RNA–Protein interactions for RNA: ENST00000506552.1

PACRGL-213, Transcript of parkin coregulated like, humanhuman

TSL 3

Gene PACRGL, Length 414 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-213ENST00000506552 NLRP6P59044 892 aa11.31□□□□□ -0.6
PACRGL-213ENST00000506552 POTEBQ6S5H4 581 aa11.31□□□□□ -0.6
PACRGL-213ENST00000506552 MS4A4AQ96JQ5 239 aa11.3□□□□□ -0.6
PACRGL-213ENST00000506552 KRTAP3-3Q9BYR6 98 aa11.29□□□□□ -0.6
PACRGL-213ENST00000506552 KRTAP3-2Q9BYR7 98 aa11.29□□□□□ -0.6
PACRGL-213ENST00000506552 ZSWIM6Q9HCJ5 1215 aa11.27□□□□□ -0.61
PACRGL-213ENST00000506552 ERBB3P21860 1342 aa11.26□□□□□ -0.61
PACRGL-213ENST00000506552 TMEM92Q6UXU6 159 aa11.25□□□□□ -0.61
PACRGL-213ENST00000506552 FBXO22Q8NEZ5 403 aa11.25□□□□□ -0.61
PACRGL-213ENST00000506552 MFRPQ9BY79 579 aa11.25□□□□□ -0.61
PACRGL-213ENST00000506552 HS6ST3Q8IZP7 471 aa11.2□□□□□ -0.62
PACRGL-213ENST00000506552 CHGAP10645 457 aaKnown RBP11.19□□□□□ -0.62
PACRGL-213ENST00000506552 VARS2Q5ST30 1063 aaKnown RBP11.17□□□□□ -0.62
PACRGL-213ENST00000506552 GPR153Q6NV75 609 aa11.15□□□□□ -0.62
PACRGL-213ENST00000506552 ZNF687Q8N1G0 1237 aa11.12□□□□□ -0.63
PACRGL-213ENST00000506552 DCAF8L2P0C7V8 631 aa11.1□□□□□ -0.63
PACRGL-213ENST00000506552 PPP1R37O75864 691 aa11.09□□□□□ -0.63
PACRGL-213ENST00000506552 ARSIQ5FYB1 569 aa11.08□□□□□ -0.64
PACRGL-213ENST00000506552 KIF3CO14782 793 aa11.06□□□□□ -0.64
PACRGL-213ENST00000506552 DNAJC5Q9H3Z4 198 aa11.05□□□□□ -0.64
PACRGL-213ENST00000506552 C2orf72A6NCS6 295 aa11.04□□□□□ -0.64
PACRGL-213ENST00000506552 RNF166Q96A37 237 aaPredicted RBP11.04□□□□□ -0.64
PACRGL-213ENST00000506552 ZNF316A6NFI3 1004 aaPredicted RBP11.03□□□□□ -0.64
PACRGL-213ENST00000506552 PTGER2P43116 358 aa11.03□□□□□ -0.64
PACRGL-213ENST00000506552 NKX1-1Q15270 411 aaPredicted RBP11.03□□□□□ -0.64
PACRGL-213ENST00000506552 TMC2Q8TDI7 906 aa11.01□□□□□ -0.65
PACRGL-213ENST00000506552 MYT1LQ9UL68 1186 aa11.01□□□□□ -0.65
PACRGL-213ENST00000506552 RYDENQ9NUL5 291 aaKnown RBP11□□□□□ -0.65
PACRGL-213ENST00000506552 SLC34A2O95436 690 aa10.99□□□□□ -0.65
PACRGL-213ENST00000506552 KHSRPQ92945 711 aaKnown RBP eCLIP10.99□□□□□ -0.65
PACRGL-213ENST00000506552 AMER1Q5JTC6 1135 aaPredicted RBP10.96□□□□□ -0.65
PACRGL-213ENST00000506552 NUDT7P0C024 238 aa10.95□□□□□ -0.66
PACRGL-213ENST00000506552 PCDHGA4Q9Y5G9 962 aa10.95□□□□□ -0.66
PACRGL-213ENST00000506552 PBX2P40425 430 aa10.94□□□□□ -0.66
PACRGL-213ENST00000506552 ANKRD13DQ6ZTN6 518 aa10.93□□□□□ -0.66
PACRGL-213ENST00000506552 LSM11P83369 360 aaKnown RBP eCLIP10.92□□□□□ -0.66
PACRGL-213ENST00000506552 GTPBP6O43824 516 aaPredicted RBP10.9□□□□□ -0.66
PACRGL-213ENST00000506552 LHX6Q9UPM6 363 aa10.9□□□□□ -0.66
PACRGL-213ENST00000506552 RTN4Q9NQC3 1192 aaKnown RBP10.89□□□□□ -0.67
PACRGL-213ENST00000506552 PSDA5PKW4 1024 aaPredicted RBP10.88□□□□□ -0.67
PACRGL-213ENST00000506552 GPHNQ9NQX3 736 aaPredicted RBP10.88□□□□□ -0.67
PACRGL-213ENST00000506552 FOXK1P85037 733 aa10.84□□□□□ -0.67
PACRGL-213ENST00000506552 PLPP6Q8IY26 295 aa10.84□□□□□ -0.67
PACRGL-213ENST00000506552 PTCD2Q8WV60 388 aaKnown RBP10.84□□□□□ -0.67
PACRGL-213ENST00000506552 DSG2Q14126 1118 aa10.81□□□□□ -0.68
PACRGL-213ENST00000506552 POTEEQ6S8J3 1075 aa10.81□□□□□ -0.68
PACRGL-213ENST00000506552 BBXQ8WY36 941 aaPredicted RBP10.8□□□□□ -0.68
PACRGL-213ENST00000506552 AXIN2Q9Y2T1 843 aa10.8□□□□□ -0.68
PACRGL-213ENST00000506552 ARHGAP33O14559 1287 aa10.79□□□□□ -0.68
PACRGL-213ENST00000506552 PDE4AP27815 886 aa10.79□□□□□ -0.68
PACRGL-213ENST00000506552 KDM4FA0A1W2PPD8 638 aa10.78□□□□□ -0.68
PACRGL-213ENST00000506552 TBC1D12O60347 775 aa10.78□□□□□ -0.68
PACRGL-213ENST00000506552 CRISPLD2Q9H0B8 497 aa10.78□□□□□ -0.68
PACRGL-213ENST00000506552 ADGRD1Q6QNK2 874 aa10.75□□□□□ -0.69
PACRGL-213ENST00000506552 NCKAP5LQ9HCH0 1330 aa10.75□□□□□ -0.69
PACRGL-213ENST00000506552 PPP4R3BQ5MIZ7 849 aa10.74□□□□□ -0.69
PACRGL-213ENST00000506552 PPP1R15BQ5SWA1 713 aa10.74□□□□□ -0.69
PACRGL-213ENST00000506552 TK2O00142 265 aa10.73□□□□□ -0.69
PACRGL-213ENST00000506552 LARP6Q9BRS8 491 aaKnown RBP10.73□□□□□ -0.69
PACRGL-213ENST00000506552 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.72□□□□□ -0.69
PACRGL-213ENST00000506552 HCSTQ9UBK5 93 aa10.7□□□□□ -0.7
PACRGL-213ENST00000506552 SPRYD3Q8NCJ5 442 aa10.69□□□□□ -0.7
PACRGL-213ENST00000506552 DDX27Q96GQ7 796 aaKnown RBP10.69□□□□□ -0.7
PACRGL-213ENST00000506552 KCNH8Q96L42 1107 aa10.69□□□□□ -0.7
PACRGL-213ENST00000506552 CADPS2Q86UW7 1296 aa10.68□□□□□ -0.7
PACRGL-213ENST00000506552 UPF1Q92900 1129 aaKnown RBP eCLIP10.68□□□□□ -0.7
PACRGL-213ENST00000506552 PSEN2P49810 448 aa10.67□□□□□ -0.7
PACRGL-213ENST00000506552 OXER1Q8TDS5 423 aa10.67□□□□□ -0.7
PACRGL-213ENST00000506552 DMRTA1Q5VZB9 504 aa10.66□□□□□ -0.7
PACRGL-213ENST00000506552 HRO43593 1189 aa10.65□□□□□ -0.7
PACRGL-213ENST00000506552 MFSD10Q14728 455 aa10.65□□□□□ -0.7
PACRGL-213ENST00000506552 STAC3Q96MF2 364 aa10.63□□□□□ -0.71
PACRGL-213ENST00000506552 PAXIP1Q6ZW49 1069 aaPredicted RBP10.62□□□□□ -0.71
PACRGL-213ENST00000506552 CFAP44Q96MT7 982 aa10.62□□□□□ -0.71
PACRGL-213ENST00000506552 PLA2G2EQ9NZK7 142 aa10.62□□□□□ -0.71
PACRGL-213ENST00000506552 KCNK17Q96T54 332 aa10.61□□□□□ -0.71
PACRGL-213ENST00000506552 ZNF454Q8N9F8 522 aa10.59□□□□□ -0.71
PACRGL-213ENST00000506552 MAP3K9P80192 1104 aa10.58□□□□□ -0.72
PACRGL-213ENST00000506552 BCL2L12Q9HB09 334 aa10.57□□□□□ -0.72
PACRGL-213ENST00000506552 EVI5O60447 810 aa10.56□□□□□ -0.72
PACRGL-213ENST00000506552 KCTD12Q96CX2 325 aaKnown RBP10.56□□□□□ -0.72
PACRGL-213ENST00000506552 EMILIN3Q9NT22 766 aa10.56□□□□□ -0.72
PACRGL-213ENST00000506552 SLC4A5Q9BY07 1137 aa10.55□□□□□ -0.72
PACRGL-213ENST00000506552 VPS9D1Q9Y2B5 631 aa10.55□□□□□ -0.72
PACRGL-213ENST00000506552 FOSBP53539 338 aa10.54□□□□□ -0.72
PACRGL-213ENST00000506552 PTPREP23469 700 aa10.53□□□□□ -0.72
PACRGL-213ENST00000506552 JPH4Q96JJ6 628 aa10.53□□□□□ -0.72
PACRGL-213ENST00000506552 ANO8Q9HCE9 1232 aaPredicted RBP10.53□□□□□ -0.72
PACRGL-213ENST00000506552 CAMK2BQ13554 666 aa10.51□□□□□ -0.73
PACRGL-213ENST00000506552 ZDHHC16Q969W1 377 aa10.48□□□□□ -0.73
PACRGL-213ENST00000506552 ZBED2Q9BTP6 218 aa10.46□□□□□ -0.73
PACRGL-213ENST00000506552 BHMG1C9JSJ3 638 aaPredicted RBP10.45□□□□□ -0.74
PACRGL-213ENST00000506552 DPYSL4O14531 572 aa10.45□□□□□ -0.74
PACRGL-213ENST00000506552 WDR70Q9NW82 654 aa10.45□□□□□ -0.74
PACRGL-213ENST00000506552 GOLGA8CPA6NN73 597 aa10.44□□□□□ -0.74
PACRGL-213ENST00000506552 PTPN5P54829 565 aa10.43□□□□□ -0.74
PACRGL-213ENST00000506552 MRPL50Q8N5N7 158 aaKnown RBP10.43□□□□□ -0.74
PACRGL-213ENST00000506552 ADAM33Q9BZ11 813 aa10.43□□□□□ -0.74
PACRGL-213ENST00000506552 NBPF3Q9H094 633 aa10.43□□□□□ -0.74
PACRGL-213ENST00000506552 THSD4Q6ZMP0 1018 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms