RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 KIF3CO14782 793 aa7.39□□□□□ -1.23
GYPB-207ENST00000506679 MFSD10Q14728 455 aa7.39□□□□□ -1.23
GYPB-207ENST00000506679 TMEM92Q6UXU6 159 aa7.38□□□□□ -1.23
GYPB-207ENST00000506679 G3V3G9 751 aa7.37□□□□□ -1.23
GYPB-207ENST00000506679 GPHNQ9NQX3 736 aaPredicted RBP7.37□□□□□ -1.23
GYPB-207ENST00000506679 PDE4AP27815 886 aa7.36□□□□□ -1.23
GYPB-207ENST00000506679 PLSCR2Q9NRY7 297 aa7.35□□□□□ -1.23
GYPB-207ENST00000506679 C3orf67Q6ZVT6 689 aa7.34□□□□□ -1.23
GYPB-207ENST00000506679 C2orf72A6NCS6 295 aa7.33□□□□□ -1.24
GYPB-207ENST00000506679 FOXK1P85037 733 aa7.33□□□□□ -1.24
GYPB-207ENST00000506679 DDX27Q96GQ7 796 aaKnown RBP7.33□□□□□ -1.24
GYPB-207ENST00000506679 LARP6Q9BRS8 491 aaKnown RBP7.33□□□□□ -1.24
GYPB-207ENST00000506679 TMC2Q8TDI7 906 aa7.32□□□□□ -1.24
GYPB-207ENST00000506679 CAMK2BQ13554 666 aa7.31□□□□□ -1.24
GYPB-207ENST00000506679 DSG2Q14126 1118 aa7.31□□□□□ -1.24
GYPB-207ENST00000506679 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.31□□□□□ -1.24
GYPB-207ENST00000506679 PPP1R15BQ5SWA1 713 aa7.3□□□□□ -1.24
GYPB-207ENST00000506679 MAMSTRQ6ZN01 415 aa7.3□□□□□ -1.24
GYPB-207ENST00000506679 WDR70Q9NW82 654 aa7.3□□□□□ -1.24
GYPB-207ENST00000506679 KCNV2Q8TDN2 545 aa7.28□□□□□ -1.24
GYPB-207ENST00000506679 SCUBE2Q9NQ36 999 aa7.28□□□□□ -1.24
GYPB-207ENST00000506679 E2F4Q16254 413 aa7.27□□□□□ -1.25
GYPB-207ENST00000506679 P3H3Q8IVL6 736 aa7.27□□□□□ -1.25
GYPB-207ENST00000506679 PLPP6Q8IY26 295 aa7.27□□□□□ -1.25
GYPB-207ENST00000506679 OTUD5Q96G74 571 aa7.27□□□□□ -1.25
GYPB-207ENST00000506679 ARIH1Q9Y4X5 557 aaPredicted RBP7.27□□□□□ -1.25
GYPB-207ENST00000506679 EMILIN3Q9NT22 766 aa7.24□□□□□ -1.25
GYPB-207ENST00000506679 SLC34A2O95436 690 aa7.23□□□□□ -1.25
GYPB-207ENST00000506679 SLAIN1Q8ND83 568 aa7.23□□□□□ -1.25
GYPB-207ENST00000506679 ARHGEF1Q92888 912 aaKnown RBP7.23□□□□□ -1.25
GYPB-207ENST00000506679 OXER1Q8TDS5 423 aa7.21□□□□□ -1.26
GYPB-207ENST00000506679 HOXB3P14651 431 aaPredicted RBP7.2□□□□□ -1.26
GYPB-207ENST00000506679 PTCD2Q8WV60 388 aaKnown RBP7.19□□□□□ -1.26
GYPB-207ENST00000506679 BCANQ96GW7 911 aa7.17□□□□□ -1.26
GYPB-207ENST00000506679 DPYSL4O14531 572 aa7.16□□□□□ -1.26
GYPB-207ENST00000506679 PDIA6Q15084 440 aa7.16□□□□□ -1.26
GYPB-207ENST00000506679 DOK7Q18PE1 504 aa7.15□□□□□ -1.26
GYPB-207ENST00000506679 KDM4FA0A1W2PPD8 638 aa7.14□□□□□ -1.27
GYPB-207ENST00000506679 UPF1Q92900 1129 aaKnown RBP eCLIP7.14□□□□□ -1.27
GYPB-207ENST00000506679 ZSWIM6Q9HCJ5 1215 aa7.14□□□□□ -1.27
GYPB-207ENST00000506679 PCDHGA4Q9Y5G9 962 aa7.14□□□□□ -1.27
GYPB-207ENST00000506679 SPDYE16A6NNV3 312 aaPredicted RBP7.13□□□□□ -1.27
GYPB-207ENST00000506679 NBR1Q14596 966 aa7.13□□□□□ -1.27
GYPB-207ENST00000506679 TESPA1A2RU30 521 aaPredicted RBP7.12□□□□□ -1.27
GYPB-207ENST00000506679 SNPHO15079 494 aa7.12□□□□□ -1.27
GYPB-207ENST00000506679 MAP3K9P80192 1104 aa7.12□□□□□ -1.27
GYPB-207ENST00000506679 GPR153Q6NV75 609 aa7.12□□□□□ -1.27
GYPB-207ENST00000506679 POTEMA6NI47 508 aa7.11□□□□□ -1.27
GYPB-207ENST00000506679 SEMA3EO15041 775 aa7.11□□□□□ -1.27
GYPB-207ENST00000506679 PTGER2P43116 358 aa7.11□□□□□ -1.27
GYPB-207ENST00000506679 ANO8Q9HCE9 1232 aaPredicted RBP7.11□□□□□ -1.27
GYPB-207ENST00000506679 RIMBP2O15034 1052 aa7.1□□□□□ -1.27
GYPB-207ENST00000506679 TBC1D12O60347 775 aa7.1□□□□□ -1.27
GYPB-207ENST00000506679 EVI5O60447 810 aa7.1□□□□□ -1.27
GYPB-207ENST00000506679 ARSIQ5FYB1 569 aa7.08□□□□□ -1.28
GYPB-207ENST00000506679 HOXB1P14653 301 aaPredicted RBP7.07□□□□□ -1.28
GYPB-207ENST00000506679 MLLT3P42568 568 aaPredicted RBP7.07□□□□□ -1.28
GYPB-207ENST00000506679 POTEGQ6S5H5 508 aa7.07□□□□□ -1.28
GYPB-207ENST00000506679 ZNF710Q8N1W2 664 aa7.07□□□□□ -1.28
GYPB-207ENST00000506679 KHSRPQ92945 711 aaKnown RBP eCLIP7.07□□□□□ -1.283e-6■■■□□ 17.7
GYPB-207ENST00000506679 NUDT7P0C024 238 aa7.05□□□□□ -1.28
GYPB-207ENST00000506679 ZNF316A6NFI3 1004 aaPredicted RBP7.04□□□□□ -1.28
GYPB-207ENST00000506679 ST18O60284 1047 aa7.04□□□□□ -1.28
GYPB-207ENST00000506679 LCE2DQ5TA82 110 aaPredicted RBP7.04□□□□□ -1.28
GYPB-207ENST00000506679 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.03□□□□□ -1.28
GYPB-207ENST00000506679 JPH4Q96JJ6 628 aa7.03□□□□□ -1.28
GYPB-207ENST00000506679 PHF14O94880 888 aa7.02□□□□□ -1.29
GYPB-207ENST00000506679 OSBPP22059 807 aa7.02□□□□□ -1.29
GYPB-207ENST00000506679 FOSBP53539 338 aa7.02□□□□□ -1.29
GYPB-207ENST00000506679 SMYD5Q6GMV2 418 aa7.01□□□□□ -1.29
GYPB-207ENST00000506679 DDX12PQ92771 950 aa7.01□□□□□ -1.29
GYPB-207ENST00000506679 LHX6Q9UPM6 363 aa7.01□□□□□ -1.29
GYPB-207ENST00000506679 PCDHGA10Q9Y5H3 936 aa7.01□□□□□ -1.29
GYPB-207ENST00000506679 PRIM1P49642 420 aaKnown RBP7□□□□□ -1.29
GYPB-207ENST00000506679 PCDH10Q9P2E7 1040 aa7□□□□□ -1.29
GYPB-207ENST00000506679 GRXCR2A6NFK2 248 aa6.99□□□□□ -1.29
GYPB-207ENST00000506679 LMOD2Q6P5Q4 547 aa6.99□□□□□ -1.29
GYPB-207ENST00000506679 EPAS1Q99814 870 aa6.99□□□□□ -1.29
GYPB-207ENST00000506679 PSDA5PKW4 1024 aaPredicted RBP6.98□□□□□ -1.29
GYPB-207ENST00000506679 TULP1O00294 542 aaPredicted RBP6.98□□□□□ -1.29
GYPB-207ENST00000506679 EN1Q05925 392 aaPredicted RBP6.97□□□□□ -1.29
GYPB-207ENST00000506679 TYW1BQ6NUM6 668 aa6.97□□□□□ -1.29
GYPB-207ENST00000506679 ZNF454Q8N9F8 522 aa6.97□□□□□ -1.29
GYPB-207ENST00000506679 FBXW7Q969H0 707 aa6.97□□□□□ -1.29
GYPB-207ENST00000506679 RBM26Q5T8P6 1007 aaKnown RBP6.96□□□□□ -1.3
GYPB-207ENST00000506679 FAM163AQ96GL9 167 aaPredicted RBP6.96□□□□□ -1.3
GYPB-207ENST00000506679 GPR37O15354 613 aa6.95□□□□□ -1.3
GYPB-207ENST00000506679 EMP3P54852 163 aa6.95□□□□□ -1.3
GYPB-207ENST00000506679 ZDHHC16Q969W1 377 aa6.95□□□□□ -1.3
GYPB-207ENST00000506679 MARVELD3Q96A59 401 aa6.95□□□□□ -1.3
GYPB-207ENST00000506679 PPP4R3BQ5MIZ7 849 aa6.94□□□□□ -1.3
GYPB-207ENST00000506679 ADAM33Q9BZ11 813 aa6.94□□□□□ -1.3
GYPB-207ENST00000506679 POTEB3A0JP26 581 aa6.93□□□□□ -1.3
GYPB-207ENST00000506679 POTEBQ6S5H4 581 aa6.93□□□□□ -1.3
GYPB-207ENST00000506679 BCL2L12Q9HB09 334 aa6.93□□□□□ -1.3
GYPB-207ENST00000506679 VARS2Q5ST30 1063 aaKnown RBP6.92□□□□□ -1.3
GYPB-207ENST00000506679 GPIHBP1Q8IV16 184 aa6.92□□□□□ -1.3
GYPB-207ENST00000506679 ZC3H15Q8WU90 426 aaKnown RBP6.92□□□□□ -1.3
GYPB-207ENST00000506679 ERBB3P21860 1342 aa6.92□□□□□ -1.3
GYPB-207ENST00000506679 MAP3K7O43318 606 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms