RNA–Protein interactions for RNA: ENST00000506542.1

SERF1B-204, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 3 BASIC

Gene SERF1B, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-204ENST00000506542 PHLDB1Q86UU1 1377 aa21.64■■□□□ 1.05
SERF1B-204ENST00000506542 EHBP1L1Q8N3D4 1523 aa21.64■■□□□ 1.05
SERF1B-204ENST00000506542 DENND4BO75064 1496 aaPredicted RBP21.63■■□□□ 1.05
SERF1B-204ENST00000506542 SCAPERQ9BY12 1400 aa21.63■■□□□ 1.05
SERF1B-204ENST00000506542 EFCAB2Q5VUJ9 269 aa21.63■■□□□ 1.05
SERF1B-204ENST00000506542 KANK4Q5T7N3 995 aaPredicted RBP21.62■■□□□ 1.05
SERF1B-204ENST00000506542 GPATCH8Q9UKJ3 1502 aaKnown RBP21.61■■□□□ 1.05
SERF1B-204ENST00000506542 ZNF777Q9ULD5 760 aaPredicted RBP21.6■■□□□ 1.05
SERF1B-204ENST00000506542 ARHGEF12Q9NZN5 1544 aa21.59■■□□□ 1.05
SERF1B-204ENST00000506542 SAMD9LQ8IVG5 1584 aa21.57■■□□□ 1.04
SERF1B-204ENST00000506542 KDM4FA0A1W2PPD8 638 aa21.57■■□□□ 1.04
SERF1B-204ENST00000506542 CCNB3Q8WWL7 1395 aa21.57■■□□□ 1.04
SERF1B-204ENST00000506542 POGZQ7Z3K3 1410 aa21.57■■□□□ 1.04
SERF1B-204ENST00000506542 LRRC9Q6ZRR7 1453 aa21.57■■□□□ 1.04
SERF1B-204ENST00000506542 SUPT6HQ7KZ85 1726 aaKnown RBP21.56■■□□□ 1.04
SERF1B-204ENST00000506542 NCOA2Q15596 1464 aa21.56■■□□□ 1.04
SERF1B-204ENST00000506542 AFAP1Q8N556 730 aa21.55■■□□□ 1.04
SERF1B-204ENST00000506542 YEATS2Q9ULM3 1422 aa21.55■■□□□ 1.04
SERF1B-204ENST00000506542 ABCC1P33527 1531 aa21.55■■□□□ 1.04
SERF1B-204ENST00000506542 ITSN2Q9NZM3 1697 aa21.54■■□□□ 1.04
SERF1B-204ENST00000506542 SIGLEC1Q9BZZ2 1709 aa21.53■■□□□ 1.04
SERF1B-204ENST00000506542 TRAPPC8Q9Y2L5 1435 aa21.53■■□□□ 1.04
SERF1B-204ENST00000506542 ZNF644Q9H582 1327 aaPredicted RBP21.53■■□□□ 1.04
SERF1B-204ENST00000506542 ZMYM4Q5VZL5 1548 aa21.52■■□□□ 1.04
SERF1B-204ENST00000506542 ARHGEF40Q8TER5 1519 aa21.52■■□□□ 1.04
SERF1B-204ENST00000506542 CFDP1Q9UEE9 299 aaPredicted RBP21.51■■□□□ 1.03
SERF1B-204ENST00000506542 SYCP2Q9BX26 1530 aa21.51■■□□□ 1.03
SERF1B-204ENST00000506542 MAP3K1Q13233 1512 aa21.49■■□□□ 1.03
SERF1B-204ENST00000506542 ZFYVE16Q7Z3T8 1539 aa21.49■■□□□ 1.03
SERF1B-204ENST00000506542 HNRNPMP52272 730 aaKnown RBP eCLIP21.49■■□□□ 1.03
SERF1B-204ENST00000506542 ZNF518AQ6AHZ1 1483 aa21.48■■□□□ 1.03
SERF1B-204ENST00000506542 AEBP2Q6ZN18 517 aaPredicted RBP21.47■■□□□ 1.03
SERF1B-204ENST00000506542 KDM5CP41229 1560 aa21.47■■□□□ 1.03
SERF1B-204ENST00000506542 APLP2Q06481 763 aa21.44■■□□□ 1.02
SERF1B-204ENST00000506542 PPARGC1BQ86YN6 1023 aaKnown RBP21.44■■□□□ 1.02
SERF1B-204ENST00000506542 MYT1LQ9UL68 1186 aa21.44■■□□□ 1.02
SERF1B-204ENST00000506542 HECW2Q9P2P5 1572 aa21.43■■□□□ 1.02
SERF1B-204ENST00000506542 ARID4BQ4LE39 1312 aaPredicted RBP21.42■■□□□ 1.02
SERF1B-204ENST00000506542 TRIM26Q12899 539 aaPredicted RBP21.42■■□□□ 1.02
SERF1B-204ENST00000506542 ABCA6Q8N139 1617 aa21.42■■□□□ 1.02
SERF1B-204ENST00000506542 KIDINS220Q9ULH0 1771 aa21.41■■□□□ 1.02
SERF1B-204ENST00000506542 CAMSAP2Q08AD1 1489 aa21.4■■□□□ 1.02
SERF1B-204ENST00000506542 MAGI2Q86UL8 1455 aa21.4■■□□□ 1.02
SERF1B-204ENST00000506542 DIP2CQ9Y2E4 1556 aa21.39■■□□□ 1.02
SERF1B-204ENST00000506542 BCORL1Q5H9F3 1711 aa21.37■■□□□ 1.01
SERF1B-204ENST00000506542 MBD5Q9P267 1494 aa21.36■■□□□ 1.01
SERF1B-204ENST00000506542 KIAA1107Q9UPP5 1409 aa21.36■■□□□ 1.01
SERF1B-204ENST00000506542 ATP10AO60312 1499 aa21.36■■□□□ 1.01
SERF1B-204ENST00000506542 MLECQ14165 292 aa21.35■■□□□ 1.01
SERF1B-204ENST00000506542 MLH3Q9UHC1 1453 aa21.35■■□□□ 1.01
SERF1B-204ENST00000506542 ADAMTSL3P82987 1691 aa21.35■■□□□ 1.01
SERF1B-204ENST00000506542 PLEKHH2Q8IVE3 1493 aa21.34■■□□□ 1.01
SERF1B-204ENST00000506542 MYOM3Q5VTT5 1437 aa21.34■■□□□ 1.01
SERF1B-204ENST00000506542 PCGF6Q9BYE7 350 aa21.34■■□□□ 1.01
SERF1B-204ENST00000506542 MADDQ8WXG6 1647 aa21.34■■□□□ 1.01
SERF1B-204ENST00000506542 C9orf84Q5VXU9 1444 aa21.32■■□□□ 1
SERF1B-204ENST00000506542 SPAG9O60271 1321 aaKnown RBP21.32■■□□□ 1
SERF1B-204ENST00000506542 INO80Q9ULG1 1556 aaPredicted RBP21.32■■□□□ 1
SERF1B-204ENST00000506542 ATP7AQ04656 1500 aa21.31■■□□□ 1
SERF1B-204ENST00000506542 RIMS1Q86UR5 1692 aaKnown RBP21.28■■□□□ 1
SERF1B-204ENST00000506542 PTPN23Q9H3S7 1636 aa21.26■□□□□ 0.99
SERF1B-204ENST00000506542 PLPPR3Q6T4P5 718 aa21.26■□□□□ 0.99
SERF1B-204ENST00000506542 CCDC141Q6ZP82 1450 aa21.26■□□□□ 0.99
SERF1B-204ENST00000506542 FER1L4A9Z1Z3 1794 aa21.24■□□□□ 0.99
SERF1B-204ENST00000506542 MIA2Q96PC5 1412 aa21.24■□□□□ 0.99
SERF1B-204ENST00000506542 ARHGEF5Q12774 1597 aa21.23■□□□□ 0.99
SERF1B-204ENST00000506542 ADGBQ8N7X0 1667 aa21.23■□□□□ 0.99
SERF1B-204ENST00000506542 FGD6Q6ZV73 1430 aa21.23■□□□□ 0.99
SERF1B-204ENST00000506542 REREQ9P2R6 1566 aa21.22■□□□□ 0.99
SERF1B-204ENST00000506542 PTPRMP28827 1452 aa21.22■□□□□ 0.99
SERF1B-204ENST00000506542 A2MP01023 1474 aa21.19■□□□□ 0.98
SERF1B-204ENST00000506542 PLXNC1O60486 1568 aa21.19■□□□□ 0.98
SERF1B-204ENST00000506542 AGLP35573 1532 aa21.16■□□□□ 0.98
SERF1B-204ENST00000506542 CROCC2H7BZ55 1655 aa21.15■□□□□ 0.98
SERF1B-204ENST00000506542 TCOF1Q13428 1488 aaKnown RBP21.15■□□□□ 0.98
SERF1B-204ENST00000506542 RTEL1-TNFRSF6BF6WH68 1400 aa21.15■□□□□ 0.98
SERF1B-204ENST00000506542 ABCC5O15440 1437 aa21.14■□□□□ 0.97
SERF1B-204ENST00000506542 TSPY4P0CV99 314 aa21.14■□□□□ 0.97
SERF1B-204ENST00000506542 TSPY10P0CW01 314 aa21.14■□□□□ 0.97
SERF1B-204ENST00000506542 CEBPAP49715 358 aaPredicted RBP21.13■□□□□ 0.97
SERF1B-204ENST00000506542 FAM50AQ14320 339 aaKnown RBP21.13■□□□□ 0.97
SERF1B-204ENST00000506542 DNMT1P26358 1616 aaKnown RBP21.13■□□□□ 0.97
SERF1B-204ENST00000506542 MAST1Q9Y2H9 1570 aa21.12■□□□□ 0.97
SERF1B-204ENST00000506542 RSPH4AQ5TD94 716 aa21.12■□□□□ 0.97
SERF1B-204ENST00000506542 DAPK1P53355 1430 aa21.11■□□□□ 0.97
SERF1B-204ENST00000506542 CHIC2Q9UKJ5 165 aa21.11■□□□□ 0.97
SERF1B-204ENST00000506542 GGT6Q6P531 493 aa21.09■□□□□ 0.97
SERF1B-204ENST00000506542 DHX29Q7Z478 1369 aaKnown RBP21.08■□□□□ 0.97
SERF1B-204ENST00000506542 CLTCQ00610 1675 aaKnown RBP21.07■□□□□ 0.96
SERF1B-204ENST00000506542 C3P01024 1663 aa21.06■□□□□ 0.96
SERF1B-204ENST00000506542 KIF3BO15066 747 aa21.05■□□□□ 0.96
SERF1B-204ENST00000506542 RRP7BPQ9NSQ0 103 aa21.05■□□□□ 0.96
SERF1B-204ENST00000506542 RRBP1Q9P2E9 1410 aaKnown RBP21.05■□□□□ 0.96
SERF1B-204ENST00000506542 SHANK2Q9UPX8 1470 aa21.03■□□□□ 0.96
SERF1B-204ENST00000506542 PTPRKQ15262 1439 aa21.02■□□□□ 0.96
SERF1B-204ENST00000506542 KIF15Q9NS87 1388 aa21.01■□□□□ 0.95
SERF1B-204ENST00000506542 ITGAEP38570 1179 aa21.01■□□□□ 0.95
SERF1B-204ENST00000506542 ESF1Q9H501 851 aaKnown RBP21.01■□□□□ 0.95
SERF1B-204ENST00000506542 LMTK3Q96Q04 1460 aa20.97■□□□□ 0.95
SERF1B-204ENST00000506542 DUOX2Q9NRD8 1548 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms