST00000508476 KRTAP3-2Q9BYR7 98 aa12.74□□□□□ -0.37
UBE2D3-225ENST00000508476 MAP3K9P80192 1104 aa12.73□□□□□ -0.37
UBE2D3-225ENST00000508476 WDR70Q9NW82 654 aa12.73□□□□□ -0.37
UBE2D3-225ENST00000508476 DPYSL4O14531 572 aa12.72□□□□□ -0.37
UBE2D3-225ENST00000508476 EVI5O60447 810 aa12.72□□□□□ -0.37
UBE2D3-225ENST00000508476 ZNF687Q8N1G0 1237 aa12.71□□□□□ -0.37
UBE2D3-225ENST00000508476 E2F4Q16254 413 aa12.7□□□□□ -0.38
UBE2D3-225ENST00000508476 HAP1P54257 671 aaPredicted RBP12.69□□□□□ -0.38
UBE2D3-225ENST00000508476 ANO8Q9HCE9 1232 aaPredicted RBP12.67□□□□□ -0.38
UBE2D3-225ENST00000508476 POTEEQ6S8J3 1075 aa12.66□□□□□ -0.38
UBE2D3-225ENST00000508476 AXIN2Q9Y2T1 843 aa12.64□□□□□ -0.39
UBE2D3-225ENST00000508476 ZNF454Q8N9F8 522 aa12.63□□□□□ -0.39
UBE2D3-225ENST00000508476 PSDA5PKW4 1024 aaPredicted RBP12.62□□□□□ -0.39
UBE2D3-225ENST00000508476 FOSBP53539 338 aa12.61□□□□□ -0.39
UBE2D3-225ENST00000508476 PLSCR2Q9NRY7 297 aa12.61□□□□□ -0.39
UBE2D3-225ENST00000508476 PPP4R3BQ5MIZ7 849 aa12.6□□□□□ -0.39
UBE2D3-225ENST00000508476 KCNV2Q8TDN2 545 aa12.58□□□□□ -0.4
UBE2D3-225ENST00000508476 JPH4Q96JJ6 628 aa12.58□□□□□ -0.4
UBE2D3-225ENST00000508476 PDIA6Q15084 440 aa12.57□□□□□ -0.4
UBE2D3-225ENST00000508476 KDM2AQ9Y2K7 1162 aa12.57□□□□□ -0.4
UBE2D3-225ENST00000508476 PSEN2P49810 448 aa12.56□□□□□ -0.4
UBE2D3-225ENST00000508476 SPNS2Q8IVW8 549 aa12.56□□□□□ -0.4
UBE2D3-225ENST00000508476 ARIH1Q9Y4X5 557 aaPredicted RBP12.56□□□□□ -0.4
UBE2D3-225ENST00000508476 PCDHGA10Q9Y5H3 936 aa12.56□□□□□ -0.4
UBE2D3-225ENST00000508476 PBX2P40425 430 aa12.54□□□□□ -0.4
UBE2D3-225ENST00000508476 DDX12PQ92771 950 aa12.54□□□□□ -0.4
UBE2D3-225ENST00000508476 ARHGAP33O14559 1287 aa12.53□□□□□ -0.4
UBE2D3-225ENST00000508476 LSM11P83369 360 aaKnown RBP eCLIP12.53□□□□□ -0.4
UBE2D3-225ENST00000508476 ANKRD13DQ6ZTN6 518 aa12.53□□□□□ -0.4
UBE2D3-225ENST00000508476 ADAM33Q9BZ11 813 aa12.53□□□□□ -0.4
UBE2D3-225ENST00000508476 DMRTA1Q5VZB9 504 aa12.52□□□□□ -0.41
UBE2D3-225ENST00000508476 ZDHHC16Q969W1 377 aa12.52□□□□□ -0.41
UBE2D3-225ENST00000508476 KCNK17Q96T54 332 aa12.52□□□□□ -0.41
UBE2D3-225ENST00000508476 SPDYE16A6NNV3 312 aaPredicted RBP12.51□□□□□ -0.41
UBE2D3-225ENST00000508476 BCL2L12Q9HB09 334 aa12.5□□□□□ -0.41
UBE2D3-225ENST00000508476 PHF14O94880 888 aa12.49□□□□□ -0.41
UBE2D3-225ENST00000508476 PTGER2P43116 358 aa12.49□□□□□ -0.41
UBE2D3-225ENST00000508476 TYW1BQ6NUM6 668 aa12.47□□□□□ -0.41
UBE2D3-225ENST00000508476 ARHGEF1Q92888 912 aaKnown RBP12.47□□□□□ -0.41
UBE2D3-225ENST00000508476 MMRN1Q13201 1228 aa12.45□□□□□ -0.42
UBE2D3-225ENST00000508476 RBM33Q96EV2 1170 aaKnown RBP12.45□□□□□ -0.42
UBE2D3-225ENST00000508476 GRXCR2A6NFK2 248 aa12.44□□□□□ -0.42
UBE2D3-225ENST00000508476 PTPREP23469 700 aa12.44□□□□□ -0.42
UBE2D3-225ENST00000508476 PRIM1P49642 420 aaKnown RBP12.44□□□□□ -0.42
UBE2D3-225ENST00000508476 NBR1Q14596 966 aa12.44□□□□□ -0.42
UBE2D3-225ENST00000508476 FBXW7Q969H0 707 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms