RNA–Protein interactions for RNA: ENST00000506842.1

HERC6-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 706 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-207ENST00000506842 LMOD2Q6P5Q4 547 aa9.98□□□□□ -0.81
HERC6-207ENST00000506842 OCEL1Q9H607 264 aa9.98□□□□□ -0.81
HERC6-207ENST00000506842 TMEM121BQ9BXQ6 578 aaPredicted RBP9.97□□□□□ -0.81
HERC6-207ENST00000506842 GABBR2O75899 941 aa9.96□□□□□ -0.82
HERC6-207ENST00000506842 PPP1R15BQ5SWA1 713 aa9.96□□□□□ -0.82
HERC6-207ENST00000506842 SEMA3EO15041 775 aa9.95□□□□□ -0.82
HERC6-207ENST00000506842 TULP1O00294 542 aaPredicted RBP9.93□□□□□ -0.82
HERC6-207ENST00000506842 BOLA1Q9Y3E2 137 aa9.92□□□□□ -0.82
HERC6-207ENST00000506842 DSG2Q14126 1118 aa9.91□□□□□ -0.82
HERC6-207ENST00000506842 FOXK1P85037 733 aa9.9□□□□□ -0.82
HERC6-207ENST00000506842 KIF3CO14782 793 aa9.89□□□□□ -0.83
HERC6-207ENST00000506842 PLCG2P16885 1265 aa9.89□□□□□ -0.83
HERC6-207ENST00000506842 PELP1Q8IZL8 1130 aaKnown RBP9.89□□□□□ -0.83
HERC6-207ENST00000506842 TMC2Q8TDI7 906 aa9.89□□□□□ -0.83
HERC6-207ENST00000506842 L3MBTL3Q96JM7 780 aaPredicted RBP9.87□□□□□ -0.83
HERC6-207ENST00000506842 EMILIN3Q9NT22 766 aa9.87□□□□□ -0.83
HERC6-207ENST00000506842 SMYD5Q6GMV2 418 aa9.86□□□□□ -0.83
HERC6-207ENST00000506842 C2orf72A6NCS6 295 aa9.85□□□□□ -0.83
HERC6-207ENST00000506842 ZC3H15Q8WU90 426 aaKnown RBP9.85□□□□□ -0.83
HERC6-207ENST00000506842 DCBLD2Q96PD2 775 aa9.85□□□□□ -0.83
HERC6-207ENST00000506842 COLQQ9Y215 455 aaPredicted RBP9.85□□□□□ -0.83
HERC6-207ENST00000506842 G3V3G9 751 aa9.84□□□□□ -0.83
HERC6-207ENST00000506842 SPDYE16A6NNV3 312 aaPredicted RBP9.83□□□□□ -0.84
HERC6-207ENST00000506842 PLPP6Q8IY26 295 aa9.83□□□□□ -0.84
HERC6-207ENST00000506842 SLC39A7Q92504 469 aa9.83□□□□□ -0.84
HERC6-207ENST00000506842 POTEFA5A3E0 1075 aa9.82□□□□□ -0.84
HERC6-207ENST00000506842 DPYSL4O14531 572 aa9.82□□□□□ -0.84
HERC6-207ENST00000506842 PDIA6Q15084 440 aa9.82□□□□□ -0.84
HERC6-207ENST00000506842 SEC24BO95487 1268 aa9.81□□□□□ -0.84
HERC6-207ENST00000506842 C7P10643 843 aa9.81□□□□□ -0.84
HERC6-207ENST00000506842 TMEM92Q6UXU6 159 aa9.81□□□□□ -0.84
HERC6-207ENST00000506842 MLLT3P42568 568 aaPredicted RBP9.8□□□□□ -0.84
HERC6-207ENST00000506842 POTEIP0CG38 1075 aa9.78□□□□□ -0.84
HERC6-207ENST00000506842 ZMYND10O75800 440 aa9.77□□□□□ -0.85
HERC6-207ENST00000506842 METRNQ9UJH8 293 aa9.76□□□□□ -0.85
HERC6-207ENST00000506842 SP7Q8TDD2 431 aaPredicted RBP9.75□□□□□ -0.85
HERC6-207ENST00000506842 OXER1Q8TDS5 423 aa9.74□□□□□ -0.85
HERC6-207ENST00000506842 RBM26Q5T8P6 1007 aaKnown RBP9.73□□□□□ -0.85
HERC6-207ENST00000506842 BARGINQ6ZT62 677 aa9.72□□□□□ -0.85
HERC6-207ENST00000506842 MAP3K9P80192 1104 aa9.71□□□□□ -0.86
HERC6-207ENST00000506842 GPIHBP1Q8IV16 184 aa9.7□□□□□ -0.86
HERC6-207ENST00000506842 SLC24A3Q9HC58 644 aa9.7□□□□□ -0.86
HERC6-207ENST00000506842 CCDC180Q9P1Z9 1646 aa9.7□□□□□ -0.86
HERC6-207ENST00000506842 BRPF1P55201 1214 aaPredicted RBP9.69□□□□□ -0.86
HERC6-207ENST00000506842 PTGER2P43116 358 aa9.68□□□□□ -0.86
HERC6-207ENST00000506842 C3orf67Q6ZVT6 689 aa9.68□□□□□ -0.86
HERC6-207ENST00000506842 UPF1Q92900 1129 aaKnown RBP eCLIP9.68□□□□□ -0.86
HERC6-207ENST00000506842 TMEM132AQ24JP5 1023 aa9.67□□□□□ -0.86
HERC6-207ENST00000506842 PTCD2Q8WV60 388 aaKnown RBP9.66□□□□□ -0.86
HERC6-207ENST00000506842 GPR37O15354 613 aa9.65□□□□□ -0.86
HERC6-207ENST00000506842 SLC34A2O95436 690 aa9.65□□□□□ -0.86
HERC6-207ENST00000506842 TBC1D12O60347 775 aa9.63□□□□□ -0.87
HERC6-207ENST00000506842 OSBPP22059 807 aa9.63□□□□□ -0.87
HERC6-207ENST00000506842 GRXCR2A6NFK2 248 aa9.62□□□□□ -0.87
HERC6-207ENST00000506842 EVI5O60447 810 aa9.62□□□□□ -0.87
HERC6-207ENST00000506842 ABCC9O60706 1549 aa9.61□□□□□ -0.87
HERC6-207ENST00000506842 AK7Q96M32 723 aa9.61□□□□□ -0.87
HERC6-207ENST00000506842 ANO8Q9HCE9 1232 aaPredicted RBP9.6□□□□□ -0.87
HERC6-207ENST00000506842 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.6□□□□□ -0.87
HERC6-207ENST00000506842 NEUROD2Q15784 382 aa9.58□□□□□ -0.88
HERC6-207ENST00000506842 DDX12PQ92771 950 aa9.58□□□□□ -0.88
HERC6-207ENST00000506842 ZNF316A6NFI3 1004 aaPredicted RBP9.56□□□□□ -0.88
HERC6-207ENST00000506842 PRIM1P49642 420 aaKnown RBP9.56□□□□□ -0.88
HERC6-207ENST00000506842 KRI1Q8N9T8 703 aaKnown RBP9.56□□□□□ -0.88
HERC6-207ENST00000506842 NUTM2FA1L443 756 aa9.55□□□□□ -0.88
HERC6-207ENST00000506842 TRIM66O15016 1216 aa9.54□□□□□ -0.88
HERC6-207ENST00000506842 GTF3C3Q9Y5Q9 886 aa9.53□□□□□ -0.88
HERC6-207ENST00000506842 MINK1Q8N4C8 1332 aaPredicted RBP9.53□□□□□ -0.88
HERC6-207ENST00000506842 KDM4FA0A1W2PPD8 638 aa9.52□□□□□ -0.89
HERC6-207ENST00000506842 FCHSD2O94868 740 aa9.52□□□□□ -0.89
HERC6-207ENST00000506842 POTEJP0CG39 1038 aa9.52□□□□□ -0.89
HERC6-207ENST00000506842 HIC1Q14526 733 aa9.52□□□□□ -0.89
HERC6-207ENST00000506842 PCDHGA4Q9Y5G9 962 aa9.52□□□□□ -0.89
HERC6-207ENST00000506842 GNPATO15228 680 aa9.51□□□□□ -0.89
HERC6-207ENST00000506842 PHF14O94880 888 aa9.51□□□□□ -0.89
HERC6-207ENST00000506842 MAP2K5Q13163 448 aa9.51□□□□□ -0.89
HERC6-207ENST00000506842 EPAS1Q99814 870 aa9.51□□□□□ -0.89
HERC6-207ENST00000506842 IRF6O14896 467 aa9.49□□□□□ -0.89
HERC6-207ENST00000506842 PTGDRQ13258 359 aa9.49□□□□□ -0.89
HERC6-207ENST00000506842 EN1Q05925 392 aaPredicted RBP9.48□□□□□ -0.89
HERC6-207ENST00000506842 PDE4DQ08499 809 aa9.48□□□□□ -0.89
HERC6-207ENST00000506842 POTEB2H3BUK9 544 aa9.47□□□□□ -0.89
HERC6-207ENST00000506842 CCDC102AQ96A19 550 aa9.47□□□□□ -0.89
HERC6-207ENST00000506842 GPBP1L1Q9HC44 474 aaPredicted RBP9.47□□□□□ -0.89
HERC6-207ENST00000506842 PCDHGA10Q9Y5H3 936 aa9.47□□□□□ -0.89
HERC6-207ENST00000506842 FECHP22830 423 aa9.46□□□□□ -0.9
HERC6-207ENST00000506842 HOXB3P14651 431 aaPredicted RBP9.45□□□□□ -0.9
HERC6-207ENST00000506842 AMHR2Q16671 573 aa9.45□□□□□ -0.9
HERC6-207ENST00000506842 TYW1BQ6NUM6 668 aa9.45□□□□□ -0.9
HERC6-207ENST00000506842 SLAIN1Q8ND83 568 aa9.45□□□□□ -0.9
HERC6-207ENST00000506842 JPH4Q96JJ6 628 aa9.45□□□□□ -0.9
HERC6-207ENST00000506842 KDM4CQ9H3R0 1056 aa9.45□□□□□ -0.9
HERC6-207ENST00000506842 NPDC1Q9NQX5 325 aaPredicted RBP9.45□□□□□ -0.9
HERC6-207ENST00000506842 FOSBP53539 338 aa9.43□□□□□ -0.9
HERC6-207ENST00000506842 DOK7Q18PE1 504 aa9.43□□□□□ -0.9
HERC6-207ENST00000506842 FBXW7Q969H0 707 aa9.43□□□□□ -0.9
HERC6-207ENST00000506842 CDHR5Q9HBB8 845 aa9.43□□□□□ -0.9
HERC6-207ENST00000506842 MAP3K7O43318 606 aa9.42□□□□□ -0.9
HERC6-207ENST00000506842 ZSWIM6Q9HCJ5 1215 aa9.42□□□□□ -0.9
HERC6-207ENST00000506842 DAXXQ9UER7 740 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms