RNA–Protein interactions for RNA: ENST00000506257.1

SV2C-203, Transcript of synaptic vesicle glycoprotein 2C, humanhuman

TSL 3

Gene SV2C, Length 437 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SV2C-203ENST00000506257 HOXB3P14651 431 aaPredicted RBP12.87□□□□□ -0.35
SV2C-203ENST00000506257 ZNF710Q8N1W2 664 aa12.85□□□□□ -0.35
SV2C-203ENST00000506257 C2orf72A6NCS6 295 aa12.84□□□□□ -0.35
SV2C-203ENST00000506257 RIMBP2O15034 1052 aa12.84□□□□□ -0.35
SV2C-203ENST00000506257 GTPBP6O43824 516 aaPredicted RBP12.84□□□□□ -0.35
SV2C-203ENST00000506257 TMC2Q8TDI7 906 aa12.84□□□□□ -0.35
SV2C-203ENST00000506257 KIF3CO14782 793 aa12.83□□□□□ -0.36
SV2C-203ENST00000506257 MARVELD3Q96A59 401 aa12.8□□□□□ -0.36
SV2C-203ENST00000506257 PCDH10Q9P2E7 1040 aa12.8□□□□□ -0.36
SV2C-203ENST00000506257 BBXQ8WY36 941 aaPredicted RBP12.78□□□□□ -0.36
SV2C-203ENST00000506257 EMP3P54852 163 aa12.77□□□□□ -0.37
SV2C-203ENST00000506257 ZSWIM6Q9HCJ5 1215 aa12.76□□□□□ -0.37
SV2C-203ENST00000506257 HOXB1P14653 301 aaPredicted RBP12.75□□□□□ -0.37
SV2C-203ENST00000506257 GPHNQ9NQX3 736 aaPredicted RBP12.72□□□□□ -0.37
SV2C-203ENST00000506257 CDAN1Q8IWY9 1227 aa12.7□□□□□ -0.38
SV2C-203ENST00000506257 FAM205CA6NFA0 338 aa12.69□□□□□ -0.38
SV2C-203ENST00000506257 FOXK1P85037 733 aa12.69□□□□□ -0.38
SV2C-203ENST00000506257 GPR153Q6NV75 609 aa12.69□□□□□ -0.38
SV2C-203ENST00000506257 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.69□□□□□ -0.38
SV2C-203ENST00000506257 ARSIQ5FYB1 569 aa12.67□□□□□ -0.38
SV2C-203ENST00000506257 SLC34A2O95436 690 aa12.66□□□□□ -0.38
SV2C-203ENST00000506257 PLPP6Q8IY26 295 aa12.66□□□□□ -0.38
SV2C-203ENST00000506257 PDE4AP27815 886 aa12.65□□□□□ -0.38
SV2C-203ENST00000506257 DSG2Q14126 1118 aa12.65□□□□□ -0.38
SV2C-203ENST00000506257 HS3ST6Q96QI5 342 aa12.65□□□□□ -0.38
SV2C-203ENST00000506257 CRISPLD2Q9H0B8 497 aa12.65□□□□□ -0.38
SV2C-203ENST00000506257 ERBB3P21860 1342 aa12.64□□□□□ -0.39
SV2C-203ENST00000506257 SPRYD3Q8NCJ5 442 aa12.64□□□□□ -0.39
SV2C-203ENST00000506257 KHSRPQ92945 711 aaKnown RBP eCLIP12.61□□□□□ -0.39
SV2C-203ENST00000506257 POTEB3A0JP26 581 aa12.6□□□□□ -0.39
SV2C-203ENST00000506257 POTEBQ6S5H4 581 aa12.6□□□□□ -0.39
SV2C-203ENST00000506257 PCDHGA4Q9Y5G9 962 aa12.6□□□□□ -0.39
SV2C-203ENST00000506257 NCKAP5LQ9HCH0 1330 aa12.6□□□□□ -0.39
SV2C-203ENST00000506257 LARP6Q9BRS8 491 aaKnown RBP12.58□□□□□ -0.4
SV2C-203ENST00000506257 PPP1R15BQ5SWA1 713 aa12.57□□□□□ -0.4
SV2C-203ENST00000506257 NUDT7P0C024 238 aa12.56□□□□□ -0.4
SV2C-203ENST00000506257 VARS2Q5ST30 1063 aaKnown RBP12.56□□□□□ -0.4
SV2C-203ENST00000506257 PAXIP1Q6ZW49 1069 aaPredicted RBP12.56□□□□□ -0.4
SV2C-203ENST00000506257 PTCD2Q8WV60 388 aaKnown RBP12.56□□□□□ -0.4
SV2C-203ENST00000506257 CFAP44Q96MT7 982 aa12.56□□□□□ -0.4
SV2C-203ENST00000506257 PLSCR2Q9NRY7 297 aa12.56□□□□□ -0.4
SV2C-203ENST00000506257 TBC1D12O60347 775 aa12.54□□□□□ -0.4
SV2C-203ENST00000506257 CADPS2Q86UW7 1296 aa12.54□□□□□ -0.4
SV2C-203ENST00000506257 DDX27Q96GQ7 796 aaKnown RBP12.54□□□□□ -0.4
SV2C-203ENST00000506257 ZNF316A6NFI3 1004 aaPredicted RBP12.53□□□□□ -0.4
SV2C-203ENST00000506257 MFSD10Q14728 455 aa12.5□□□□□ -0.41
SV2C-203ENST00000506257 ZNF687Q8N1G0 1237 aa12.48□□□□□ -0.41
SV2C-203ENST00000506257 OXER1Q8TDS5 423 aa12.48□□□□□ -0.41
SV2C-203ENST00000506257 UPF1Q92900 1129 aaKnown RBP eCLIP12.48□□□□□ -0.41
SV2C-203ENST00000506257 LHX6Q9UPM6 363 aa12.48□□□□□ -0.41
SV2C-203ENST00000506257 KRTAP3-3Q9BYR6 98 aa12.46□□□□□ -0.41
SV2C-203ENST00000506257 KRTAP3-2Q9BYR7 98 aa12.46□□□□□ -0.41
SV2C-203ENST00000506257 KDM4FA0A1W2PPD8 638 aa12.44□□□□□ -0.42
SV2C-203ENST00000506257 PSDA5PKW4 1024 aaPredicted RBP12.42□□□□□ -0.42
SV2C-203ENST00000506257 MAP3K9P80192 1104 aa12.38□□□□□ -0.43
SV2C-203ENST00000506257 SPNS2Q8IVW8 549 aa12.38□□□□□ -0.43
SV2C-203ENST00000506257 EMILIN3Q9NT22 766 aa12.36□□□□□ -0.43
SV2C-203ENST00000506257 EVI5O60447 810 aa12.33□□□□□ -0.44
SV2C-203ENST00000506257 PBX2P40425 430 aa12.33□□□□□ -0.44
SV2C-203ENST00000506257 CAMK2BQ13554 666 aa12.33□□□□□ -0.44
SV2C-203ENST00000506257 PPP4R3BQ5MIZ7 849 aa12.33□□□□□ -0.44
SV2C-203ENST00000506257 ANO8Q9HCE9 1232 aaPredicted RBP12.32□□□□□ -0.44
SV2C-203ENST00000506257 WDR70Q9NW82 654 aa12.32□□□□□ -0.44
SV2C-203ENST00000506257 MMRN1Q13201 1228 aa12.29□□□□□ -0.44
SV2C-203ENST00000506257 ANKRD13DQ6ZTN6 518 aa12.28□□□□□ -0.44
SV2C-203ENST00000506257 ZNF454Q8N9F8 522 aa12.28□□□□□ -0.44
SV2C-203ENST00000506257 AXIN2Q9Y2T1 843 aa12.28□□□□□ -0.44
SV2C-203ENST00000506257 ARHGAP33O14559 1287 aa12.27□□□□□ -0.45
SV2C-203ENST00000506257 LSM11P83369 360 aaKnown RBP eCLIP12.27□□□□□ -0.45
SV2C-203ENST00000506257 POTEEQ6S8J3 1075 aa12.27□□□□□ -0.45
SV2C-203ENST00000506257 TSHZ2Q9NRE2 1034 aa12.27□□□□□ -0.45
SV2C-203ENST00000506257 DPYSL4O14531 572 aa12.25□□□□□ -0.45
SV2C-203ENST00000506257 FOSBP53539 338 aa12.25□□□□□ -0.45
SV2C-203ENST00000506257 E2F4Q16254 413 aa12.24□□□□□ -0.45
SV2C-203ENST00000506257 JPH4Q96JJ6 628 aa12.23□□□□□ -0.45
SV2C-203ENST00000506257 KCNH8Q96L42 1107 aa12.22□□□□□ -0.45
SV2C-203ENST00000506257 PSEN2P49810 448 aa12.2□□□□□ -0.46
SV2C-203ENST00000506257 PTGER2P43116 358 aa12.19□□□□□ -0.46
SV2C-203ENST00000506257 PLCB2Q00722 1185 aa12.19□□□□□ -0.46
SV2C-203ENST00000506257 ZDHHC16Q969W1 377 aa12.19□□□□□ -0.46
SV2C-203ENST00000506257 BCL2L12Q9HB09 334 aa12.19□□□□□ -0.46
SV2C-203ENST00000506257 KCNK17Q96T54 332 aa12.18□□□□□ -0.46
SV2C-203ENST00000506257 DMRTA1Q5VZB9 504 aa12.16□□□□□ -0.46
SV2C-203ENST00000506257 SPDYE16A6NNV3 312 aaPredicted RBP12.15□□□□□ -0.46
SV2C-203ENST00000506257 PHF14O94880 888 aa12.15□□□□□ -0.46
SV2C-203ENST00000506257 PTPREP23469 700 aa12.15□□□□□ -0.46
SV2C-203ENST00000506257 MYT1LQ9UL68 1186 aa12.15□□□□□ -0.46
SV2C-203ENST00000506257 PCDHGA10Q9Y5H3 936 aa12.15□□□□□ -0.46
SV2C-203ENST00000506257 TK2O00142 265 aa12.14□□□□□ -0.47
SV2C-203ENST00000506257 ADGRD1Q6QNK2 874 aa12.14□□□□□ -0.47
SV2C-203ENST00000506257 ADAM33Q9BZ11 813 aa12.14□□□□□ -0.47
SV2C-203ENST00000506257 ARIH1Q9Y4X5 557 aaPredicted RBP12.14□□□□□ -0.47
SV2C-203ENST00000506257 TYW1BQ6NUM6 668 aa12.13□□□□□ -0.47
SV2C-203ENST00000506257 PDIA6Q15084 440 aa12.12□□□□□ -0.47
SV2C-203ENST00000506257 FBXW7Q969H0 707 aa12.12□□□□□ -0.47
SV2C-203ENST00000506257 RNF166Q96A37 237 aaPredicted RBP12.11□□□□□ -0.47
SV2C-203ENST00000506257 EPAS1Q99814 870 aa12.11□□□□□ -0.47
SV2C-203ENST00000506257 DDX12PQ92771 950 aa12.1□□□□□ -0.47
SV2C-203ENST00000506257 STAC3Q96MF2 364 aa12.06□□□□□ -0.48
SV2C-203ENST00000506257 SLC4A5Q9BY07 1137 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms