RNA–Protein interactions for RNA: ENST00000507689.1

COL1A1-211, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-211ENST00000507689 MYT1LQ9UL68 1186 aa24.67■■□□□ 1.54
COL1A1-211ENST00000507689 CCNB3Q8WWL7 1395 aa24.67■■□□□ 1.54
COL1A1-211ENST00000507689 ARID4BQ4LE39 1312 aaPredicted RBP24.64■■□□□ 1.54
COL1A1-211ENST00000507689 KDM4FA0A1W2PPD8 638 aa24.64■■□□□ 1.54
COL1A1-211ENST00000507689 ZNF777Q9ULD5 760 aaPredicted RBP24.64■■□□□ 1.54
COL1A1-211ENST00000507689 EHBP1L1Q8N3D4 1523 aa24.64■■□□□ 1.53
COL1A1-211ENST00000507689 PREX2Q70Z35 1606 aa24.63■■□□□ 1.53
COL1A1-211ENST00000507689 FRMPD1Q5SYB0 1578 aa24.63■■□□□ 1.53
COL1A1-211ENST00000507689 POGZQ7Z3K3 1410 aa24.62■■□□□ 1.53
COL1A1-211ENST00000507689 RICTORQ6R327 1708 aa24.62■■□□□ 1.53
COL1A1-211ENST00000507689 CFDP1Q9UEE9 299 aaPredicted RBP24.61■■□□□ 1.53
COL1A1-211ENST00000507689 MAGI2Q86UL8 1455 aa24.61■■□□□ 1.53
COL1A1-211ENST00000507689 ZNF518AQ6AHZ1 1483 aa24.59■■□□□ 1.53
COL1A1-211ENST00000507689 CDC42BPBQ9Y5S2 1711 aa24.58■■□□□ 1.53
COL1A1-211ENST00000507689 ZMYM4Q5VZL5 1548 aa24.58■■□□□ 1.53
COL1A1-211ENST00000507689 ZFYVE16Q7Z3T8 1539 aa24.57■■□□□ 1.52
COL1A1-211ENST00000507689 GPATCH8Q9UKJ3 1502 aaKnown RBP24.56■■□□□ 1.52
COL1A1-211ENST00000507689 CDC42BPAQ5VT25 1732 aa24.56■■□□□ 1.52
COL1A1-211ENST00000507689 TIAM1Q13009 1591 aa24.56■■□□□ 1.52
COL1A1-211ENST00000507689 ARHGEF40Q8TER5 1519 aa24.56■■□□□ 1.52
COL1A1-211ENST00000507689 AFAP1Q8N556 730 aa24.53■■□□□ 1.52
COL1A1-211ENST00000507689 PLEKHH2Q8IVE3 1493 aa24.52■■□□□ 1.52
COL1A1-211ENST00000507689 SUPT6HQ7KZ85 1726 aaKnown RBP24.52■■□□□ 1.52
COL1A1-211ENST00000507689 ABCC1P33527 1531 aa24.51■■□□□ 1.51
COL1A1-211ENST00000507689 ITSN2Q9NZM3 1697 aa24.5■■□□□ 1.51
COL1A1-211ENST00000507689 MAP3K1Q13233 1512 aa24.5■■□□□ 1.51
COL1A1-211ENST00000507689 LRRC9Q6ZRR7 1453 aa24.48■■□□□ 1.51
COL1A1-211ENST00000507689 YEATS2Q9ULM3 1422 aa24.48■■□□□ 1.51
COL1A1-211ENST00000507689 NCOA2Q15596 1464 aa24.47■■□□□ 1.51
COL1A1-211ENST00000507689 ATP10AO60312 1499 aa24.45■■□□□ 1.51
COL1A1-211ENST00000507689 HNRNPMP52272 730 aaKnown RBP eCLIP24.45■■□□□ 1.5
COL1A1-211ENST00000507689 KDM5CP41229 1560 aa24.45■■□□□ 1.5
COL1A1-211ENST00000507689 HECW2Q9P2P5 1572 aa24.45■■□□□ 1.5
COL1A1-211ENST00000507689 KIAA1107Q9UPP5 1409 aa24.44■■□□□ 1.5
COL1A1-211ENST00000507689 SAMD9LQ8IVG5 1584 aa24.44■■□□□ 1.5
COL1A1-211ENST00000507689 C9orf84Q5VXU9 1444 aa24.44■■□□□ 1.5
COL1A1-211ENST00000507689 TRAPPC8Q9Y2L5 1435 aa24.44■■□□□ 1.5
COL1A1-211ENST00000507689 SYCP2Q9BX26 1530 aa24.43■■□□□ 1.5
COL1A1-211ENST00000507689 SPAG9O60271 1321 aaKnown RBP24.42■■□□□ 1.5
COL1A1-211ENST00000507689 MLH3Q9UHC1 1453 aa24.42■■□□□ 1.5
COL1A1-211ENST00000507689 ARHGEF12Q9NZN5 1544 aa24.41■■□□□ 1.5
COL1A1-211ENST00000507689 MLECQ14165 292 aa24.39■■□□□ 1.49
COL1A1-211ENST00000507689 KANK4Q5T7N3 995 aaPredicted RBP24.39■■□□□ 1.49
COL1A1-211ENST00000507689 BCORL1Q5H9F3 1711 aa24.38■■□□□ 1.49
COL1A1-211ENST00000507689 RSPH4AQ5TD94 716 aa24.36■■□□□ 1.49
COL1A1-211ENST00000507689 ZNF644Q9H582 1327 aaPredicted RBP24.35■■□□□ 1.49
COL1A1-211ENST00000507689 ADAMTSL3P82987 1691 aa24.34■■□□□ 1.49
COL1A1-211ENST00000507689 ESF1Q9H501 851 aaKnown RBP24.33■■□□□ 1.49
COL1A1-211ENST00000507689 DIP2CQ9Y2E4 1556 aa24.32■■□□□ 1.48
COL1A1-211ENST00000507689 CAMSAP2Q08AD1 1489 aa24.31■■□□□ 1.48
COL1A1-211ENST00000507689 TSPY4P0CV99 314 aa24.29■■□□□ 1.48
COL1A1-211ENST00000507689 TSPY10P0CW01 314 aa24.29■■□□□ 1.48
COL1A1-211ENST00000507689 PTPRMP28827 1452 aa24.29■■□□□ 1.48
COL1A1-211ENST00000507689 ABCA6Q8N139 1617 aa24.28■■□□□ 1.48
COL1A1-211ENST00000507689 MADDQ8WXG6 1647 aa24.28■■□□□ 1.48
COL1A1-211ENST00000507689 MYOM3Q5VTT5 1437 aa24.28■■□□□ 1.48
COL1A1-211ENST00000507689 ATP7AQ04656 1500 aa24.28■■□□□ 1.48
COL1A1-211ENST00000507689 REREQ9P2R6 1566 aa24.28■■□□□ 1.48
COL1A1-211ENST00000507689 KIDINS220Q9ULH0 1771 aa24.27■■□□□ 1.48
COL1A1-211ENST00000507689 MIA2Q96PC5 1412 aa24.27■■□□□ 1.48
COL1A1-211ENST00000507689 CCDC141Q6ZP82 1450 aa24.26■■□□□ 1.47
COL1A1-211ENST00000507689 PLPPR3Q6T4P5 718 aa24.26■■□□□ 1.47
COL1A1-211ENST00000507689 MBD5Q9P267 1494 aa24.25■■□□□ 1.47
COL1A1-211ENST00000507689 RIMS1Q86UR5 1692 aaKnown RBP24.24■■□□□ 1.47
COL1A1-211ENST00000507689 INO80Q9ULG1 1556 aaPredicted RBP24.22■■□□□ 1.47
COL1A1-211ENST00000507689 AGLP35573 1532 aa24.22■■□□□ 1.47
COL1A1-211ENST00000507689 RTEL1-TNFRSF6BF6WH68 1400 aa24.22■■□□□ 1.47
COL1A1-211ENST00000507689 SIGLEC1Q9BZZ2 1709 aa24.21■■□□□ 1.47
COL1A1-211ENST00000507689 FER1L4A9Z1Z3 1794 aa24.2■■□□□ 1.46
COL1A1-211ENST00000507689 A2MP01023 1474 aa24.19■■□□□ 1.46
COL1A1-211ENST00000507689 ARHGEF5Q12774 1597 aa24.18■■□□□ 1.46
COL1A1-211ENST00000507689 ADGBQ8N7X0 1667 aa24.16■■□□□ 1.46
COL1A1-211ENST00000507689 CNTLNQ9NXG0 1405 aa24.12■■□□□ 1.45
COL1A1-211ENST00000507689 GGT6Q6P531 493 aa24.12■■□□□ 1.45
COL1A1-211ENST00000507689 FGD6Q6ZV73 1430 aa24.11■■□□□ 1.45
COL1A1-211ENST00000507689 DHX29Q7Z478 1369 aaKnown RBP24.11■■□□□ 1.45
COL1A1-211ENST00000507689 PTPN23Q9H3S7 1636 aa24.1■■□□□ 1.45
COL1A1-211ENST00000507689 PPP6R1Q9UPN7 881 aa24.08■■□□□ 1.45
COL1A1-211ENST00000507689 PLXNC1O60486 1568 aa24.08■■□□□ 1.44
COL1A1-211ENST00000507689 FAM50AQ14320 339 aaKnown RBP24.07■■□□□ 1.44
COL1A1-211ENST00000507689 KIF3BO15066 747 aa24.06■■□□□ 1.44
COL1A1-211ENST00000507689 CEBPAP49715 358 aaPredicted RBP24.05■■□□□ 1.44
COL1A1-211ENST00000507689 MAST1Q9Y2H9 1570 aa24.03■■□□□ 1.44
COL1A1-211ENST00000507689 TCOF1Q13428 1488 aaKnown RBP24.02■■□□□ 1.44
COL1A1-211ENST00000507689 SHANK2Q9UPX8 1470 aa24■■□□□ 1.43
COL1A1-211ENST00000507689 DAPK1P53355 1430 aa23.99■■□□□ 1.43
COL1A1-211ENST00000507689 PPARGC1BQ86YN6 1023 aaKnown RBP23.98■■□□□ 1.43
COL1A1-211ENST00000507689 ABCC5O15440 1437 aa23.98■■□□□ 1.43
COL1A1-211ENST00000507689 ZMYM3Q14202 1370 aa23.97■■□□□ 1.43
COL1A1-211ENST00000507689 DNMT1P26358 1616 aaKnown RBP23.96■■□□□ 1.43
COL1A1-211ENST00000507689 ANKRD30AQ9BXX3 1397 aa23.96■■□□□ 1.43
COL1A1-211ENST00000507689 WASHC2CQ9Y4E1 1318 aa23.96■■□□□ 1.43
COL1A1-211ENST00000507689 RRP7BPQ9NSQ0 103 aa23.96■■□□□ 1.43
COL1A1-211ENST00000507689 UHRF1BP1Q6BDS2 1440 aa23.95■■□□□ 1.42
COL1A1-211ENST00000507689 CHIC2Q9UKJ5 165 aa23.95■■□□□ 1.42
COL1A1-211ENST00000507689 MROH2AA6NES4 1674 aa23.95■■□□□ 1.42
COL1A1-211ENST00000507689 DUOX2Q9NRD8 1548 aa23.94■■□□□ 1.42
COL1A1-211ENST00000507689 LMTK3Q96Q04 1460 aa23.94■■□□□ 1.42
COL1A1-211ENST00000507689 KIF15Q9NS87 1388 aa23.94■■□□□ 1.42
COL1A1-211ENST00000507689 C3P01024 1663 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms