RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 FHAD1B1AJZ9 1412 aa9.24□□□□□ -0.93
UBE2D3-224ENST00000508474 CSPP1Q1MSJ5 1256 aa9.24□□□□□ -0.93
UBE2D3-224ENST00000508474 ARID3AQ99856 593 aa9.23□□□□□ -0.93
UBE2D3-224ENST00000508474 CENPQQ7L2Z9 268 aaPredicted RBP9.23□□□□□ -0.93
UBE2D3-224ENST00000508474 FAM43AQ8N2R8 423 aa9.23□□□□□ -0.93
UBE2D3-224ENST00000508474 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.23□□□□□ -0.93
UBE2D3-224ENST00000508474 PHF14O94880 888 aa9.22□□□□□ -0.93
UBE2D3-224ENST00000508474 KIF27Q86VH2 1401 aa9.22□□□□□ -0.93
UBE2D3-224ENST00000508474 PHLDB1Q86UU1 1377 aa9.22□□□□□ -0.93
UBE2D3-224ENST00000508474 TPM2P07951 284 aa9.21□□□□□ -0.93
UBE2D3-224ENST00000508474 RAB3GAP2Q9H2M9 1393 aa9.21□□□□□ -0.93
UBE2D3-224ENST00000508474 TMF1P82094 1093 aa9.21□□□□□ -0.94
UBE2D3-224ENST00000508474 TPRNQ4KMQ1 711 aa9.21□□□□□ -0.94
UBE2D3-224ENST00000508474 FBLN2P98095 1184 aa9.21□□□□□ -0.94
UBE2D3-224ENST00000508474 CC2D1BQ5T0F9 858 aaKnown RBP9.2□□□□□ -0.94
UBE2D3-224ENST00000508474 ROCK2O75116 1388 aaKnown RBP9.2□□□□□ -0.94
UBE2D3-224ENST00000508474 IPO8O15397 1037 aaKnown RBP9.19□□□□□ -0.94
UBE2D3-224ENST00000508474 NEUROD2Q15784 382 aa9.19□□□□□ -0.94
UBE2D3-224ENST00000508474 DHX57Q6P158 1386 aaKnown RBP9.19□□□□□ -0.94
UBE2D3-224ENST00000508474 HTATSF1O43719 755 aaKnown RBP9.19□□□□□ -0.94
UBE2D3-224ENST00000508474 NFKBIBQ15653 356 aa9.17□□□□□ -0.94
UBE2D3-224ENST00000508474 ZNF771Q7L3S4 317 aaPredicted RBP9.17□□□□□ -0.94
UBE2D3-224ENST00000508474 GOLGA6L1Q8N7Z2 621 aa9.17□□□□□ -0.94
UBE2D3-224ENST00000508474 PODXL2Q9NZ53 605 aa9.17□□□□□ -0.94
UBE2D3-224ENST00000508474 HAP1P54257 671 aaPredicted RBP9.17□□□□□ -0.94
UBE2D3-224ENST00000508474 RRP1P56182 461 aaKnown RBP9.17□□□□□ -0.94
UBE2D3-224ENST00000508474 MRE11P49959 708 aa9.16□□□□□ -0.94
UBE2D3-224ENST00000508474 MFAP1P55081 439 aaKnown RBP9.16□□□□□ -0.94
UBE2D3-224ENST00000508474 ARHGAP35Q9NRY4 1499 aa9.16□□□□□ -0.94
UBE2D3-224ENST00000508474 RRP9O43818 475 aaKnown RBP9.16□□□□□ -0.94
UBE2D3-224ENST00000508474 STAG3Q9UJ98 1225 aa9.16□□□□□ -0.94
UBE2D3-224ENST00000508474 KCNH8Q96L42 1107 aa9.16□□□□□ -0.94
UBE2D3-224ENST00000508474 FAM13BQ9NYF5 915 aa9.15□□□□□ -0.94
UBE2D3-224ENST00000508474 RGL3Q3MIN7 710 aa9.15□□□□□ -0.94
UBE2D3-224ENST00000508474 CHMP5Q9NZZ3 219 aa9.15□□□□□ -0.94
UBE2D3-224ENST00000508474 GOLGA2Q08379 1002 aa9.15□□□□□ -0.94
UBE2D3-224ENST00000508474 NLRP13Q86W25 1043 aa9.15□□□□□ -0.94
UBE2D3-224ENST00000508474 TPM4P67936 248 aa9.15□□□□□ -0.95
UBE2D3-224ENST00000508474 SETQ01105 290 aaPredicted RBP9.14□□□□□ -0.95
UBE2D3-224ENST00000508474 DDX49Q9Y6V7 483 aaKnown RBP9.14□□□□□ -0.95
UBE2D3-224ENST00000508474 KCNJ4P48050 445 aa9.14□□□□□ -0.95
UBE2D3-224ENST00000508474 IL27Q8NEV9 243 aa9.14□□□□□ -0.95
UBE2D3-224ENST00000508474 SOGA1O94964 1423 aa9.13□□□□□ -0.95
UBE2D3-224ENST00000508474 ZBTB7CA1YPR0 619 aa9.13□□□□□ -0.95
UBE2D3-224ENST00000508474 UBE2Q2Q8WVN8 375 aa9.13□□□□□ -0.95
UBE2D3-224ENST00000508474 FGD1P98174 961 aa9.13□□□□□ -0.95
UBE2D3-224ENST00000508474 SLC4A3P48751 1232 aa9.13□□□□□ -0.95
UBE2D3-224ENST00000508474 KIF15Q9NS87 1388 aa9.12□□□□□ -0.95
UBE2D3-224ENST00000508474 ST18O60284 1047 aa9.12□□□□□ -0.95
UBE2D3-224ENST00000508474 EXOC6Q8TAG9 804 aa9.12□□□□□ -0.95
UBE2D3-224ENST00000508474 PRKRIP1Q9H875 184 aaPredicted RBP9.12□□□□□ -0.95
UBE2D3-224ENST00000508474 CFDP1Q9UEE9 299 aaPredicted RBP9.12□□□□□ -0.95
UBE2D3-224ENST00000508474 ISY1Q9ULR0 285 aaKnown RBP9.12□□□□□ -0.95
UBE2D3-224ENST00000508474 KIF16BQ96L93 1317 aa9.12□□□□□ -0.95
UBE2D3-224ENST00000508474 FMN1Q68DA7 1419 aa9.11□□□□□ -0.95
UBE2D3-224ENST00000508474 TEX35Q5T0J7 233 aa9.11□□□□□ -0.95
UBE2D3-224ENST00000508474 MYBBP1AQ9BQG0 1328 aaKnown RBP9.11□□□□□ -0.95
UBE2D3-224ENST00000508474 BRPF3Q9ULD4 1205 aa9.11□□□□□ -0.95
UBE2D3-224ENST00000508474 BAZ1BQ9UIG0 1483 aaKnown RBP9.11□□□□□ -0.95
UBE2D3-224ENST00000508474 GPS2Q13227 327 aa9.11□□□□□ -0.95
UBE2D3-224ENST00000508474 CGNL1Q0VF96 1302 aa9.1□□□□□ -0.95
UBE2D3-224ENST00000508474 CCDC66A2RUB6 948 aa9.1□□□□□ -0.95
UBE2D3-224ENST00000508474 CENPJQ9HC77 1338 aaPredicted RBP9.1□□□□□ -0.95
UBE2D3-224ENST00000508474 KIAA1211Q6ZU35 1233 aa9.1□□□□□ -0.95
UBE2D3-224ENST00000508474 ITPRIPQ8IWB1 547 aa9.09□□□□□ -0.95
UBE2D3-224ENST00000508474 DCAF11Q8TEB1 546 aa9.09□□□□□ -0.95
UBE2D3-224ENST00000508474 KANK4Q5T7N3 995 aaPredicted RBP9.09□□□□□ -0.95
UBE2D3-224ENST00000508474 A0A0U1RQG5 324 aaPredicted RBP9.08□□□□□ -0.96
UBE2D3-224ENST00000508474 PLEKHD1A6NEE1 506 aa9.08□□□□□ -0.96
UBE2D3-224ENST00000508474 OS9Q13438 667 aaPredicted RBP9.08□□□□□ -0.96
UBE2D3-224ENST00000508474 DIAPH3Q9NSV4 1193 aa9.08□□□□□ -0.96
UBE2D3-224ENST00000508474 CCDC39Q9UFE4 941 aa9.08□□□□□ -0.96
UBE2D3-224ENST00000508474 U2SURPO15042 1029 aaKnown RBP9.07□□□□□ -0.96
UBE2D3-224ENST00000508474 NOM1Q5C9Z4 860 aaKnown RBP9.07□□□□□ -0.96
UBE2D3-224ENST00000508474 MORC1Q86VD1 984 aa9.07□□□□□ -0.96
UBE2D3-224ENST00000508474 ESF1Q9H501 851 aaKnown RBP9.07□□□□□ -0.96
UBE2D3-224ENST00000508474 ATP6V1DQ9Y5K8 247 aa9.07□□□□□ -0.96
UBE2D3-224ENST00000508474 AAMPQ13685 434 aa9.07□□□□□ -0.96
UBE2D3-224ENST00000508474 CRBNQ96SW2 442 aa9.07□□□□□ -0.96
UBE2D3-224ENST00000508474 BAZ1AQ9NRL2 1556 aaPredicted RBP9.07□□□□□ -0.96
UBE2D3-224ENST00000508474 EIF3AQ14152 1382 aaKnown RBP9.07□□□□□ -0.96
UBE2D3-224ENST00000508474 HMGN5P82970 282 aaKnown RBP9.06□□□□□ -0.96
UBE2D3-224ENST00000508474 MPHOSPH9Q99550 1183 aa9.06□□□□□ -0.96
UBE2D3-224ENST00000508474 CCDC173Q0VFZ6 552 aa9.06□□□□□ -0.96
UBE2D3-224ENST00000508474 TPM3P06753 285 aa9.06□□□□□ -0.96
UBE2D3-224ENST00000508474 NGEFQ8N5V2 710 aa9.06□□□□□ -0.96
UBE2D3-224ENST00000508474 R3HCC1Q9Y3T6 440 aaKnown RBP9.06□□□□□ -0.96
UBE2D3-224ENST00000508474 TAF3Q5VWG9 929 aa9.05□□□□□ -0.96
UBE2D3-224ENST00000508474 NUCB2P80303 420 aa9.05□□□□□ -0.96
UBE2D3-224ENST00000508474 PAK3O75914 559 aaPredicted RBP9.05□□□□□ -0.96
UBE2D3-224ENST00000508474 NASPP49321 788 aaPredicted RBP9.05□□□□□ -0.96
UBE2D3-224ENST00000508474 FOXD4L1Q9NU39 408 aa9.04□□□□□ -0.96
UBE2D3-224ENST00000508474 CCDC34Q96HJ3 373 aa9.04□□□□□ -0.96
UBE2D3-224ENST00000508474 HMMRO75330 724 aa9.03□□□□□ -0.96
UBE2D3-224ENST00000508474 CALRP27797 417 aaKnown RBP9.03□□□□□ -0.96
UBE2D3-224ENST00000508474 L3MBTL2Q969R5 705 aa9.03□□□□□ -0.96
UBE2D3-224ENST00000508474 E9PSI1 815 aa9.03□□□□□ -0.96
UBE2D3-224ENST00000508474 SMC4Q9NTJ3 1288 aa9.03□□□□□ -0.96
UBE2D3-224ENST00000508474 CWC15Q9P013 229 aaKnown RBP9.03□□□□□ -0.96
UBE2D3-224ENST00000508474 NAP1L2Q9ULW6 460 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms