RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, human

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMN2-208	ENST00000508258	HAP1	P54257	671 aa	Predicted RBP	4.29	□□□□□ -1.72
SMN2-208	ENST00000508258	EMP3	P54852	163 aa		4.29	□□□□□ -1.72
SMN2-208	ENST00000508258	DOK7	Q18PE1	504 aa		4.29	□□□□□ -1.72
SMN2-208	ENST00000508258	VSIG10	Q8N0Z9	540 aa		4.28	□□□□□ -1.72
SMN2-208	ENST00000508258	TMC2	Q8TDI7	906 aa		4.28	□□□□□ -1.72
SMN2-208	ENST00000508258	BBX	Q8WY36	941 aa	Predicted RBP	4.28	□□□□□ -1.72
SMN2-208	ENST00000508258	PPP1R37	O75864	691 aa		4.27	□□□□□ -1.73
SMN2-208	ENST00000508258	TMEM92	Q6UXU6	159 aa		4.27	□□□□□ -1.73
SMN2-208	ENST00000508258	FAM205C	A6NFA0	338 aa		4.26	□□□□□ -1.73
SMN2-208	ENST00000508258	CDAN1	Q8IWY9	1227 aa		4.26	□□□□□ -1.73
SMN2-208	ENST00000508258	RYDEN	Q9NUL5	291 aa	Known RBP	4.26	□□□□□ -1.73
SMN2-208	ENST00000508258	PCDH10	Q9P2E7	1040 aa		4.26	□□□□□ -1.73
SMN2-208	ENST00000508258	C2orf72	A6NCS6	295 aa		4.25	□□□□□ -1.73
SMN2-208	ENST00000508258	HOXB3	P14651	431 aa	Predicted RBP	4.25	□□□□□ -1.73
SMN2-208	ENST00000508258	NKX1-1	Q15270	411 aa	Predicted RBP	4.24	□□□□□ -1.73
SMN2-208	ENST00000508258	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	4.24	□□□□□ -1.73
SMN2-208	ENST00000508258	ERBB3	P21860	1342 aa		4.23	□□□□□ -1.73
SMN2-208	ENST00000508258	HOXB1	P14653	301 aa	Predicted RBP	4.23	□□□□□ -1.73
SMN2-208	ENST00000508258	BCAN	Q96GW7	911 aa		4.23	□□□□□ -1.73
SMN2-208	ENST00000508258	HS3ST6	Q96QI5	342 aa		4.23	□□□□□ -1.73
SMN2-208	ENST00000508258	KDM2A	Q9Y2K7	1162 aa		4.23	□□□□□ -1.73
SMN2-208	ENST00000508258	ARSI	Q5FYB1	569 aa		4.22	□□□□□ -1.73
SMN2-208	ENST00000508258	VARS2	Q5ST30	1063 aa	Known RBP	4.21	□□□□□ -1.74
SMN2-208	ENST00000508258	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	4.21	□□□□□ -1.74
SMN2-208	ENST00000508258	ZSWIM6	Q9HCJ5	1215 aa		4.21	□□□□□ -1.74
SMN2-208	ENST00000508258	KIF3C	O14782	793 aa		4.2	□□□□□ -1.74
SMN2-208	ENST00000508258	SPRYD3	Q8NCJ5	442 aa		4.2	□□□□□ -1.74
SMN2-208	ENST00000508258	KHSRP	Q92945	711 aa	Known RBP eCLIP	4.2	□□□□□ -1.74
SMN2-208	ENST00000508258	CFAP44	Q96MT7	982 aa		4.2	□□□□□ -1.74
SMN2-208	ENST00000508258	DNAJC5	Q9H3Z4	198 aa		4.2	□□□□□ -1.74
SMN2-208	ENST00000508258	GTPBP6	O43824	516 aa	Predicted RBP	4.19	□□□□□ -1.74
SMN2-208	ENST00000508258	NUDT7	P0C024	238 aa		4.19	□□□□□ -1.74
SMN2-208	ENST00000508258	GPR153	Q6NV75	609 aa		4.19	□□□□□ -1.74
SMN2-208	ENST00000508258	PLPP6	Q8IY26	295 aa		4.19	□□□□□ -1.74
SMN2-208	ENST00000508258	POTEB3	A0JP26	581 aa		4.18	□□□□□ -1.74
SMN2-208	ENST00000508258	DSG2	Q14126	1118 aa		4.18	□□□□□ -1.74
SMN2-208	ENST00000508258	POTEB	Q6S5H4	581 aa		4.18	□□□□□ -1.74
SMN2-208	ENST00000508258	GPHN	Q9NQX3	736 aa	Predicted RBP	4.18	□□□□□ -1.74
SMN2-208	ENST00000508258	PCDHGA4	Q9Y5G9	962 aa		4.18	□□□□□ -1.74
SMN2-208	ENST00000508258	PDE4A	P27815	886 aa		4.17	□□□□□ -1.74
SMN2-208	ENST00000508258	FOXK1	P85037	733 aa		4.17	□□□□□ -1.74
SMN2-208	ENST00000508258	UPF1	Q92900	1129 aa	Known RBP eCLIP	4.17	□□□□□ -1.74
SMN2-208	ENST00000508258	TSHZ2	Q9NRE2	1034 aa		4.17	□□□□□ -1.74
SMN2-208	ENST00000508258	ZNF316	A6NFI3	1004 aa	Predicted RBP	4.16	□□□□□ -1.74
SMN2-208	ENST00000508258	TBC1D12	O60347	775 aa		4.16	□□□□□ -1.74
SMN2-208	ENST00000508258	PRKCSH	P14314	528 aa	Predicted RBP	4.16	□□□□□ -1.74
SMN2-208	ENST00000508258	PPP1R15B	Q5SWA1	713 aa		4.16	□□□□□ -1.74
SMN2-208	ENST00000508258	LARP6	Q9BRS8	491 aa	Known RBP	4.16	□□□□□ -1.74
SMN2-208	ENST00000508258	SLC34A2	O95436	690 aa		4.15	□□□□□ -1.75
SMN2-208	ENST00000508258	LHX6	Q9UPM6	363 aa		4.15	□□□□□ -1.75
SMN2-208	ENST00000508258	SPNS2	Q8IVW8	549 aa		4.14	□□□□□ -1.75
SMN2-208	ENST00000508258	DDX27	Q96GQ7	796 aa	Known RBP	4.14	□□□□□ -1.75
SMN2-208	ENST00000508258	KRTAP3-3	Q9BYR6	98 aa		4.14	□□□□□ -1.75
SMN2-208	ENST00000508258	KRTAP3-2	Q9BYR7	98 aa		4.14	□□□□□ -1.75
SMN2-208	ENST00000508258	CRISPLD2	Q9H0B8	497 aa		4.14	□□□□□ -1.75
SMN2-208	ENST00000508258	NCKAP5L	Q9HCH0	1330 aa		4.14	□□□□□ -1.75
SMN2-208	ENST00000508258	ANKRD13D	Q6ZTN6	518 aa		4.13	□□□□□ -1.75
SMN2-208	ENST00000508258	ZNF687	Q8N1G0	1237 aa		4.13	□□□□□ -1.75
SMN2-208	ENST00000508258	PTCD2	Q8WV60	388 aa	Known RBP	4.13	□□□□□ -1.75
SMN2-208	ENST00000508258	MMRN1	Q13201	1228 aa		4.12	□□□□□ -1.75
SMN2-208	ENST00000508258	CADPS2	Q86UW7	1296 aa		4.12	□□□□□ -1.75
SMN2-208	ENST00000508258	AXIN2	Q9Y2T1	843 aa		4.12	□□□□□ -1.75
SMN2-208	ENST00000508258	PSD	A5PKW4	1024 aa	Predicted RBP	4.11	□□□□□ -1.75
SMN2-208	ENST00000508258	MAP3K9	P80192	1104 aa		4.11	□□□□□ -1.75
SMN2-208	ENST00000508258	PBX2	P40425	430 aa		4.1	□□□□□ -1.75
SMN2-208	ENST00000508258	PPP4R3B	Q5MIZ7	849 aa		4.1	□□□□□ -1.75
SMN2-208	ENST00000508258	ZNF454	Q8N9F8	522 aa		4.1	□□□□□ -1.75
SMN2-208	ENST00000508258	OXER1	Q8TDS5	423 aa		4.1	□□□□□ -1.75
SMN2-208	ENST00000508258	KCNH8	Q96L42	1107 aa		4.1	□□□□□ -1.75
SMN2-208	ENST00000508258	EVI5	O60447	810 aa		4.09	□□□□□ -1.75
SMN2-208	ENST00000508258	LSM11	P83369	360 aa	Known RBP eCLIP	4.09	□□□□□ -1.75
SMN2-208	ENST00000508258	TPRN	Q4KMQ1	711 aa		4.09	□□□□□ -1.75
SMN2-208	ENST00000508258	PSEN2	P49810	448 aa		4.08	□□□□□ -1.76
SMN2-208	ENST00000508258	MFSD10	Q14728	455 aa		4.08	□□□□□ -1.76
SMN2-208	ENST00000508258	KCNK17	Q96T54	332 aa		4.08	□□□□□ -1.76
SMN2-208	ENST00000508258	WDR70	Q9NW82	654 aa		4.08	□□□□□ -1.76
SMN2-208	ENST00000508258	MYT1L	Q9UL68	1186 aa		4.08	□□□□□ -1.76
SMN2-208	ENST00000508258	ARHGAP33	O14559	1287 aa		4.07	□□□□□ -1.76
SMN2-208	ENST00000508258	RNF166	Q96A37	237 aa	Predicted RBP	4.07	□□□□□ -1.76
SMN2-208	ENST00000508258	STAC3	Q96MF2	364 aa		4.07	□□□□□ -1.76
SMN2-208	ENST00000508258	EMILIN3	Q9NT22	766 aa		4.07	□□□□□ -1.76
SMN2-208	ENST00000508258	KDM4F	A0A1W2PPD8	638 aa		4.06	□□□□□ -1.76
SMN2-208	ENST00000508258	DPYSL4	O14531	572 aa		4.05	□□□□□ -1.76
SMN2-208	ENST00000508258	PTGER2	P43116	358 aa		4.05	□□□□□ -1.76
SMN2-208	ENST00000508258	POTEE	Q6S8J3	1075 aa		4.05	□□□□□ -1.76
SMN2-208	ENST00000508258	PTPRE	P23469	700 aa		4.04	□□□□□ -1.76
SMN2-208	ENST00000508258	FOSB	P53539	338 aa		4.04	□□□□□ -1.76
SMN2-208	ENST00000508258	DMRTA1	Q5VZB9	504 aa		4.04	□□□□□ -1.76
SMN2-208	ENST00000508258	ADGRD1	Q6QNK2	874 aa		4.04	□□□□□ -1.76
SMN2-208	ENST00000508258	ZDHHC16	Q969W1	377 aa		4.04	□□□□□ -1.76
SMN2-208	ENST00000508258	JPH4	Q96JJ6	628 aa		4.04	□□□□□ -1.76
SMN2-208	ENST00000508258	NBR1	Q14596	966 aa		4.03	□□□□□ -1.76
SMN2-208	ENST00000508258	E2F4	Q16254	413 aa		4.02	□□□□□ -1.77
SMN2-208	ENST00000508258	DDX12P	Q92771	950 aa		4.02	□□□□□ -1.77
SMN2-208	ENST00000508258	RBM33	Q96EV2	1170 aa	Known RBP	4.02	□□□□□ -1.77
SMN2-208	ENST00000508258	ADAM33	Q9BZ11	813 aa		4.02	□□□□□ -1.77
SMN2-208	ENST00000508258	BCL2L12	Q9HB09	334 aa		4.02	□□□□□ -1.77
SMN2-208	ENST00000508258	ANO8	Q9HCE9	1232 aa	Predicted RBP	4.02	□□□□□ -1.77
SMN2-208	ENST00000508258	PCDHGA10	Q9Y5H3	936 aa		4.02	□□□□□ -1.77
SMN2-208	ENST00000508258	GOLGA8CP	A6NN73	597 aa		4.01	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms