RNA–Protein interactions for RNA: ENST00000505020.1

CDH9-202, Transcript of cadherin 9, humanhuman

TSL 2

Gene CDH9, Length 1,836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-202ENST00000505020 STK25O00506 426 aa10.35□□□□□ -0.75
CDH9-202ENST00000505020 RETREG2Q8NC44 543 aa10.35□□□□□ -0.75
CDH9-202ENST00000505020 A6NJR5 290 aa10.35□□□□□ -0.75
CDH9-202ENST00000505020 MIER1Q8N108 512 aa10.35□□□□□ -0.75
CDH9-202ENST00000505020 ZNF777Q9ULD5 760 aaPredicted RBP10.32□□□□□ -0.76
CDH9-202ENST00000505020 CCDC27Q2M243 656 aa10.31□□□□□ -0.76
CDH9-202ENST00000505020 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.31□□□□□ -0.76
CDH9-202ENST00000505020 ARHGEF1Q92888 912 aaKnown RBP10.3□□□□□ -0.76
CDH9-202ENST00000505020 STAG3Q9UJ98 1225 aa10.3□□□□□ -0.76
CDH9-202ENST00000505020 CCDC136Q96JN2 1154 aa10.29□□□□□ -0.76
CDH9-202ENST00000505020 AMOTL2Q9Y2J4 779 aa10.29□□□□□ -0.76
CDH9-202ENST00000505020 FAM117AQ9C073 453 aa10.28□□□□□ -0.76
CDH9-202ENST00000505020 PRDM16Q9HAZ2 1276 aa10.28□□□□□ -0.76
CDH9-202ENST00000505020 RIOK3O14730 519 aaKnown RBP10.28□□□□□ -0.76
CDH9-202ENST00000505020 ONECUT3O60422 494 aaPredicted RBP10.27□□□□□ -0.77
CDH9-202ENST00000505020 KDM4AO75164 1064 aa10.27□□□□□ -0.77
CDH9-202ENST00000505020 DSG3P32926 999 aa10.27□□□□□ -0.77
CDH9-202ENST00000505020 ZNF526Q8TF50 670 aaPredicted RBP10.27□□□□□ -0.77
CDH9-202ENST00000505020 A0A0U1RQG5 324 aaPredicted RBP10.26□□□□□ -0.77
CDH9-202ENST00000505020 PDE4DQ08499 809 aa10.26□□□□□ -0.77
CDH9-202ENST00000505020 KRI1Q8N9T8 703 aaKnown RBP10.26□□□□□ -0.77
CDH9-202ENST00000505020 CCDC97Q96F63 343 aaPredicted RBP10.26□□□□□ -0.77
CDH9-202ENST00000505020 RYDENQ9NUL5 291 aaKnown RBP10.26□□□□□ -0.77
CDH9-202ENST00000505020 U3KPZ7 1027 aaPredicted RBP10.26□□□□□ -0.77
CDH9-202ENST00000505020 CADPSQ9ULU8 1353 aa10.24□□□□□ -0.77
CDH9-202ENST00000505020 SERPINA10Q9UK55 444 aa10.24□□□□□ -0.77
CDH9-202ENST00000505020 CANXP27824 592 aaKnown RBP10.23□□□□□ -0.77
CDH9-202ENST00000505020 TRIM66O15016 1216 aa10.22□□□□□ -0.77
CDH9-202ENST00000505020 MYT1LQ9UL68 1186 aa10.19□□□□□ -0.78
CDH9-202ENST00000505020 STK24Q9Y6E0 443 aa10.19□□□□□ -0.78
CDH9-202ENST00000505020 PLEKHG3A1L390 1219 aa10.19□□□□□ -0.78
CDH9-202ENST00000505020 SMARCA5O60264 1052 aaPredicted RBP10.19□□□□□ -0.78
CDH9-202ENST00000505020 IGSF5Q9NSI5 407 aa10.19□□□□□ -0.78
CDH9-202ENST00000505020 UNCXA6NJT0 531 aa10.17□□□□□ -0.78
CDH9-202ENST00000505020 NAP1L5Q96NT1 182 aaPredicted RBP10.17□□□□□ -0.78
CDH9-202ENST00000505020 TEX2Q8IWB9 1127 aa10.17□□□□□ -0.78
CDH9-202ENST00000505020 ZEB1P37275 1124 aaPredicted RBP10.16□□□□□ -0.78
CDH9-202ENST00000505020 SMYD5Q6GMV2 418 aa10.16□□□□□ -0.78
CDH9-202ENST00000505020 VGFO15240 615 aaPredicted RBP10.15□□□□□ -0.78
CDH9-202ENST00000505020 SPATA32Q96LK8 384 aa10.15□□□□□ -0.78
CDH9-202ENST00000505020 CHRDL2Q6WN34 429 aa10.14□□□□□ -0.79
CDH9-202ENST00000505020 PROSER2Q86WR7 435 aaPredicted RBP10.14□□□□□ -0.79
CDH9-202ENST00000505020 ANKRD13AQ8IZ07 590 aa10.14□□□□□ -0.79
CDH9-202ENST00000505020 E2F4Q16254 413 aa10.14□□□□□ -0.79
CDH9-202ENST00000505020 ARIH1Q9Y4X5 557 aaPredicted RBP10.12□□□□□ -0.79
CDH9-202ENST00000505020 PATL2C9JE40 543 aaKnown RBP10.11□□□□□ -0.79
CDH9-202ENST00000505020 NCLP19338 710 aaKnown RBP10.11□□□□□ -0.79
CDH9-202ENST00000505020 ZBTB47Q9UFB7 747 aaPredicted RBP10.11□□□□□ -0.79
CDH9-202ENST00000505020 CAPN15O75808 1086 aa10.1□□□□□ -0.79
CDH9-202ENST00000505020 GSE1Q14687 1217 aa10.1□□□□□ -0.79
CDH9-202ENST00000505020 NOL8Q76FK4 1167 aaKnown RBP10.1□□□□□ -0.79
CDH9-202ENST00000505020 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.09□□□□□ -0.79
CDH9-202ENST00000505020 LOC102724159A0A0B4J2E5 919 aa10.09□□□□□ -0.79
CDH9-202ENST00000505020 PWP2Q15269 919 aaKnown RBP10.09□□□□□ -0.79
CDH9-202ENST00000505020 RBM26Q5T8P6 1007 aaKnown RBP10.09□□□□□ -0.79
CDH9-202ENST00000505020 FNBP4Q8N3X1 1017 aaPredicted RBP10.09□□□□□ -0.79
CDH9-202ENST00000505020 SETQ01105 290 aaPredicted RBP10.08□□□□□ -0.8
CDH9-202ENST00000505020 MCM6Q14566 821 aa10.07□□□□□ -0.8
CDH9-202ENST00000505020 POM121Q96HA1 1249 aa10.07□□□□□ -0.8
CDH9-202ENST00000505020 DDRGK1Q96HY6 314 aa10.07□□□□□ -0.8
CDH9-202ENST00000505020 GPIHBP1Q8IV16 184 aa10.07□□□□□ -0.8
CDH9-202ENST00000505020 PLCD4Q9BRC7 762 aa10.07□□□□□ -0.8
CDH9-202ENST00000505020 RIPOR2Q9Y4F9 1068 aa10.07□□□□□ -0.8
CDH9-202ENST00000505020 PLEKHD1A6NEE1 506 aa10.06□□□□□ -0.8
CDH9-202ENST00000505020 PRDM10Q9NQV6 1147 aa10.06□□□□□ -0.8
CDH9-202ENST00000505020 KCNA1Q09470 495 aa10.05□□□□□ -0.8
CDH9-202ENST00000505020 EXOC8Q8IYI6 725 aa10.05□□□□□ -0.8
CDH9-202ENST00000505020 SPINK5Q9NQ38 1064 aaPredicted RBP10.04□□□□□ -0.8
CDH9-202ENST00000505020 BRD1O95696 1058 aa10.03□□□□□ -0.8
CDH9-202ENST00000505020 MAFGO15525 162 aa10.02□□□□□ -0.81
CDH9-202ENST00000505020 MARCH6O60337 910 aa10.01□□□□□ -0.81
CDH9-202ENST00000505020 ANAPC15P60006 121 aa10.01□□□□□ -0.81
CDH9-202ENST00000505020 ZC3H4Q9UPT8 1303 aaKnown RBP10.01□□□□□ -0.81
CDH9-202ENST00000505020 DRC1Q96MC2 740 aa10□□□□□ -0.81
CDH9-202ENST00000505020 ANKRD62A6NC57 917 aa10□□□□□ -0.81
CDH9-202ENST00000505020 PTMSP20962 102 aa10□□□□□ -0.81
CDH9-202ENST00000505020 SGIP1Q9BQI5 828 aa10□□□□□ -0.81
CDH9-202ENST00000505020 ACIN1Q9UKV3 1341 aaKnown RBP10□□□□□ -0.81
CDH9-202ENST00000505020 AAMPQ13685 434 aa9.99□□□□□ -0.81
CDH9-202ENST00000505020 DCAF8Q5TAQ9 597 aa9.99□□□□□ -0.81
CDH9-202ENST00000505020 HSP90AB4PQ58FF6 505 aa9.98□□□□□ -0.81
CDH9-202ENST00000505020 PPP1R15AO75807 674 aaPredicted RBP9.97□□□□□ -0.81
CDH9-202ENST00000505020 GOPCQ9HD26 462 aa9.96□□□□□ -0.81
CDH9-202ENST00000505020 KIAA1522Q9P206 1035 aaPredicted RBP9.96□□□□□ -0.81
CDH9-202ENST00000505020 RBM47A0AV96 593 aaKnown RBP9.96□□□□□ -0.82
CDH9-202ENST00000505020 SND1Q7KZF4 910 aaKnown RBP eCLIP9.96□□□□□ -0.82
CDH9-202ENST00000505020 SIRT1Q96EB6 747 aa9.96□□□□□ -0.82
CDH9-202ENST00000505020 HIRIP3Q9BW71 556 aaPredicted RBP9.96□□□□□ -0.82
CDH9-202ENST00000505020 MYH16Q9H6N6 1097 aa9.96□□□□□ -0.82
CDH9-202ENST00000505020 SREK1Q8WXA9 508 aaKnown RBP9.94□□□□□ -0.82
CDH9-202ENST00000505020 PPME1Q9Y570 386 aa9.94□□□□□ -0.82
CDH9-202ENST00000505020 CENPBP07199 599 aaPredicted RBP9.93□□□□□ -0.82
CDH9-202ENST00000505020 PCMTD1Q96MG8 357 aaPredicted RBP9.93□□□□□ -0.82
CDH9-202ENST00000505020 CNPY4Q8N129 248 aa9.93□□□□□ -0.82
CDH9-202ENST00000505020 RBM42Q9BTD8 480 aaKnown RBP9.93□□□□□ -0.82
CDH9-202ENST00000505020 IVNS1ABPQ9Y6Y0 642 aa9.93□□□□□ -0.82
CDH9-202ENST00000505020 TPD52L2O43399 206 aaKnown RBP9.92□□□□□ -0.82
CDH9-202ENST00000505020 MRRFQ96E11 262 aaKnown RBP9.92□□□□□ -0.82
CDH9-202ENST00000505020 MLLT3P42568 568 aaPredicted RBP9.91□□□□□ -0.82
CDH9-202ENST00000505020 NUBP1P53384 320 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms