RNA–Protein interactions for RNA: ENST00000506971.1

CALCOCO2-208, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 519 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-208ENST00000506971 C2orf72A6NCS6 295 aa11□□□□□ -0.65
CALCOCO2-208ENST00000506971 DOK7Q18PE1 504 aa11□□□□□ -0.65
CALCOCO2-208ENST00000506971 RIMBP2O15034 1052 aa10.99□□□□□ -0.65
CALCOCO2-208ENST00000506971 DNAJC5Q9H3Z4 198 aa10.99□□□□□ -0.65
CALCOCO2-208ENST00000506971 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.99□□□□□ -0.65
CALCOCO2-208ENST00000506971 GTPBP6O43824 516 aaPredicted RBP10.98□□□□□ -0.65
CALCOCO2-208ENST00000506971 LCE2DQ5TA82 110 aaPredicted RBP10.98□□□□□ -0.65
CALCOCO2-208ENST00000506971 BBXQ8WY36 941 aaPredicted RBP10.97□□□□□ -0.65
CALCOCO2-208ENST00000506971 EMP3P54852 163 aa10.96□□□□□ -0.65
CALCOCO2-208ENST00000506971 CFAP44Q96MT7 982 aa10.95□□□□□ -0.66
CALCOCO2-208ENST00000506971 HOXB3P14651 431 aaPredicted RBP10.94□□□□□ -0.66
CALCOCO2-208ENST00000506971 PAXIP1Q6ZW49 1069 aaPredicted RBP10.91□□□□□ -0.66
CALCOCO2-208ENST00000506971 SPRYD3Q8NCJ5 442 aa10.91□□□□□ -0.66
CALCOCO2-208ENST00000506971 FAM205CA6NFA0 338 aa10.9□□□□□ -0.66
CALCOCO2-208ENST00000506971 ARSIQ5FYB1 569 aa10.88□□□□□ -0.67
CALCOCO2-208ENST00000506971 KIF3CO14782 793 aa10.87□□□□□ -0.67
CALCOCO2-208ENST00000506971 PLPP6Q8IY26 295 aa10.87□□□□□ -0.67
CALCOCO2-208ENST00000506971 ERBB3P21860 1342 aa10.86□□□□□ -0.67
CALCOCO2-208ENST00000506971 KHSRPQ92945 711 aaKnown RBP eCLIP10.86□□□□□ -0.67
CALCOCO2-208ENST00000506971 GPHNQ9NQX3 736 aaPredicted RBP10.86□□□□□ -0.67
CALCOCO2-208ENST00000506971 DSG2Q14126 1118 aa10.85□□□□□ -0.67
CALCOCO2-208ENST00000506971 HOXB1P14653 301 aaPredicted RBP10.84□□□□□ -0.67
CALCOCO2-208ENST00000506971 PDE4AP27815 886 aa10.84□□□□□ -0.67
CALCOCO2-208ENST00000506971 CDAN1Q8IWY9 1227 aa10.84□□□□□ -0.67
CALCOCO2-208ENST00000506971 LARP6Q9BRS8 491 aaKnown RBP10.84□□□□□ -0.67
CALCOCO2-208ENST00000506971 PLSCR2Q9NRY7 297 aa10.83□□□□□ -0.68
CALCOCO2-208ENST00000506971 FOXK1P85037 733 aa10.81□□□□□ -0.68
CALCOCO2-208ENST00000506971 UPF1Q92900 1129 aaKnown RBP eCLIP10.81□□□□□ -0.68
CALCOCO2-208ENST00000506971 HS3ST6Q96QI5 342 aa10.81□□□□□ -0.68
CALCOCO2-208ENST00000506971 NUDT7P0C024 238 aa10.8□□□□□ -0.68
CALCOCO2-208ENST00000506971 ZSWIM6Q9HCJ5 1215 aa10.8□□□□□ -0.68
CALCOCO2-208ENST00000506971 VARS2Q5ST30 1063 aaKnown RBP10.79□□□□□ -0.68
CALCOCO2-208ENST00000506971 PPP1R15BQ5SWA1 713 aa10.79□□□□□ -0.68
CALCOCO2-208ENST00000506971 GPR153Q6NV75 609 aa10.79□□□□□ -0.68
CALCOCO2-208ENST00000506971 PCDHGA4Q9Y5G9 962 aa10.79□□□□□ -0.68
CALCOCO2-208ENST00000506971 CADPS2Q86UW7 1296 aa10.78□□□□□ -0.68
CALCOCO2-208ENST00000506971 NCKAP5LQ9HCH0 1330 aa10.78□□□□□ -0.68
CALCOCO2-208ENST00000506971 DDX27Q96GQ7 796 aaKnown RBP10.77□□□□□ -0.69
CALCOCO2-208ENST00000506971 CRISPLD2Q9H0B8 497 aa10.77□□□□□ -0.69
CALCOCO2-208ENST00000506971 TBC1D12O60347 775 aa10.75□□□□□ -0.69
CALCOCO2-208ENST00000506971 PCDH10Q9P2E7 1040 aa10.75□□□□□ -0.69
CALCOCO2-208ENST00000506971 POTEB3A0JP26 581 aa10.73□□□□□ -0.69
CALCOCO2-208ENST00000506971 POTEBQ6S5H4 581 aa10.73□□□□□ -0.69
CALCOCO2-208ENST00000506971 SLC34A2O95436 690 aa10.71□□□□□ -0.69
CALCOCO2-208ENST00000506971 ZNF316A6NFI3 1004 aaPredicted RBP10.7□□□□□ -0.7
CALCOCO2-208ENST00000506971 LHX6Q9UPM6 363 aa10.7□□□□□ -0.7
CALCOCO2-208ENST00000506971 WDR70Q9NW82 654 aa10.68□□□□□ -0.7
CALCOCO2-208ENST00000506971 MAP3K9P80192 1104 aa10.67□□□□□ -0.7
CALCOCO2-208ENST00000506971 PTCD2Q8WV60 388 aaKnown RBP10.67□□□□□ -0.7
CALCOCO2-208ENST00000506971 OXER1Q8TDS5 423 aa10.63□□□□□ -0.71
CALCOCO2-208ENST00000506971 MFSD10Q14728 455 aa10.62□□□□□ -0.71
CALCOCO2-208ENST00000506971 TSHZ2Q9NRE2 1034 aa10.62□□□□□ -0.71
CALCOCO2-208ENST00000506971 ZNF687Q8N1G0 1237 aa10.61□□□□□ -0.71
CALCOCO2-208ENST00000506971 EVI5O60447 810 aa10.59□□□□□ -0.71
CALCOCO2-208ENST00000506971 ANKRD13DQ6ZTN6 518 aa10.59□□□□□ -0.71
CALCOCO2-208ENST00000506971 AXIN2Q9Y2T1 843 aa10.59□□□□□ -0.71
CALCOCO2-208ENST00000506971 ZNF454Q8N9F8 522 aa10.58□□□□□ -0.72
CALCOCO2-208ENST00000506971 KRTAP3-3Q9BYR6 98 aa10.58□□□□□ -0.72
CALCOCO2-208ENST00000506971 KRTAP3-2Q9BYR7 98 aa10.58□□□□□ -0.72
CALCOCO2-208ENST00000506971 EMILIN3Q9NT22 766 aa10.58□□□□□ -0.72
CALCOCO2-208ENST00000506971 PPP4R3BQ5MIZ7 849 aa10.57□□□□□ -0.72
CALCOCO2-208ENST00000506971 PSDA5PKW4 1024 aaPredicted RBP10.56□□□□□ -0.72
CALCOCO2-208ENST00000506971 DPYSL4O14531 572 aa10.56□□□□□ -0.72
CALCOCO2-208ENST00000506971 HAP1P54257 671 aaPredicted RBP10.53□□□□□ -0.72
CALCOCO2-208ENST00000506971 E2F4Q16254 413 aa10.53□□□□□ -0.72
CALCOCO2-208ENST00000506971 SPNS2Q8IVW8 549 aa10.53□□□□□ -0.72
CALCOCO2-208ENST00000506971 PLCB2Q00722 1185 aa10.52□□□□□ -0.73
CALCOCO2-208ENST00000506971 KCNH8Q96L42 1107 aa10.52□□□□□ -0.73
CALCOCO2-208ENST00000506971 KDM4FA0A1W2PPD8 638 aa10.5□□□□□ -0.73
CALCOCO2-208ENST00000506971 KCNK17Q96T54 332 aa10.5□□□□□ -0.73
CALCOCO2-208ENST00000506971 PSEN2P49810 448 aa10.49□□□□□ -0.73
CALCOCO2-208ENST00000506971 ARHGAP33O14559 1287 aa10.48□□□□□ -0.73
CALCOCO2-208ENST00000506971 LSM11P83369 360 aaKnown RBP eCLIP10.48□□□□□ -0.73
CALCOCO2-208ENST00000506971 CAMK2BQ13554 666 aa10.48□□□□□ -0.73
CALCOCO2-208ENST00000506971 PBX2P40425 430 aa10.47□□□□□ -0.73
CALCOCO2-208ENST00000506971 DDX12PQ92771 950 aa10.46□□□□□ -0.73
CALCOCO2-208ENST00000506971 FOSBP53539 338 aa10.45□□□□□ -0.74
CALCOCO2-208ENST00000506971 MMRN1Q13201 1228 aa10.45□□□□□ -0.74
CALCOCO2-208ENST00000506971 POTEEQ6S8J3 1075 aa10.44□□□□□ -0.74
CALCOCO2-208ENST00000506971 ZDHHC16Q969W1 377 aa10.44□□□□□ -0.74
CALCOCO2-208ENST00000506971 JPH4Q96JJ6 628 aa10.44□□□□□ -0.74
CALCOCO2-208ENST00000506971 STAC3Q96MF2 364 aa10.44□□□□□ -0.74
CALCOCO2-208ENST00000506971 ANO8Q9HCE9 1232 aaPredicted RBP10.44□□□□□ -0.74
CALCOCO2-208ENST00000506971 DMRTA1Q5VZB9 504 aa10.43□□□□□ -0.74
CALCOCO2-208ENST00000506971 RBM33Q96EV2 1170 aaKnown RBP10.43□□□□□ -0.74
CALCOCO2-208ENST00000506971 PTPREP23469 700 aa10.42□□□□□ -0.74
CALCOCO2-208ENST00000506971 ADAM33Q9BZ11 813 aa10.41□□□□□ -0.74
CALCOCO2-208ENST00000506971 GRXCR2A6NFK2 248 aa10.4□□□□□ -0.74
CALCOCO2-208ENST00000506971 MYT1LQ9UL68 1186 aa10.4□□□□□ -0.74
CALCOCO2-208ENST00000506971 PCDHGA10Q9Y5H3 936 aa10.4□□□□□ -0.74
CALCOCO2-208ENST00000506971 NBR1Q14596 966 aa10.39□□□□□ -0.75
CALCOCO2-208ENST00000506971 TYW1BQ6NUM6 668 aa10.39□□□□□ -0.75
CALCOCO2-208ENST00000506971 ADGRD1Q6QNK2 874 aa10.38□□□□□ -0.75
CALCOCO2-208ENST00000506971 BCL2L12Q9HB09 334 aa10.38□□□□□ -0.75
CALCOCO2-208ENST00000506971 SPDYE16A6NNV3 312 aaPredicted RBP10.37□□□□□ -0.75
CALCOCO2-208ENST00000506971 PHF14O94880 888 aa10.37□□□□□ -0.75
CALCOCO2-208ENST00000506971 RNF166Q96A37 237 aaPredicted RBP10.36□□□□□ -0.75
CALCOCO2-208ENST00000506971 MAP3K7O43318 606 aa10.35□□□□□ -0.75
CALCOCO2-208ENST00000506971 PDIA6Q15084 440 aa10.35□□□□□ -0.75
CALCOCO2-208ENST00000506971 FBXW7Q969H0 707 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms