RNA–Protein interactions for RNA: ENST00000505874.1

LINC00616-202, long intergenic non-protein coding RNA 616, humanhuman

TSL 3

Gene LINC00616, Length 260 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00616-202ENST00000505874 HOXB3P14651 431 aaPredicted RBP11.65□□□□□ -0.54
LINC00616-202ENST00000505874 C2orf72A6NCS6 295 aa11.64□□□□□ -0.55
LINC00616-202ENST00000505874 TMC2Q8TDI7 906 aa11.63□□□□□ -0.55
LINC00616-202ENST00000505874 DOK7Q18PE1 504 aa11.62□□□□□ -0.55
LINC00616-202ENST00000505874 KIF3CO14782 793 aa11.61□□□□□ -0.55
LINC00616-202ENST00000505874 ZNF710Q8N1W2 664 aa11.61□□□□□ -0.55
LINC00616-202ENST00000505874 BBXQ8WY36 941 aaPredicted RBP11.61□□□□□ -0.55
LINC00616-202ENST00000505874 MARVELD3Q96A59 401 aa11.61□□□□□ -0.55
LINC00616-202ENST00000505874 RIMBP2O15034 1052 aa11.55□□□□□ -0.56
LINC00616-202ENST00000505874 EMP3P54852 163 aa11.54□□□□□ -0.56
LINC00616-202ENST00000505874 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.52□□□□□ -0.57
LINC00616-202ENST00000505874 GPHNQ9NQX3 736 aaPredicted RBP11.51□□□□□ -0.57
LINC00616-202ENST00000505874 HOXB1P14653 301 aaPredicted RBP11.5□□□□□ -0.57
LINC00616-202ENST00000505874 SPRYD3Q8NCJ5 442 aa11.49□□□□□ -0.57
LINC00616-202ENST00000505874 ZSWIM6Q9HCJ5 1215 aa11.49□□□□□ -0.57
LINC00616-202ENST00000505874 DSG2Q14126 1118 aa11.48□□□□□ -0.57
LINC00616-202ENST00000505874 ARSIQ5FYB1 569 aa11.48□□□□□ -0.57
LINC00616-202ENST00000505874 FAM205CA6NFA0 338 aa11.47□□□□□ -0.57
LINC00616-202ENST00000505874 FOXK1P85037 733 aa11.47□□□□□ -0.57
LINC00616-202ENST00000505874 GPR153Q6NV75 609 aa11.47□□□□□ -0.57
LINC00616-202ENST00000505874 PLPP6Q8IY26 295 aa11.47□□□□□ -0.57
LINC00616-202ENST00000505874 CFAP44Q96MT7 982 aa11.47□□□□□ -0.57
LINC00616-202ENST00000505874 CRISPLD2Q9H0B8 497 aa11.47□□□□□ -0.57
LINC00616-202ENST00000505874 NCKAP5LQ9HCH0 1330 aa11.46□□□□□ -0.57
LINC00616-202ENST00000505874 PAXIP1Q6ZW49 1069 aaPredicted RBP11.46□□□□□ -0.57
LINC00616-202ENST00000505874 KHSRPQ92945 711 aaKnown RBP eCLIP11.46□□□□□ -0.57
LINC00616-202ENST00000505874 CADPS2Q86UW7 1296 aa11.45□□□□□ -0.58
LINC00616-202ENST00000505874 CDAN1Q8IWY9 1227 aa11.45□□□□□ -0.58
LINC00616-202ENST00000505874 PDE4AP27815 886 aa11.44□□□□□ -0.58
LINC00616-202ENST00000505874 POTEB3A0JP26 581 aa11.43□□□□□ -0.58
LINC00616-202ENST00000505874 POTEBQ6S5H4 581 aa11.43□□□□□ -0.58
LINC00616-202ENST00000505874 HS3ST6Q96QI5 342 aa11.43□□□□□ -0.58
LINC00616-202ENST00000505874 ERBB3P21860 1342 aa11.42□□□□□ -0.58
LINC00616-202ENST00000505874 SLC34A2O95436 690 aa11.42□□□□□ -0.58
LINC00616-202ENST00000505874 LARP6Q9BRS8 491 aaKnown RBP11.42□□□□□ -0.58
LINC00616-202ENST00000505874 PCDH10Q9P2E7 1040 aa11.42□□□□□ -0.58
LINC00616-202ENST00000505874 PPP1R15BQ5SWA1 713 aa11.41□□□□□ -0.58
LINC00616-202ENST00000505874 PCDHGA4Q9Y5G9 962 aa11.41□□□□□ -0.58
LINC00616-202ENST00000505874 NUDT7P0C024 238 aa11.39□□□□□ -0.59
LINC00616-202ENST00000505874 VARS2Q5ST30 1063 aaKnown RBP11.37□□□□□ -0.59
LINC00616-202ENST00000505874 DDX27Q96GQ7 796 aaKnown RBP11.37□□□□□ -0.59
LINC00616-202ENST00000505874 PTCD2Q8WV60 388 aaKnown RBP11.35□□□□□ -0.59
LINC00616-202ENST00000505874 UPF1Q92900 1129 aaKnown RBP eCLIP11.35□□□□□ -0.59
LINC00616-202ENST00000505874 ZNF316A6NFI3 1004 aaPredicted RBP11.33□□□□□ -0.6
LINC00616-202ENST00000505874 MFSD10Q14728 455 aa11.33□□□□□ -0.6
LINC00616-202ENST00000505874 PLSCR2Q9NRY7 297 aa11.32□□□□□ -0.6
LINC00616-202ENST00000505874 TBC1D12O60347 775 aa11.31□□□□□ -0.6
LINC00616-202ENST00000505874 OXER1Q8TDS5 423 aa11.3□□□□□ -0.6
LINC00616-202ENST00000505874 LHX6Q9UPM6 363 aa11.3□□□□□ -0.6
LINC00616-202ENST00000505874 KRTAP3-3Q9BYR6 98 aa11.27□□□□□ -0.61
LINC00616-202ENST00000505874 KRTAP3-2Q9BYR7 98 aa11.27□□□□□ -0.61
LINC00616-202ENST00000505874 KDM4FA0A1W2PPD8 638 aa11.25□□□□□ -0.61
LINC00616-202ENST00000505874 ZNF687Q8N1G0 1237 aa11.25□□□□□ -0.61
LINC00616-202ENST00000505874 EMILIN3Q9NT22 766 aa11.24□□□□□ -0.61
LINC00616-202ENST00000505874 TSHZ2Q9NRE2 1034 aa11.22□□□□□ -0.61
LINC00616-202ENST00000505874 MAP3K9P80192 1104 aa11.21□□□□□ -0.61
LINC00616-202ENST00000505874 PSDA5PKW4 1024 aaPredicted RBP11.18□□□□□ -0.62
LINC00616-202ENST00000505874 EVI5O60447 810 aa11.18□□□□□ -0.62
LINC00616-202ENST00000505874 CAMK2BQ13554 666 aa11.18□□□□□ -0.62
LINC00616-202ENST00000505874 SPNS2Q8IVW8 549 aa11.16□□□□□ -0.62
LINC00616-202ENST00000505874 WDR70Q9NW82 654 aa11.16□□□□□ -0.62
LINC00616-202ENST00000505874 DPYSL4O14531 572 aa11.15□□□□□ -0.62
LINC00616-202ENST00000505874 AXIN2Q9Y2T1 843 aa11.15□□□□□ -0.62
LINC00616-202ENST00000505874 PPP4R3BQ5MIZ7 849 aa11.14□□□□□ -0.63
LINC00616-202ENST00000505874 PLCB2Q00722 1185 aa11.13□□□□□ -0.63
LINC00616-202ENST00000505874 ZNF454Q8N9F8 522 aa11.13□□□□□ -0.63
LINC00616-202ENST00000505874 PBX2P40425 430 aa11.12□□□□□ -0.63
LINC00616-202ENST00000505874 E2F4Q16254 413 aa11.12□□□□□ -0.63
LINC00616-202ENST00000505874 POTEEQ6S8J3 1075 aa11.12□□□□□ -0.63
LINC00616-202ENST00000505874 ANO8Q9HCE9 1232 aaPredicted RBP11.12□□□□□ -0.63
LINC00616-202ENST00000505874 ANKRD13DQ6ZTN6 518 aa11.11□□□□□ -0.63
LINC00616-202ENST00000505874 LSM11P83369 360 aaKnown RBP eCLIP11.1□□□□□ -0.63
LINC00616-202ENST00000505874 FOSBP53539 338 aa11.09□□□□□ -0.63
LINC00616-202ENST00000505874 ARHGAP33O14559 1287 aa11.07□□□□□ -0.64
LINC00616-202ENST00000505874 PSEN2P49810 448 aa11.07□□□□□ -0.64
LINC00616-202ENST00000505874 MMRN1Q13201 1228 aa11.07□□□□□ -0.64
LINC00616-202ENST00000505874 JPH4Q96JJ6 628 aa11.07□□□□□ -0.64
LINC00616-202ENST00000505874 KCNK17Q96T54 332 aa11.06□□□□□ -0.64
LINC00616-202ENST00000505874 DMRTA1Q5VZB9 504 aa11.03□□□□□ -0.64
LINC00616-202ENST00000505874 ZDHHC16Q969W1 377 aa11.03□□□□□ -0.64
LINC00616-202ENST00000505874 KCNH8Q96L42 1107 aa11.02□□□□□ -0.65
LINC00616-202ENST00000505874 ADAM33Q9BZ11 813 aa11.02□□□□□ -0.65
LINC00616-202ENST00000505874 BCL2L12Q9HB09 334 aa11.02□□□□□ -0.65
LINC00616-202ENST00000505874 PCDHGA10Q9Y5H3 936 aa11.02□□□□□ -0.65
LINC00616-202ENST00000505874 HAP1P54257 671 aaPredicted RBP11.01□□□□□ -0.65
LINC00616-202ENST00000505874 PDIA6Q15084 440 aa11□□□□□ -0.65
LINC00616-202ENST00000505874 DDX12PQ92771 950 aa11□□□□□ -0.65
LINC00616-202ENST00000505874 PHF14O94880 888 aa10.99□□□□□ -0.65
LINC00616-202ENST00000505874 SPDYE16A6NNV3 312 aaPredicted RBP10.98□□□□□ -0.65
LINC00616-202ENST00000505874 PTPREP23469 700 aa10.98□□□□□ -0.65
LINC00616-202ENST00000505874 TYW1BQ6NUM6 668 aa10.98□□□□□ -0.65
LINC00616-202ENST00000505874 ADGRD1Q6QNK2 874 aa10.97□□□□□ -0.65
LINC00616-202ENST00000505874 MYT1LQ9UL68 1186 aa10.97□□□□□ -0.65
LINC00616-202ENST00000505874 ARIH1Q9Y4X5 557 aaPredicted RBP10.97□□□□□ -0.65
LINC00616-202ENST00000505874 FBXW7Q969H0 707 aa10.96□□□□□ -0.65
LINC00616-202ENST00000505874 PTGER2P43116 358 aa10.95□□□□□ -0.66
LINC00616-202ENST00000505874 KCNV2Q8TDN2 545 aa10.95□□□□□ -0.66
LINC00616-202ENST00000505874 RNF166Q96A37 237 aaPredicted RBP10.94□□□□□ -0.66
LINC00616-202ENST00000505874 RBM33Q96EV2 1170 aaKnown RBP10.94□□□□□ -0.66
LINC00616-202ENST00000505874 EPAS1Q99814 870 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms