RNA–Protein interactions for RNA: ENST00000506747.5

CLOCK-205, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 1,337 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-205ENST00000506747 SOX12O15370 315 aa10.79□□□□□ -0.68
CLOCK-205ENST00000506747 RIOK3O14730 519 aaKnown RBP10.77□□□□□ -0.69
CLOCK-205ENST00000506747 ECM2O94769 699 aaPredicted RBP10.77□□□□□ -0.69
CLOCK-205ENST00000506747 RNF25Q96BH1 459 aaPredicted RBP10.73□□□□□ -0.69
CLOCK-205ENST00000506747 MS4A4AQ96JQ5 239 aa10.73□□□□□ -0.69
CLOCK-205ENST00000506747 PKD2Q13563 968 aa10.72□□□□□ -0.69
CLOCK-205ENST00000506747 VGFO15240 615 aaPredicted RBP10.71□□□□□ -0.69
CLOCK-205ENST00000506747 ARSIQ5FYB1 569 aa10.71□□□□□ -0.69
CLOCK-205ENST00000506747 TAOK2Q9UL54 1235 aa10.71□□□□□ -0.69
CLOCK-205ENST00000506747 ANKRD13DQ6ZTN6 518 aa10.69□□□□□ -0.7
CLOCK-205ENST00000506747 PHF8Q9UPP1 1060 aa10.69□□□□□ -0.7
CLOCK-205ENST00000506747 ZNF316A6NFI3 1004 aaPredicted RBP10.68□□□□□ -0.7
CLOCK-205ENST00000506747 PLA2G2EQ9NZK7 142 aa10.68□□□□□ -0.7
CLOCK-205ENST00000506747 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.67□□□□□ -0.7
CLOCK-205ENST00000506747 ZFP91Q96JP5 570 aaPredicted RBP10.67□□□□□ -0.7
CLOCK-205ENST00000506747 LSM11P83369 360 aaKnown RBP eCLIP10.64□□□□□ -0.71
CLOCK-205ENST00000506747 RGL2O15211 777 aa10.63□□□□□ -0.71
CLOCK-205ENST00000506747 KHSRPQ92945 711 aaKnown RBP eCLIP10.62□□□□□ -0.716e-7■■■□□ 18.9
CLOCK-205ENST00000506747 SLC24A1O60721 1099 aa10.61□□□□□ -0.71
CLOCK-205ENST00000506747 NLRP6P59044 892 aa10.6□□□□□ -0.71
CLOCK-205ENST00000506747 PBX2P40425 430 aa10.59□□□□□ -0.71
CLOCK-205ENST00000506747 BCL11BQ9C0K0 894 aaPredicted RBP10.58□□□□□ -0.71
CLOCK-205ENST00000506747 STK24Q9Y6E0 443 aa10.58□□□□□ -0.71
CLOCK-205ENST00000506747 STK25O00506 426 aa10.58□□□□□ -0.72
CLOCK-205ENST00000506747 FBXO22Q8NEZ5 403 aa10.57□□□□□ -0.72
CLOCK-205ENST00000506747 KIF3CO14782 793 aa10.54□□□□□ -0.72
CLOCK-205ENST00000506747 NUDT7P0C024 238 aa10.53□□□□□ -0.72
CLOCK-205ENST00000506747 C2orf72A6NCS6 295 aa10.51□□□□□ -0.73
CLOCK-205ENST00000506747 HCSTQ9UBK5 93 aa10.51□□□□□ -0.73
CLOCK-205ENST00000506747 LHX6Q9UPM6 363 aa10.51□□□□□ -0.73
CLOCK-205ENST00000506747 SLC34A2O95436 690 aa10.5□□□□□ -0.73
CLOCK-205ENST00000506747 POTEEQ6S8J3 1075 aa10.5□□□□□ -0.73
CLOCK-205ENST00000506747 MFRPQ9BY79 579 aa10.48□□□□□ -0.73
CLOCK-205ENST00000506747 AXIN2Q9Y2T1 843 aa10.48□□□□□ -0.73
CLOCK-205ENST00000506747 PCDHGA4Q9Y5G9 962 aa10.48□□□□□ -0.73
CLOCK-205ENST00000506747 ARHGAP33O14559 1287 aa10.43□□□□□ -0.74
CLOCK-205ENST00000506747 ADGRD1Q6QNK2 874 aa10.43□□□□□ -0.74
CLOCK-205ENST00000506747 PSDA5PKW4 1024 aaPredicted RBP10.42□□□□□ -0.74
CLOCK-205ENST00000506747 CHGAP10645 457 aaKnown RBP10.42□□□□□ -0.74
CLOCK-205ENST00000506747 HS6ST3Q8IZP7 471 aa10.42□□□□□ -0.74
CLOCK-205ENST00000506747 TMC2Q8TDI7 906 aa10.41□□□□□ -0.74
CLOCK-205ENST00000506747 DCAF8L2P0C7V8 631 aa10.39□□□□□ -0.75
CLOCK-205ENST00000506747 IRX2Q9BZI1 471 aaPredicted RBP10.39□□□□□ -0.75
CLOCK-205ENST00000506747 TK2O00142 265 aa10.38□□□□□ -0.75
CLOCK-205ENST00000506747 PLCB2Q00722 1185 aa10.36□□□□□ -0.75
CLOCK-205ENST00000506747 HRO43593 1189 aa10.34□□□□□ -0.75
CLOCK-205ENST00000506747 KDM4FA0A1W2PPD8 638 aa10.33□□□□□ -0.76
CLOCK-205ENST00000506747 DMRTA1Q5VZB9 504 aa10.31□□□□□ -0.76
CLOCK-205ENST00000506747 PTCD2Q8WV60 388 aaKnown RBP10.31□□□□□ -0.76
CLOCK-205ENST00000506747 PSEN2P49810 448 aa10.3□□□□□ -0.76
CLOCK-205ENST00000506747 KCTD12Q96CX2 325 aaKnown RBP10.28□□□□□ -0.76
CLOCK-205ENST00000506747 DNAJC5Q9H3Z4 198 aa10.28□□□□□ -0.76
CLOCK-205ENST00000506747 PPP4R3BQ5MIZ7 849 aa10.27□□□□□ -0.77
CLOCK-205ENST00000506747 STAC3Q96MF2 364 aa10.27□□□□□ -0.77
CLOCK-205ENST00000506747 RYDENQ9NUL5 291 aaKnown RBP10.27□□□□□ -0.77
CLOCK-205ENST00000506747 BBXQ8WY36 941 aaPredicted RBP10.26□□□□□ -0.77
CLOCK-205ENST00000506747 PPP1R37O75864 691 aa10.25□□□□□ -0.77
CLOCK-205ENST00000506747 FOXK1P85037 733 aa10.24□□□□□ -0.77
CLOCK-205ENST00000506747 NKX1-1Q15270 411 aaPredicted RBP10.24□□□□□ -0.77
CLOCK-205ENST00000506747 TBC1D12O60347 775 aa10.23□□□□□ -0.77
CLOCK-205ENST00000506747 PLPP6Q8IY26 295 aa10.22□□□□□ -0.77
CLOCK-205ENST00000506747 KCNH8Q96L42 1107 aa10.22□□□□□ -0.77
CLOCK-205ENST00000506747 RGS20O76081 388 aa10.21□□□□□ -0.78
CLOCK-205ENST00000506747 GPHNQ9NQX3 736 aaPredicted RBP10.19□□□□□ -0.78
CLOCK-205ENST00000506747 IFFO2Q5TF58 517 aa10.18□□□□□ -0.78
CLOCK-205ENST00000506747 KCNK17Q96T54 332 aa10.18□□□□□ -0.78
CLOCK-205ENST00000506747 VPS9D1Q9Y2B5 631 aa10.17□□□□□ -0.78
CLOCK-205ENST00000506747 PTPN5P54829 565 aa10.15□□□□□ -0.78
CLOCK-205ENST00000506747 DSG2Q14126 1118 aa10.15□□□□□ -0.78
CLOCK-205ENST00000506747 Q6ZNB5 142 aa10.14□□□□□ -0.79
CLOCK-205ENST00000506747 SLC4A5Q9BY07 1137 aa10.14□□□□□ -0.79
CLOCK-205ENST00000506747 GTPBP6O43824 516 aaPredicted RBP10.12□□□□□ -0.79
CLOCK-205ENST00000506747 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.11□□□□□ -0.79
CLOCK-205ENST00000506747 THSD4Q6ZMP0 1018 aa10.09□□□□□ -0.79
CLOCK-205ENST00000506747 BCL2L12Q9HB09 334 aa10.09□□□□□ -0.79
CLOCK-205ENST00000506747 A0A0G2JS52 829 aa10.08□□□□□ -0.8
CLOCK-205ENST00000506747 BHMG1C9JSJ3 638 aaPredicted RBP10.08□□□□□ -0.8
CLOCK-205ENST00000506747 HAP1P54257 671 aaPredicted RBP10.08□□□□□ -0.8
CLOCK-205ENST00000506747 PAXIP1Q6ZW49 1069 aaPredicted RBP10.08□□□□□ -0.8
CLOCK-205ENST00000506747 OXER1Q8TDS5 423 aa10.08□□□□□ -0.8
CLOCK-205ENST00000506747 ZNF454Q8N9F8 522 aa10.07□□□□□ -0.8
CLOCK-205ENST00000506747 VSIG10Q8N0Z9 540 aa10.07□□□□□ -0.8
CLOCK-205ENST00000506747 GOLGA8CPA6NN73 597 aa10.06□□□□□ -0.8
CLOCK-205ENST00000506747 SPRYD3Q8NCJ5 442 aa10.06□□□□□ -0.8
CLOCK-205ENST00000506747 KDM2AQ9Y2K7 1162 aa10.06□□□□□ -0.8
CLOCK-205ENST00000506747 PTPREP23469 700 aa10.05□□□□□ -0.8
CLOCK-205ENST00000506747 WNT2BQ93097 391 aa10.05□□□□□ -0.8
CLOCK-205ENST00000506747 FOSBP53539 338 aa10.04□□□□□ -0.8
CLOCK-205ENST00000506747 MRPL50Q8N5N7 158 aaKnown RBP10.04□□□□□ -0.8
CLOCK-205ENST00000506747 ZBED2Q9BTP6 218 aa10.04□□□□□ -0.8
CLOCK-205ENST00000506747 UPF1Q92900 1129 aaKnown RBP eCLIP10.03□□□□□ -0.8
CLOCK-205ENST00000506747 CFAP44Q96MT7 982 aa10.02□□□□□ -0.81
CLOCK-205ENST00000506747 PDE4AP27815 886 aa10□□□□□ -0.81
CLOCK-205ENST00000506747 TSHZ2Q9NRE2 1034 aa10□□□□□ -0.81
CLOCK-205ENST00000506747 NBPF3Q9H094 633 aa9.99□□□□□ -0.81
CLOCK-205ENST00000506747 CRISPLD2Q9H0B8 497 aa9.99□□□□□ -0.81
CLOCK-205ENST00000506747 ANO8Q9HCE9 1232 aaPredicted RBP9.98□□□□□ -0.81
CLOCK-205ENST00000506747 JPH4Q96JJ6 628 aa9.97□□□□□ -0.81
CLOCK-205ENST00000506747 NCKAP5LQ9HCH0 1330 aa9.96□□□□□ -0.81
CLOCK-205ENST00000506747 PPP1R15BQ5SWA1 713 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms