RNA–Protein interactions for RNA: ENST00000506401.6

ITGA3-207, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 1,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-207ENST00000506401 CAMSAP2Q08AD1 1489 aa26.73■■□□□ 1.87
ITGA3-207ENST00000506401 ARHGAP5Q13017 1502 aa26.68■■□□□ 1.86
ITGA3-207ENST00000506401 PLCH2O75038 1416 aa26.68■■□□□ 1.86
ITGA3-207ENST00000506401 PTPRKQ15262 1439 aa26.68■■□□□ 1.86
ITGA3-207ENST00000506401 DNMT1P26358 1616 aaKnown RBP26.67■■□□□ 1.86
ITGA3-207ENST00000506401 ABCA9Q8IUA7 1624 aa26.66■■□□□ 1.86
ITGA3-207ENST00000506401 DAPK1P53355 1430 aa26.65■■□□□ 1.86
ITGA3-207ENST00000506401 MAPKBP1O60336 1514 aa26.65■■□□□ 1.86
ITGA3-207ENST00000506401 SETD5Q9C0A6 1442 aa26.64■■□□□ 1.86
ITGA3-207ENST00000506401 EFCAB2Q5VUJ9 269 aa26.63■■□□□ 1.85
ITGA3-207ENST00000506401 ABCC5O15440 1437 aa26.63■■□□□ 1.85
ITGA3-207ENST00000506401 ARAP3Q8WWN8 1544 aa26.61■■□□□ 1.85
ITGA3-207ENST00000506401 CCER1Q8TC90 406 aaPredicted RBP26.61■■□□□ 1.85
ITGA3-207ENST00000506401 SAMD9LQ8IVG5 1584 aa26.61■■□□□ 1.85
ITGA3-207ENST00000506401 CHIC2Q9UKJ5 165 aa26.6■■□□□ 1.85
ITGA3-207ENST00000506401 PLEKHH2Q8IVE3 1493 aa26.58■■□□□ 1.85
ITGA3-207ENST00000506401 RSPH4AQ5TD94 716 aa26.57■■□□□ 1.84
ITGA3-207ENST00000506401 RAB3GAP2Q9H2M9 1393 aa26.57■■□□□ 1.84
ITGA3-207ENST00000506401 HFM1A2PYH4 1435 aa26.57■■□□□ 1.84
ITGA3-207ENST00000506401 HNRNPMP52272 730 aaKnown RBP eCLIP26.56■■□□□ 1.84
ITGA3-207ENST00000506401 HRCP23327 699 aa26.55■■□□□ 1.84
ITGA3-207ENST00000506401 ARHGEF5Q12774 1597 aa26.55■■□□□ 1.84
ITGA3-207ENST00000506401 CROCC2H7BZ55 1655 aa26.55■■□□□ 1.84
ITGA3-207ENST00000506401 AKNAQ7Z591 1439 aa26.54■■□□□ 1.84
ITGA3-207ENST00000506401 ROCK1Q13464 1354 aa26.54■■□□□ 1.84
ITGA3-207ENST00000506401 KIAA1107Q9UPP5 1409 aa26.54■■□□□ 1.84
ITGA3-207ENST00000506401 MBD5Q9P267 1494 aa26.52■■□□□ 1.84
ITGA3-207ENST00000506401 TSPY4P0CV99 314 aa26.52■■□□□ 1.84
ITGA3-207ENST00000506401 TSPY10P0CW01 314 aa26.52■■□□□ 1.84
ITGA3-207ENST00000506401 RRP7BPQ9NSQ0 103 aa26.52■■□□□ 1.84
ITGA3-207ENST00000506401 NAIPQ13075 1403 aa26.52■■□□□ 1.84
ITGA3-207ENST00000506401 CD109Q6YHK3 1445 aa26.51■■□□□ 1.83
ITGA3-207ENST00000506401 SYCP2Q9BX26 1530 aa26.5■■□□□ 1.83
ITGA3-207ENST00000506401 ADGBQ8N7X0 1667 aa26.49■■□□□ 1.83
ITGA3-207ENST00000506401 FANCAO15360 1455 aa26.49■■□□□ 1.83
ITGA3-207ENST00000506401 CCDC141Q6ZP82 1450 aa26.49■■□□□ 1.83
ITGA3-207ENST00000506401 SHANK2Q9UPX8 1470 aa26.49■■□□□ 1.83
ITGA3-207ENST00000506401 GCC2Q8IWJ2 1684 aa26.48■■□□□ 1.83
ITGA3-207ENST00000506401 ZEB1P37275 1124 aaPredicted RBP26.46■■□□□ 1.83
ITGA3-207ENST00000506401 GLI2P10070 1586 aa26.46■■□□□ 1.83
ITGA3-207ENST00000506401 ABCC1P33527 1531 aa26.45■■□□□ 1.83
ITGA3-207ENST00000506401 ADGRL2O95490 1459 aa26.45■■□□□ 1.82
ITGA3-207ENST00000506401 ANKRD30AQ9BXX3 1397 aa26.45■■□□□ 1.82
ITGA3-207ENST00000506401 C9orf84Q5VXU9 1444 aa26.45■■□□□ 1.82
ITGA3-207ENST00000506401 NCOA1Q15788 1441 aa26.44■■□□□ 1.82
ITGA3-207ENST00000506401 ARHGEF12Q9NZN5 1544 aa26.42■■□□□ 1.82
ITGA3-207ENST00000506401 CFAP74Q9C0B2 1584 aa26.42■■□□□ 1.82
ITGA3-207ENST00000506401 FAM69CQ0P6D2 419 aa26.4■■□□□ 1.82
ITGA3-207ENST00000506401 DHX57Q6P158 1386 aaKnown RBP26.4■■□□□ 1.82
ITGA3-207ENST00000506401 MAP3K4Q9Y6R4 1608 aa26.39■■□□□ 1.82
ITGA3-207ENST00000506401 DIP2BQ9P265 1576 aa26.39■■□□□ 1.81
ITGA3-207ENST00000506401 ACIN1Q9UKV3 1341 aaKnown RBP26.38■■□□□ 1.81
ITGA3-207ENST00000506401 MAST1Q9Y2H9 1570 aa26.38■■□□□ 1.81
ITGA3-207ENST00000506401 ADGRL1O94910 1474 aa26.37■■□□□ 1.81
ITGA3-207ENST00000506401 SCAPERQ9BY12 1400 aa26.35■■□□□ 1.81
ITGA3-207ENST00000506401 TRAPPC8Q9Y2L5 1435 aa26.35■■□□□ 1.81
ITGA3-207ENST00000506401 DNAJC5Q9H3Z4 198 aa26.35■■□□□ 1.81
ITGA3-207ENST00000506401 CLSPNQ9HAW4 1339 aa26.33■■□□□ 1.8
ITGA3-207ENST00000506401 NEO1Q92859 1461 aa26.32■■□□□ 1.8
ITGA3-207ENST00000506401 KDM6BO15054 1643 aa26.31■■□□□ 1.8
ITGA3-207ENST00000506401 AFAP1Q8N556 730 aa26.3■■□□□ 1.8
ITGA3-207ENST00000506401 KIF15Q9NS87 1388 aa26.3■■□□□ 1.8
ITGA3-207ENST00000506401 SPAG9O60271 1321 aaKnown RBP26.29■■□□□ 1.8
ITGA3-207ENST00000506401 TRIM52Q96A61 297 aa26.27■■□□□ 1.8
ITGA3-207ENST00000506401 RTEL1-TNFRSF6BF6WH68 1400 aa26.27■■□□□ 1.8
ITGA3-207ENST00000506401 ANKRD50Q9ULJ7 1429 aa26.27■■□□□ 1.8
ITGA3-207ENST00000506401 PLXNC1O60486 1568 aa26.26■■□□□ 1.8
ITGA3-207ENST00000506401 KIF13AQ9H1H9 1805 aa26.24■■□□□ 1.79
ITGA3-207ENST00000506401 ZNF518AQ6AHZ1 1483 aa26.23■■□□□ 1.79
ITGA3-207ENST00000506401 TSPOAP1O95153 1857 aa26.23■■□□□ 1.79
ITGA3-207ENST00000506401 TEX14Q8IWB6 1497 aa26.21■■□□□ 1.79
ITGA3-207ENST00000506401 MYT1LQ9UL68 1186 aa26.19■■□□□ 1.78
ITGA3-207ENST00000506401 POGZQ7Z3K3 1410 aa26.19■■□□□ 1.78
ITGA3-207ENST00000506401 ZFYVE16Q7Z3T8 1539 aa26.19■■□□□ 1.78
ITGA3-207ENST00000506401 DUOX2Q9NRD8 1548 aa26.19■■□□□ 1.78
ITGA3-207ENST00000506401 DENND4BO75064 1496 aaPredicted RBP26.19■■□□□ 1.78
ITGA3-207ENST00000506401 ATP7AQ04656 1500 aa26.18■■□□□ 1.78
ITGA3-207ENST00000506401 INO80Q9ULG1 1556 aaPredicted RBP26.17■■□□□ 1.78
ITGA3-207ENST00000506401 PPRC1Q5VV67 1664 aaKnown RBP26.17■■□□□ 1.78
ITGA3-207ENST00000506401 KDM5CP41229 1560 aa26.14■■□□□ 1.78
ITGA3-207ENST00000506401 MPHOSPH9Q99550 1183 aa26.13■■□□□ 1.77
ITGA3-207ENST00000506401 ERBINQ96RT1 1412 aa26.12■■□□□ 1.77
ITGA3-207ENST00000506401 KIDINS220Q9ULH0 1771 aa26.11■■□□□ 1.77
ITGA3-207ENST00000506401 RAPGEF3O95398 923 aa26.1■■□□□ 1.77
ITGA3-207ENST00000506401 MLH3Q9UHC1 1453 aa26.1■■□□□ 1.77
ITGA3-207ENST00000506401 RICTORQ6R327 1708 aa26.09■■□□□ 1.77
ITGA3-207ENST00000506401 SLC4A1APQ9BWU0 796 aaKnown RBP26.08■■□□□ 1.77
ITGA3-207ENST00000506401 HECW2Q9P2P5 1572 aa26.08■■□□□ 1.77
ITGA3-207ENST00000506401 NUP155O75694 1391 aa26.07■■□□□ 1.76
ITGA3-207ENST00000506401 PZPP20742 1482 aa26.04■■□□□ 1.76
ITGA3-207ENST00000506401 DHX29Q7Z478 1369 aaKnown RBP26.04■■□□□ 1.76
ITGA3-207ENST00000506401 KDM5DQ9BY66 1539 aa26.03■■□□□ 1.76
ITGA3-207ENST00000506401 UNC13BO14795 1591 aa26.02■■□□□ 1.76
ITGA3-207ENST00000506401 TRHP20396 242 aaPredicted RBP25.99■■□□□ 1.75
ITGA3-207ENST00000506401 FRMPD1Q5SYB0 1578 aa25.99■■□□□ 1.75
ITGA3-207ENST00000506401 SIN3AQ96ST3 1273 aa25.98■■□□□ 1.75
ITGA3-207ENST00000506401 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.98■■□□□ 1.75
ITGA3-207ENST00000506401 A2MP01023 1474 aa25.97■■□□□ 1.75
ITGA3-207ENST00000506401 EIF2AK4Q9P2K8 1649 aaKnown RBP25.97■■□□□ 1.75
ITGA3-207ENST00000506401 NEUROD1Q13562 356 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms